RNA–Protein interactions for RNA: ENST00000533678.1

RDX-214, Transcript of radixin, humanhuman

TSL 4

Gene RDX, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-214ENST00000533678 RGPD4Q7Z3J3 1758 aa22.33■■□□□ 1.17
RDX-214ENST00000533678 TATP17735 454 aaPredicted RBP22.33■■□□□ 1.17
RDX-214ENST00000533678 ZCRB1Q8TBF4 217 aaKnown RBP22.33■■□□□ 1.17
RDX-214ENST00000533678 NCAPD2Q15021 1401 aa22.32■■□□□ 1.16
RDX-214ENST00000533678 MEGF6O75095 1541 aa22.31■■□□□ 1.16
RDX-214ENST00000533678 PLSCR1O15162 318 aa22.31■■□□□ 1.16
RDX-214ENST00000533678 USHBP1Q8N6Y0 703 aa22.31■■□□□ 1.16
RDX-214ENST00000533678 NHSQ6T4R5 1651 aa22.3■■□□□ 1.16
RDX-214ENST00000533678 DDX54Q8TDD1 881 aaKnown RBP22.3■■□□□ 1.16
RDX-214ENST00000533678 SHANK3Q9BYB0 1731 aa22.3■■□□□ 1.16
RDX-214ENST00000533678 EIF4A2Q14240 407 aaKnown RBP22.29■■□□□ 1.16
RDX-214ENST00000533678 EYA1Q99502 592 aa22.29■■□□□ 1.16
RDX-214ENST00000533678 KAT6BQ8WYB5 2073 aa22.29■■□□□ 1.16
RDX-214ENST00000533678 CC2D1BQ5T0F9 858 aaKnown RBP22.27■■□□□ 1.16
RDX-214ENST00000533678 PLEKHG2Q9H7P9 1386 aa22.26■■□□□ 1.15
RDX-214ENST00000533678 YY1P25490 414 aa22.25■■□□□ 1.15
RDX-214ENST00000533678 PKD1L3Q7Z443 1732 aa22.25■■□□□ 1.15
RDX-214ENST00000533678 PCDH11XQ9BZA7 1347 aa22.25■■□□□ 1.15
RDX-214ENST00000533678 PCDH11YQ9BZA8 1340 aa22.25■■□□□ 1.15
RDX-214ENST00000533678 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.24■■□□□ 1.153e-7■■■■□ 21
RDX-214ENST00000533678 PTF1AQ7RTS3 328 aa22.23■■□□□ 1.15
RDX-214ENST00000533678 ACSBG1Q96GR2 724 aa22.23■■□□□ 1.15
RDX-214ENST00000533678 SPG7Q9UQ90 795 aa22.23■■□□□ 1.15
RDX-214ENST00000533678 IGSF1Q8N6C5 1336 aa22.23■■□□□ 1.15
RDX-214ENST00000533678 KCNQ2O43526 872 aa22.22■■□□□ 1.15
RDX-214ENST00000533678 MTHFSP49914 203 aa22.22■■□□□ 1.15
RDX-214ENST00000533678 NBPF14Q5TI25 921 aa22.22■■□□□ 1.15
RDX-214ENST00000533678 BTAF1O14981 1849 aa22.22■■□□□ 1.15
RDX-214ENST00000533678 PPP1R1BQ9UD71 204 aaPredicted RBP22.21■■□□□ 1.15
RDX-214ENST00000533678 DOT1LQ8TEK3 1739 aa22.2■■□□□ 1.14
RDX-214ENST00000533678 CASZ1Q86V15 1759 aa22.2■■□□□ 1.14
RDX-214ENST00000533678 IL13P35225 146 aa22.18■■□□□ 1.14
RDX-214ENST00000533678 SPON1Q9HCB6 807 aa22.17■■□□□ 1.14
RDX-214ENST00000533678 CYP27B1O15528 508 aa22.16■■□□□ 1.14
RDX-214ENST00000533678 PRIM1P49642 420 aaKnown RBP22.16■■□□□ 1.14
RDX-214ENST00000533678 NKX1-1Q15270 411 aaPredicted RBP22.16■■□□□ 1.14
RDX-214ENST00000533678 TXNRD1Q16881 649 aa22.15■■□□□ 1.14
RDX-214ENST00000533678 DIAPH1O60610 1272 aaKnown RBP22.14■■□□□ 1.13
RDX-214ENST00000533678 AMOTQ4VCS5 1084 aa22.14■■□□□ 1.13
RDX-214ENST00000533678 IFNL2Q8IZJ0 200 aa22.14■■□□□ 1.13
RDX-214ENST00000533678 PROM2Q8N271 834 aa22.14■■□□□ 1.13
RDX-214ENST00000533678 SYTL4Q96C24 671 aaPredicted RBP22.14■■□□□ 1.13
RDX-214ENST00000533678 KDRP35968 1356 aa22.13■■□□□ 1.13
RDX-214ENST00000533678 CNGB1Q14028 1251 aaPredicted RBP22.13■■□□□ 1.13
RDX-214ENST00000533678 PLEKHO1Q53GL0 409 aaPredicted RBP22.13■■□□□ 1.13
RDX-214ENST00000533678 DCAF8L1A6NGE4 600 aa22.12■■□□□ 1.13
RDX-214ENST00000533678 SULT6B1Q6IMI4 303 aa22.12■■□□□ 1.13
RDX-214ENST00000533678 ITGB4P16144 1822 aa22.11■■□□□ 1.13
RDX-214ENST00000533678 PHKG2P15735 406 aa22.11■■□□□ 1.13
RDX-214ENST00000533678 SLC27A3Q5K4L6 730 aa22.1■■□□□ 1.13
RDX-214ENST00000533678 LY75O60449 1722 aa22.09■■□□□ 1.13
RDX-214ENST00000533678 HSP90AB1P08238 724 aaKnown RBP22.09■■□□□ 1.13
RDX-214ENST00000533678 AEBP1Q8IUX7 1158 aa22.09■■□□□ 1.13
RDX-214ENST00000533678 CFAP53Q96M91 514 aa22.09■■□□□ 1.13
RDX-214ENST00000533678 HMGB2P26583 209 aaKnown RBP22.08■■□□□ 1.13
RDX-214ENST00000533678 ANO8Q9HCE9 1232 aaPredicted RBP22.08■■□□□ 1.13
RDX-214ENST00000533678 TOGARAM1Q9Y4F4 1720 aa22.08■■□□□ 1.12
RDX-214ENST00000533678 COL3A1P02461 1466 aaPredicted RBP22.08■■□□□ 1.12
RDX-214ENST00000533678 PPP2R1AP30153 589 aa22.06■■□□□ 1.12
RDX-214ENST00000533678 STK32BQ9NY57 414 aa22.06■■□□□ 1.12
RDX-214ENST00000533678 MPRIPQ6WCQ1 1025 aa22.05■■□□□ 1.12
RDX-214ENST00000533678 C1orf141Q5JVX7 400 aa22.04■■□□□ 1.12
RDX-214ENST00000533678 ZNF530Q6P9A1 599 aaPredicted RBP22.04■■□□□ 1.12
RDX-214ENST00000533678 DCAF5Q96JK2 942 aa22.04■■□□□ 1.12
RDX-214ENST00000533678 PAPPAQ13219 1627 aa22.03■■□□□ 1.12
RDX-214ENST00000533678 SLC15A2Q16348 729 aa22.03■■□□□ 1.12
RDX-214ENST00000533678 SMARCC1Q92922 1105 aaPredicted RBP22.03■■□□□ 1.12
RDX-214ENST00000533678 ERVV-2B6SEH9 535 aa22.02■■□□□ 1.12
RDX-214ENST00000533678 TMOD3Q9NYL9 352 aa22.02■■□□□ 1.12
RDX-214ENST00000533678 NUDCQ9Y266 331 aa22.02■■□□□ 1.12
RDX-214ENST00000533678 HMOX1P09601 288 aa22.01■■□□□ 1.11
RDX-214ENST00000533678 DDX10Q13206 875 aaKnown RBP22.01■■□□□ 1.11
RDX-214ENST00000533678 PIGBQ92521 554 aa22.01■■□□□ 1.11
RDX-214ENST00000533678 LRRC4BQ9NT99 713 aa22.01■■□□□ 1.11
RDX-214ENST00000533678 U2SURPO15042 1029 aaKnown RBP22■■□□□ 1.11
RDX-214ENST00000533678 RALBP1Q15311 655 aa21.99■■□□□ 1.11
RDX-214ENST00000533678 AKAP4Q5JQC9 854 aa21.99■■□□□ 1.11
RDX-214ENST00000533678 CCNL1Q9UK58 526 aaPredicted RBP21.99■■□□□ 1.11
RDX-214ENST00000533678 PALLDQ8WX93 1383 aa21.99■■□□□ 1.11
RDX-214ENST00000533678 ZBTB7AO95365 584 aa21.98■■□□□ 1.11
RDX-214ENST00000533678 QSER1Q2KHR3 1735 aa21.97■■□□□ 1.11
RDX-214ENST00000533678 SCN11AQ9UI33 1791 aa21.97■■□□□ 1.11
RDX-214ENST00000533678 PDGFDQ9GZP0 370 aaPredicted RBP21.97■■□□□ 1.11
RDX-214ENST00000533678 AKT1S1Q96B36 256 aa21.96■■□□□ 1.11
RDX-214ENST00000533678 KDM6AO15550 1401 aaPredicted RBP21.96■■□□□ 1.11
RDX-214ENST00000533678 VIRMAQ69YN4 1812 aaKnown RBP21.94■■□□□ 1.1
RDX-214ENST00000533678 TAF1LQ8IZX4 1826 aa21.94■■□□□ 1.1
RDX-214ENST00000533678 CABP4P57796 275 aa21.94■■□□□ 1.1
RDX-214ENST00000533678 MTHFSDQ2M296 383 aaKnown RBP21.94■■□□□ 1.1
RDX-214ENST00000533678 C5P01031 1676 aa21.94■■□□□ 1.1
RDX-214ENST00000533678 ZNF316A6NFI3 1004 aaPredicted RBP21.93■■□□□ 1.1
RDX-214ENST00000533678 PTGER2P43116 358 aa21.93■■□□□ 1.1
RDX-214ENST00000533678 GAS2L2Q8NHY3 880 aa21.93■■□□□ 1.1
RDX-214ENST00000533678 ZNF827Q17R98 1081 aa21.92■■□□□ 1.1
RDX-214ENST00000533678 ATG3Q9NT62 314 aa21.92■■□□□ 1.1
RDX-214ENST00000533678 FCHSD2O94868 740 aa21.91■■□□□ 1.1
RDX-214ENST00000533678 U2AF1L5P0DN76 240 aaPredicted RBP21.91■■□□□ 1.1
RDX-214ENST00000533678 KCNQ4P56696 695 aa21.91■■□□□ 1.1
RDX-214ENST00000533678 U2AF1Q01081 240 aaKnown RBP eCLIP21.91■■□□□ 1.1
RDX-214ENST00000533678 RSPH6AQ9H0K4 717 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms