RNA–Protein interactions for RNA: ENST00000533811.1

PACS1-214, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-214ENST00000533811 GRIN3BO60391 1043 aa13.16□□□□□ -0.3
PACS1-214ENST00000533811 YBX3P16989 372 aaKnown RBP eCLIP13.16□□□□□ -0.3
PACS1-214ENST00000533811 MSL1Q68DK7 614 aa13.16□□□□□ -0.3
PACS1-214ENST00000533811 CCNL1Q9UK58 526 aaPredicted RBP13.16□□□□□ -0.3
PACS1-214ENST00000533811 EDC4Q6P2E9 1401 aaKnown RBP13.15□□□□□ -0.3
PACS1-214ENST00000533811 GOLGB1Q14789 3259 aaKnown RBP13.15□□□□□ -0.3
PACS1-214ENST00000533811 IP6K1Q92551 441 aa13.15□□□□□ -0.3
PACS1-214ENST00000533811 SLC12A5Q9H2X9 1139 aa13.15□□□□□ -0.3
PACS1-214ENST00000533811 ANKRD36BQ8N2N9 1353 aa13.15□□□□□ -0.3
PACS1-214ENST00000533811 ATP10DQ9P241 1426 aa13.13□□□□□ -0.31
PACS1-214ENST00000533811 A0A1W2PP64 1363 aa13.13□□□□□ -0.31
PACS1-214ENST00000533811 COL23A1Q86Y22 540 aaPredicted RBP13.13□□□□□ -0.31
PACS1-214ENST00000533811 ZCRB1Q8TBF4 217 aaKnown RBP13.13□□□□□ -0.31
PACS1-214ENST00000533811 ZNF526Q8TF50 670 aaPredicted RBP13.13□□□□□ -0.31
PACS1-214ENST00000533811 TERF2IPQ9NYB0 399 aa13.13□□□□□ -0.31
PACS1-214ENST00000533811 NSD2O96028 1365 aa13.12□□□□□ -0.31
PACS1-214ENST00000533811 USP47Q96K76 1375 aa13.12□□□□□ -0.31
PACS1-214ENST00000533811 AMPHP49418 695 aa13.12□□□□□ -0.31
PACS1-214ENST00000533811 CARD11Q9BXL7 1154 aa13.12□□□□□ -0.31
PACS1-214ENST00000533811 GPBP1L1Q9HC44 474 aaPredicted RBP13.11□□□□□ -0.31
PACS1-214ENST00000533811 MEGF6O75095 1541 aa13.11□□□□□ -0.31
PACS1-214ENST00000533811 C5P01031 1676 aa13.11□□□□□ -0.31
PACS1-214ENST00000533811 FBLN1P23142 703 aa13.1□□□□□ -0.31
PACS1-214ENST00000533811 COG3Q96JB2 828 aa13.1□□□□□ -0.31
PACS1-214ENST00000533811 WWC3Q9ULE0 1092 aa13.1□□□□□ -0.31
PACS1-214ENST00000533811 MAP3K19Q56UN5 1328 aa13.1□□□□□ -0.31
PACS1-214ENST00000533811 HOXC9P31274 260 aa13.09□□□□□ -0.31
PACS1-214ENST00000533811 USHBP1Q8N6Y0 703 aa13.09□□□□□ -0.31
PACS1-214ENST00000533811 CEP350Q5VT06 3117 aa13.08□□□□□ -0.32
PACS1-214ENST00000533811 TAF1LQ8IZX4 1826 aa13.08□□□□□ -0.32
PACS1-214ENST00000533811 RRS1Q15050 365 aaKnown RBP13.06□□□□□ -0.32
PACS1-214ENST00000533811 RAPGEF4Q8WZA2 1011 aa13.06□□□□□ -0.32
PACS1-214ENST00000533811 CD2APQ9Y5K6 639 aa13.06□□□□□ -0.32
PACS1-214ENST00000533811 PHF14O94880 888 aa13.05□□□□□ -0.32
PACS1-214ENST00000533811 HSPA6P17066 643 aa13.05□□□□□ -0.32
PACS1-214ENST00000533811 NBPF6Q5VWK0 638 aa13.05□□□□□ -0.32
PACS1-214ENST00000533811 NBPF4Q96M43 638 aa13.05□□□□□ -0.32
PACS1-214ENST00000533811 PALLDQ8WX93 1383 aa13.05□□□□□ -0.32
PACS1-214ENST00000533811 SMG6Q86US8 1419 aaKnown RBP13.05□□□□□ -0.32
PACS1-214ENST00000533811 TATP17735 454 aaPredicted RBP13.04□□□□□ -0.32
PACS1-214ENST00000533811 MPRIPQ6WCQ1 1025 aa13.04□□□□□ -0.32
PACS1-214ENST00000533811 FLAD1Q8NFF5 587 aa13.04□□□□□ -0.32
PACS1-214ENST00000533811 AK7Q96M32 723 aa13.04□□□□□ -0.32
PACS1-214ENST00000533811 IGSF1Q8N6C5 1336 aa13.04□□□□□ -0.32
PACS1-214ENST00000533811 C4BP0C0L5 1744 aa13.04□□□□□ -0.32
PACS1-214ENST00000533811 ITGB4P16144 1822 aa13.04□□□□□ -0.32
PACS1-214ENST00000533811 SMIM5Q71RC9 77 aa13.03□□□□□ -0.32
PACS1-214ENST00000533811 RTL1A6NKG5 1358 aa13.03□□□□□ -0.32
PACS1-214ENST00000533811 ADCY9O60503 1353 aa13.03□□□□□ -0.32
PACS1-214ENST00000533811 UBR3Q6ZT12 1888 aa13.02□□□□□ -0.32
PACS1-214ENST00000533811 CGNL1Q0VF96 1302 aa13.02□□□□□ -0.33
PACS1-214ENST00000533811 PCDH11XQ9BZA7 1347 aa13.02□□□□□ -0.33
PACS1-214ENST00000533811 PCDH11YQ9BZA8 1340 aa13.02□□□□□ -0.33
PACS1-214ENST00000533811 TOGARAM1Q9Y4F4 1720 aa13.02□□□□□ -0.33
PACS1-214ENST00000533811 GGNBP2Q9H3C7 697 aa13.01□□□□□ -0.33
PACS1-214ENST00000533811 HMGB2P26583 209 aaKnown RBP13□□□□□ -0.33
PACS1-214ENST00000533811 AMIGO3Q86WK7 504 aa13□□□□□ -0.33
PACS1-214ENST00000533811 PUS7Q96PZ0 661 aaKnown RBP13□□□□□ -0.33
PACS1-214ENST00000533811 TONSLQ96HA7 1378 aa12.99□□□□□ -0.33
PACS1-214ENST00000533811 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.99□□□□□ -0.33
PACS1-214ENST00000533811 SMARCC1Q92922 1105 aaPredicted RBP12.99□□□□□ -0.33
PACS1-214ENST00000533811 KIF20BQ96Q89 1820 aa12.99□□□□□ -0.33
PACS1-214ENST00000533811 NSD3Q9BZ95 1437 aa12.98□□□□□ -0.33
PACS1-214ENST00000533811 ST20-MTHFSA0A0A6YYL1 179 aa12.98□□□□□ -0.33
PACS1-214ENST00000533811 HSP90AB2PQ58FF8 381 aa12.98□□□□□ -0.33
PACS1-214ENST00000533811 CYP27B1O15528 508 aa12.97□□□□□ -0.33
PACS1-214ENST00000533811 N4BP2Q86UW6 1770 aaPredicted RBP12.97□□□□□ -0.33
PACS1-214ENST00000533811 KIF3CO14782 793 aa12.96□□□□□ -0.33
PACS1-214ENST00000533811 FYB1O15117 783 aa12.96□□□□□ -0.33
PACS1-214ENST00000533811 LINC00116Q8NCU8 138 aa12.96□□□□□ -0.33
PACS1-214ENST00000533811 TESK2Q96S53 571 aa12.96□□□□□ -0.33
PACS1-214ENST00000533811 PKD1L3Q7Z443 1732 aa12.96□□□□□ -0.34
PACS1-214ENST00000533811 INSRP06213 1382 aa12.95□□□□□ -0.34
PACS1-214ENST00000533811 FLT4P35916 1363 aa12.95□□□□□ -0.34
PACS1-214ENST00000533811 GNPATO15228 680 aa12.95□□□□□ -0.34
PACS1-214ENST00000533811 SSFA2P28290 1259 aa12.95□□□□□ -0.34
PACS1-214ENST00000533811 PIGBQ92521 554 aa12.95□□□□□ -0.34
PACS1-214ENST00000533811 MAP2P11137 1827 aaKnown RBP12.95□□□□□ -0.34
PACS1-214ENST00000533811 LOC102724428A0A0B4J2F2 783 aa12.94□□□□□ -0.34
PACS1-214ENST00000533811 APLP1P51693 650 aa12.94□□□□□ -0.34
PACS1-214ENST00000533811 SIK1P57059 783 aa12.94□□□□□ -0.34
PACS1-214ENST00000533811 BCS1LQ9Y276 419 aa12.94□□□□□ -0.34
PACS1-214ENST00000533811 CICQ96RK0 1608 aaPredicted RBP12.93□□□□□ -0.34
PACS1-214ENST00000533811 PPM1GO15355 546 aaPredicted RBP12.93□□□□□ -0.34
PACS1-214ENST00000533811 MMP10P09238 476 aa12.93□□□□□ -0.34
PACS1-214ENST00000533811 TMOD3Q9NYL9 352 aa12.93□□□□□ -0.34
PACS1-214ENST00000533811 EMILIN1Q9Y6C2 1016 aa12.93□□□□□ -0.34
PACS1-214ENST00000533811 ATP6V1AP38606 617 aa12.92□□□□□ -0.34
PACS1-214ENST00000533811 SPG7Q9UQ90 795 aa12.92□□□□□ -0.34
PACS1-214ENST00000533811 PXDNLA1KZ92 1463 aa12.91□□□□□ -0.34
PACS1-214ENST00000533811 KIF13BQ9NQT8 1826 aa12.91□□□□□ -0.34
PACS1-214ENST00000533811 SLC24A1O60721 1099 aa12.91□□□□□ -0.34
PACS1-214ENST00000533811 TMF1P82094 1093 aa12.91□□□□□ -0.34
PACS1-214ENST00000533811 ITPK1Q13572 414 aa12.91□□□□□ -0.34
PACS1-214ENST00000533811 ARHGAP27Q6ZUM4 889 aa12.91□□□□□ -0.34
PACS1-214ENST00000533811 ASAP1Q9ULH1 1129 aa12.91□□□□□ -0.34
PACS1-214ENST00000533811 KIAA1551Q9HCM1 1747 aa12.91□□□□□ -0.34
PACS1-214ENST00000533811 A0A0G2JLW4 131 aa12.9□□□□□ -0.34
PACS1-214ENST00000533811 TOMM70O94826 608 aa12.9□□□□□ -0.34
PACS1-214ENST00000533811 NMRK2Q9NPI5 230 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms