RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, humanhuman

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-223ENST00000533979 TSGA10IPQ3SY00 556 aa9.33□□□□□ -0.92
ATM-223ENST00000533979 CCDC85AQ96PX6 553 aaPredicted RBP9.33□□□□□ -0.92
ATM-223ENST00000533979 RNF144AP50876 292 aaPredicted RBP9.32□□□□□ -0.92
ATM-223ENST00000533979 POM121Q96HA1 1249 aa9.32□□□□□ -0.92
ATM-223ENST00000533979 A0A1W2PRU2 124 aa9.31□□□□□ -0.92
ATM-223ENST00000533979 H3BM21 787 aa9.31□□□□□ -0.92
ATM-223ENST00000533979 SCTRP47872 440 aa9.31□□□□□ -0.92
ATM-223ENST00000533979 CDCA7Q9BWT1 371 aaPredicted RBP9.31□□□□□ -0.92
ATM-223ENST00000533979 ALG2Q9H553 416 aa9.31□□□□□ -0.92
ATM-223ENST00000533979 POLMQ9NP87 494 aaPredicted RBP9.31□□□□□ -0.92
ATM-223ENST00000533979 MAP7D1Q3KQU3 841 aa9.3□□□□□ -0.92
ATM-223ENST00000533979 CYP2U1Q7Z449 544 aa9.3□□□□□ -0.92
ATM-223ENST00000533979 RNF135Q8IUD6 432 aa9.3□□□□□ -0.92
ATM-223ENST00000533979 IRF7Q92985 503 aa9.3□□□□□ -0.92
ATM-223ENST00000533979 SIRT1Q96EB6 747 aa9.3□□□□□ -0.92
ATM-223ENST00000533979 OSBPL3Q9H4L5 887 aa9.3□□□□□ -0.92
ATM-223ENST00000533979 MYCP01106 439 aaPredicted RBP9.29□□□□□ -0.92
ATM-223ENST00000533979 GNRH1P01148 92 aa9.29□□□□□ -0.92
ATM-223ENST00000533979 GPC1P35052 558 aa9.29□□□□□ -0.92
ATM-223ENST00000533979 PPFIA3O75145 1194 aa9.28□□□□□ -0.92
ATM-223ENST00000533979 PTSQ03393 145 aa9.28□□□□□ -0.92
ATM-223ENST00000533979 RNF217Q8TC41 542 aa9.28□□□□□ -0.92
ATM-223ENST00000533979 WIPF1O43516 503 aa9.27□□□□□ -0.93
ATM-223ENST00000533979 DOLKQ9UPQ8 538 aa9.27□□□□□ -0.93
ATM-223ENST00000533979 SLC35F4A4IF30 521 aa9.26□□□□□ -0.93
ATM-223ENST00000533979 LZTS3O60299 673 aaPredicted RBP9.26□□□□□ -0.93
ATM-223ENST00000533979 VEGFBP49765 207 aa9.26□□□□□ -0.93
ATM-223ENST00000533979 CLN3Q13286 438 aa9.26□□□□□ -0.93
ATM-223ENST00000533979 FOXD4L5Q5VV16 416 aaPredicted RBP9.26□□□□□ -0.93
ATM-223ENST00000533979 LYSMD3Q7Z3D4 306 aa9.26□□□□□ -0.93
ATM-223ENST00000533979 NLRP3Q96P20 1036 aa9.26□□□□□ -0.93
ATM-223ENST00000533979 GRIP2Q9C0E4 1043 aa9.26□□□□□ -0.93
ATM-223ENST00000533979 MEN1O00255 615 aa9.25□□□□□ -0.93
ATM-223ENST00000533979 LCE2CQ5TA81 110 aa9.25□□□□□ -0.93
ATM-223ENST00000533979 CCDC155Q8N6L0 562 aa9.24□□□□□ -0.93
ATM-223ENST00000533979 PLPP7Q8NBV4 271 aa9.24□□□□□ -0.93
ATM-223ENST00000533979 XAGE2Q96GT9 111 aa9.24□□□□□ -0.93
ATM-223ENST00000533979 ESYT1Q9BSJ8 1104 aa9.24□□□□□ -0.93
ATM-223ENST00000533979 VSIG8P0DPA2 414 aa9.23□□□□□ -0.93
ATM-223ENST00000533979 FNBP4Q8N3X1 1017 aaPredicted RBP9.23□□□□□ -0.93
ATM-223ENST00000533979 NFATC2IPQ8NCF5 419 aa9.23□□□□□ -0.93
ATM-223ENST00000533979 NANOS1Q8WY41 292 aaKnown RBP9.23□□□□□ -0.93
ATM-223ENST00000533979 A6NJR5 290 aa9.22□□□□□ -0.93
ATM-223ENST00000533979 CENPCQ03188 943 aa9.22□□□□□ -0.93
ATM-223ENST00000533979 WDR44Q5JSH3 913 aa9.22□□□□□ -0.93
ATM-223ENST00000533979 HDGFL1Q5TGJ6 251 aa9.22□□□□□ -0.93
ATM-223ENST00000533979 PRICKLE2Q7Z3G6 844 aa9.22□□□□□ -0.93
ATM-223ENST00000533979 CNKSR1Q969H4 720 aa9.22□□□□□ -0.93
ATM-223ENST00000533979 ESCO1Q5FWF5 840 aa9.21□□□□□ -0.94
ATM-223ENST00000533979 SLC27A3Q5K4L6 730 aa9.21□□□□□ -0.94
ATM-223ENST00000533979 CLUAP1Q96AJ1 413 aa9.21□□□□□ -0.94
ATM-223ENST00000533979 ARHGEF10LQ9HCE6 1279 aa9.21□□□□□ -0.94
ATM-223ENST00000533979 HRH3Q9Y5N1 445 aa9.21□□□□□ -0.94
ATM-223ENST00000533979 ERBB4Q15303 1308 aa9.21□□□□□ -0.94
ATM-223ENST00000533979 GMPRP36959 345 aa9.2□□□□□ -0.94
ATM-223ENST00000533979 OXLD1Q5BKU9 147 aa9.2□□□□□ -0.94
ATM-223ENST00000533979 SENP3-EIF4A1A0A087X0R7 540 aa9.19□□□□□ -0.94
ATM-223ENST00000533979 POM121CA8CG34 1229 aa9.19□□□□□ -0.94
ATM-223ENST00000533979 SPATA31C2B4DYI2 1134 aa9.19□□□□□ -0.94
ATM-223ENST00000533979 IL2RAP01589 272 aa9.19□□□□□ -0.94
ATM-223ENST00000533979 INSM1Q01101 510 aaPredicted RBP9.19□□□□□ -0.94
ATM-223ENST00000533979 PIK3CDO00329 1044 aa9.18□□□□□ -0.94
ATM-223ENST00000533979 SKIP12755 728 aa9.18□□□□□ -0.94
ATM-223ENST00000533979 ITGA6P23229 1130 aa9.18□□□□□ -0.94
ATM-223ENST00000533979 POU4F2Q12837 409 aa9.18□□□□□ -0.94
ATM-223ENST00000533979 PROSER2Q86WR7 435 aaPredicted RBP9.17□□□□□ -0.94
ATM-223ENST00000533979 EML3Q32P44 896 aa9.16□□□□□ -0.94
ATM-223ENST00000533979 ADAMTS19Q8TE59 1207 aa9.16□□□□□ -0.94
ATM-223ENST00000533979 GMCL1Q96IK5 515 aa9.16□□□□□ -0.94
ATM-223ENST00000533979 RAB6BQ9NRW1 208 aa9.16□□□□□ -0.94
ATM-223ENST00000533979 DYRK1BQ9Y463 629 aa9.16□□□□□ -0.94
ATM-223ENST00000533979 PCDHGA11Q9Y5H2 935 aa9.16□□□□□ -0.94
ATM-223ENST00000533979 INHAP05111 366 aa9.15□□□□□ -0.94
ATM-223ENST00000533979 RHOQP17081 205 aa9.15□□□□□ -0.94
ATM-223ENST00000533979 NBPF10Q6P3W6 841 aaKnown RBP9.15□□□□□ -0.94
ATM-223ENST00000533979 SV2AQ7L0J3 742 aa9.15□□□□□ -0.94
ATM-223ENST00000533979 VWA5B2Q8N398 1253 aa9.15□□□□□ -0.94
ATM-223ENST00000533979 NBPF15Q8N660 670 aa9.15□□□□□ -0.94
ATM-223ENST00000533979 GPR161Q8N6U8 529 aaKnown RBP9.15□□□□□ -0.94
ATM-223ENST00000533979 ZSCAN10Q96SZ4 725 aaPredicted RBP9.15□□□□□ -0.94
ATM-223ENST00000533979 ETNK1Q9HBU6 452 aa9.15□□□□□ -0.94
ATM-223ENST00000533979 NOD1Q9Y239 953 aa9.15□□□□□ -0.94
ATM-223ENST00000533979 WASLO00401 505 aaPredicted RBP9.14□□□□□ -0.95
ATM-223ENST00000533979 TAS1R3Q7RTX0 852 aa9.14□□□□□ -0.95
ATM-223ENST00000533979 FHDC1Q9C0D6 1143 aaPredicted RBP9.14□□□□□ -0.95
ATM-223ENST00000533979 GTF2E1P29083 439 aaPredicted RBP9.13□□□□□ -0.95
ATM-223ENST00000533979 PPARGC1BQ86YN6 1023 aaKnown RBP9.13□□□□□ -0.95
ATM-223ENST00000533979 SLC4A9Q96Q91 983 aa9.13□□□□□ -0.95
ATM-223ENST00000533979 SCNN1DP51172 638 aa9.12□□□□□ -0.95
ATM-223ENST00000533979 GDF10P55107 478 aa9.12□□□□□ -0.95
ATM-223ENST00000533979 NCOA4Q13772 614 aa9.12□□□□□ -0.95
ATM-223ENST00000533979 TMEM214Q6NUQ4 689 aaKnown RBP9.12□□□□□ -0.95
ATM-223ENST00000533979 PLEKHM2Q8IWE5 1019 aa9.12□□□□□ -0.95
ATM-223ENST00000533979 TIMMDC1Q9NPL8 285 aa9.12□□□□□ -0.95
ATM-223ENST00000533979 ATP9BO43861 1147 aa9.11□□□□□ -0.95
ATM-223ENST00000533979 SMTNP53814 917 aa9.11□□□□□ -0.95
ATM-223ENST00000533979 TBC1D9Q6ZT07 1266 aa9.11□□□□□ -0.95
ATM-223ENST00000533979 TRIM22Q8IYM9 498 aa9.11□□□□□ -0.95
ATM-223ENST00000533979 USP17L5A8MUK1 530 aa9.1□□□□□ -0.95
ATM-223ENST00000533979 TMEM229AB2RXF0 380 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms