RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 PANK3Q9H999 370 aa14.38□□□□□ -0.11
CAPN1-225ENST00000533704 SRCAPQ6ZRS2 3230 aa14.37□□□□□ -0.11
CAPN1-225ENST00000533704 TXNRD1Q16881 649 aa14.37□□□□□ -0.11
CAPN1-225ENST00000533704 ZCRB1Q8TBF4 217 aaKnown RBP14.37□□□□□ -0.11
CAPN1-225ENST00000533704 RAPGEF4Q8WZA2 1011 aa14.37□□□□□ -0.11
CAPN1-225ENST00000533704 SYTL4Q96C24 671 aaPredicted RBP14.37□□□□□ -0.11
CAPN1-225ENST00000533704 KIF24Q5T7B8 1368 aa14.36□□□□□ -0.11
CAPN1-225ENST00000533704 PROM2Q8N271 834 aa14.36□□□□□ -0.11
CAPN1-225ENST00000533704 ANO8Q9HCE9 1232 aaPredicted RBP14.36□□□□□ -0.11
CAPN1-225ENST00000533704 TATP17735 454 aaPredicted RBP14.35□□□□□ -0.11
CAPN1-225ENST00000533704 STK32BQ9NY57 414 aa14.34□□□□□ -0.11
CAPN1-225ENST00000533704 PRIM1P49642 420 aaKnown RBP14.33□□□□□ -0.12
CAPN1-225ENST00000533704 CASZ1Q86V15 1759 aa14.32□□□□□ -0.12
CAPN1-225ENST00000533704 POLKQ9UBT6 870 aa14.32□□□□□ -0.12
CAPN1-225ENST00000533704 MORC1Q86VD1 984 aa14.31□□□□□ -0.12
CAPN1-225ENST00000533704 KNSTRNQ9Y448 316 aa14.31□□□□□ -0.12
CAPN1-225ENST00000533704 PKD1L3Q7Z443 1732 aa14.31□□□□□ -0.12
CAPN1-225ENST00000533704 KIF7Q2M1P5 1343 aa14.31□□□□□ -0.12
CAPN1-225ENST00000533704 WASHC2AQ641Q2 1341 aa14.31□□□□□ -0.12
CAPN1-225ENST00000533704 ITGB4P16144 1822 aa14.3□□□□□ -0.12
CAPN1-225ENST00000533704 SPON1Q9HCB6 807 aa14.3□□□□□ -0.12
CAPN1-225ENST00000533704 PPP1R1BQ9UD71 204 aaPredicted RBP14.3□□□□□ -0.12
CAPN1-225ENST00000533704 PCDH11XQ9BZA7 1347 aa14.3□□□□□ -0.12
CAPN1-225ENST00000533704 PCDH11YQ9BZA8 1340 aa14.3□□□□□ -0.12
CAPN1-225ENST00000533704 SLC15A2Q16348 729 aa14.29□□□□□ -0.12
CAPN1-225ENST00000533704 EYA1Q99502 592 aa14.29□□□□□ -0.12
CAPN1-225ENST00000533704 PDGFDQ9GZP0 370 aaPredicted RBP14.29□□□□□ -0.12
CAPN1-225ENST00000533704 NSD2O96028 1365 aa14.29□□□□□ -0.12
CAPN1-225ENST00000533704 LY75O60449 1722 aa14.29□□□□□ -0.12
CAPN1-225ENST00000533704 ZBTB7AO95365 584 aa14.28□□□□□ -0.12
CAPN1-225ENST00000533704 PAPPAQ13219 1627 aa14.28□□□□□ -0.12
CAPN1-225ENST00000533704 EIF4A2Q14240 407 aaKnown RBP14.28□□□□□ -0.12
CAPN1-225ENST00000533704 TOGARAM1Q9Y4F4 1720 aa14.27□□□□□ -0.12
CAPN1-225ENST00000533704 KCNQ4P56696 695 aa14.27□□□□□ -0.13
CAPN1-225ENST00000533704 TUBGCP6Q96RT7 1819 aa14.27□□□□□ -0.13
CAPN1-225ENST00000533704 CYP27B1O15528 508 aa14.26□□□□□ -0.13
CAPN1-225ENST00000533704 CNGB1Q14028 1251 aaPredicted RBP14.26□□□□□ -0.13
CAPN1-225ENST00000533704 LRRC4BQ9NT99 713 aa14.26□□□□□ -0.13
CAPN1-225ENST00000533704 SPG7Q9UQ90 795 aa14.26□□□□□ -0.13
CAPN1-225ENST00000533704 ATF5Q9Y2D1 282 aaPredicted RBP14.26□□□□□ -0.13
CAPN1-225ENST00000533704 NCAPD2Q15021 1401 aa14.25□□□□□ -0.13
CAPN1-225ENST00000533704 ZNF827Q17R98 1081 aa14.25□□□□□ -0.13
CAPN1-225ENST00000533704 MPRIPQ6WCQ1 1025 aa14.25□□□□□ -0.13
CAPN1-225ENST00000533704 SLC27A3Q5K4L6 730 aa14.24□□□□□ -0.13
CAPN1-225ENST00000533704 CCNL1Q9UK58 526 aaPredicted RBP14.24□□□□□ -0.13
CAPN1-225ENST00000533704 CC2D1BQ5T0F9 858 aaKnown RBP14.23□□□□□ -0.13
CAPN1-225ENST00000533704 QSER1Q2KHR3 1735 aa14.23□□□□□ -0.13
CAPN1-225ENST00000533704 TAF1LQ8IZX4 1826 aa14.22□□□□□ -0.13
CAPN1-225ENST00000533704 AMER1Q5JTC6 1135 aaPredicted RBP14.22□□□□□ -0.13
CAPN1-225ENST00000533704 C5P01031 1676 aa14.22□□□□□ -0.13
CAPN1-225ENST00000533704 IGSF1Q8N6C5 1336 aa14.21□□□□□ -0.13
CAPN1-225ENST00000533704 TFCP2L1Q9NZI6 479 aa14.21□□□□□ -0.13
CAPN1-225ENST00000533704 IFNL2Q8IZJ0 200 aa14.2□□□□□ -0.14
CAPN1-225ENST00000533704 AKT1S1Q96B36 256 aa14.2□□□□□ -0.14
CAPN1-225ENST00000533704 MTFR1LQ9H019 292 aa14.2□□□□□ -0.14
CAPN1-225ENST00000533704 PALLDQ8WX93 1383 aa14.2□□□□□ -0.14
CAPN1-225ENST00000533704 MSH5O43196 834 aa14.19□□□□□ -0.14
CAPN1-225ENST00000533704 PHKG2P15735 406 aa14.19□□□□□ -0.14
CAPN1-225ENST00000533704 AEBP1Q8IUX7 1158 aa14.19□□□□□ -0.14
CAPN1-225ENST00000533704 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.19□□□□□ -0.14
CAPN1-225ENST00000533704 PTGER2P43116 358 aa14.18□□□□□ -0.14
CAPN1-225ENST00000533704 NKX1-1Q15270 411 aaPredicted RBP14.18□□□□□ -0.14
CAPN1-225ENST00000533704 PIGBQ92521 554 aa14.18□□□□□ -0.14
CAPN1-225ENST00000533704 TMOD3Q9NYL9 352 aa14.18□□□□□ -0.14
CAPN1-225ENST00000533704 PNPLA7Q6ZV29 1317 aa14.17□□□□□ -0.14
CAPN1-225ENST00000533704 PER1O15534 1290 aaPredicted RBP14.17□□□□□ -0.14
CAPN1-225ENST00000533704 MTHFSP49914 203 aa14.17□□□□□ -0.14
CAPN1-225ENST00000533704 PLEKHO1Q53GL0 409 aaPredicted RBP14.17□□□□□ -0.14
CAPN1-225ENST00000533704 SULT6B1Q6IMI4 303 aa14.17□□□□□ -0.14
CAPN1-225ENST00000533704 ZNF530Q6P9A1 599 aaPredicted RBP14.17□□□□□ -0.14
CAPN1-225ENST00000533704 SMARCC1Q92922 1105 aaPredicted RBP14.17□□□□□ -0.14
CAPN1-225ENST00000533704 VIRMAQ69YN4 1812 aaKnown RBP14.17□□□□□ -0.14
CAPN1-225ENST00000533704 DCAF8L1A6NGE4 600 aa14.16□□□□□ -0.14
CAPN1-225ENST00000533704 IL13P35225 146 aa14.15□□□□□ -0.14
CAPN1-225ENST00000533704 KLHL34Q8N239 644 aa14.15□□□□□ -0.14
CAPN1-225ENST00000533704 C4BP0C0L5 1744 aa14.15□□□□□ -0.14
CAPN1-225ENST00000533704 C1orf141Q5JVX7 400 aa14.14□□□□□ -0.15
CAPN1-225ENST00000533704 ARXQ96QS3 562 aa14.14□□□□□ -0.15
CAPN1-225ENST00000533704 FHDC1Q9C0D6 1143 aaPredicted RBP14.14□□□□□ -0.15
CAPN1-225ENST00000533704 ASAP1Q9ULH1 1129 aa14.14□□□□□ -0.15
CAPN1-225ENST00000533704 UBR3Q6ZT12 1888 aa14.14□□□□□ -0.15
CAPN1-225ENST00000533704 HSP90AB1P08238 724 aaKnown RBP14.13□□□□□ -0.15
CAPN1-225ENST00000533704 HMOX1P09601 288 aa14.13□□□□□ -0.15
CAPN1-225ENST00000533704 POLD1P28340 1107 aa14.13□□□□□ -0.15
CAPN1-225ENST00000533704 AMOTQ4VCS5 1084 aa14.13□□□□□ -0.15
CAPN1-225ENST00000533704 SLC16A10Q8TF71 515 aa14.13□□□□□ -0.15
CAPN1-225ENST00000533704 AK7Q96M32 723 aa14.13□□□□□ -0.15
CAPN1-225ENST00000533704 SGIP1Q9BQI5 828 aa14.13□□□□□ -0.15
CAPN1-225ENST00000533704 PLEKHG2Q9H7P9 1386 aa14.12□□□□□ -0.15
CAPN1-225ENST00000533704 SCN11AQ9UI33 1791 aa14.12□□□□□ -0.15
CAPN1-225ENST00000533704 DIAPH1O60610 1272 aaKnown RBP14.12□□□□□ -0.15
CAPN1-225ENST00000533704 COL23A1Q86Y22 540 aaPredicted RBP14.12□□□□□ -0.15
CAPN1-225ENST00000533704 COL24A1Q17RW2 1714 aa14.12□□□□□ -0.15
CAPN1-225ENST00000533704 LOC102724428A0A0B4J2F2 783 aa14.11□□□□□ -0.15
CAPN1-225ENST00000533704 KDM6AO15550 1401 aaPredicted RBP14.11□□□□□ -0.15
CAPN1-225ENST00000533704 PHF14O94880 888 aa14.11□□□□□ -0.15
CAPN1-225ENST00000533704 SIK1P57059 783 aa14.11□□□□□ -0.15
CAPN1-225ENST00000533704 CABP4P57796 275 aa14.11□□□□□ -0.15
CAPN1-225ENST00000533704 MSL1Q68DK7 614 aa14.11□□□□□ -0.15
CAPN1-225ENST00000533704 DCAF5Q96JK2 942 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms