RNA–Protein interactions for RNA: ENST00000533408.1

PTP4A2-215, Transcript of protein tyrosine phosphatase type IVA, member 2, human

TSL 3

Gene PTP4A2, Length 376 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTP4A2-215	ENST00000533408	EXOC5	O00471	708 aa		27.97	■■■□□ 2.07
PTP4A2-215	ENST00000533408	PRKAR2B	P31323	418 aa		27.97	■■■□□ 2.07
PTP4A2-215	ENST00000533408	MYT1	Q01538	1121 aa		27.97	■■■□□ 2.07
PTP4A2-215	ENST00000533408	AEBP1	Q8IUX7	1158 aa		27.97	■■■□□ 2.07
PTP4A2-215	ENST00000533408	FAM9B	Q8IZU0	186 aa		27.97	■■■□□ 2.07
PTP4A2-215	ENST00000533408	RUNDC1	Q96C34	613 aa		27.95	■■■□□ 2.06
PTP4A2-215	ENST00000533408	DDB1	Q16531	1140 aa		27.94	■■■□□ 2.06
PTP4A2-215	ENST00000533408	ZCRB1	Q8TBF4	217 aa	Known RBP	27.94	■■■□□ 2.06
PTP4A2-215	ENST00000533408	GAS2L2	Q8NHY3	880 aa		27.93	■■■□□ 2.06
PTP4A2-215	ENST00000533408	POTEA	Q6S8J7	498 aa		27.92	■■■□□ 2.06
PTP4A2-215	ENST00000533408	OVOS2	A0A0G2JMS6	1433 aa		27.92	■■■□□ 2.06
PTP4A2-215	ENST00000533408	DISP2	A7MBM2	1401 aa		27.91	■■■□□ 2.06
PTP4A2-215	ENST00000533408	RGPD2	P0DJD1	1756 aa		27.91	■■■□□ 2.06
PTP4A2-215	ENST00000533408	PDE3B	Q13370	1112 aa		27.9	■■■□□ 2.06
PTP4A2-215	ENST00000533408	SEPT12	Q8IYM1	358 aa		27.9	■■■□□ 2.06
PTP4A2-215	ENST00000533408	GLI3	P10071	1580 aa		27.9	■■■□□ 2.06
PTP4A2-215	ENST00000533408	PLEKHF1	Q96S99	279 aa		27.89	■■■□□ 2.06
PTP4A2-215	ENST00000533408	PCDH11X	Q9BZA7	1347 aa		27.89	■■■□□ 2.05
PTP4A2-215	ENST00000533408	PCDH11Y	Q9BZA8	1340 aa		27.89	■■■□□ 2.05
PTP4A2-215	ENST00000533408	C1orf141	Q5JVX7	400 aa		27.88	■■■□□ 2.05
PTP4A2-215	ENST00000533408	MEGF6	O75095	1541 aa		27.87	■■■□□ 2.05
PTP4A2-215	ENST00000533408	PARP4	Q9UKK3	1724 aa	Known RBP	27.87	■■■□□ 2.05
PTP4A2-215	ENST00000533408	HSP90AB1	P08238	724 aa	Known RBP	27.87	■■■□□ 2.05
PTP4A2-215	ENST00000533408	NGEF	Q8N5V2	710 aa		27.87	■■■□□ 2.05
PTP4A2-215	ENST00000533408	IFNL2	Q8IZJ0	200 aa		27.86	■■■□□ 2.05
PTP4A2-215	ENST00000533408	ZNF530	Q6P9A1	599 aa	Predicted RBP	27.84	■■■□□ 2.05
PTP4A2-215	ENST00000533408	LMOD3	Q0VAK6	560 aa		27.83	■■■□□ 2.05
PTP4A2-215	ENST00000533408	AKAP4	Q5JQC9	854 aa		27.83	■■■□□ 2.05
PTP4A2-215	ENST00000533408	CCDC146	Q8IYE0	955 aa		27.83	■■■□□ 2.05
PTP4A2-215	ENST00000533408	PHACTR3	Q96KR7	559 aa		27.83	■■■□□ 2.05
PTP4A2-215	ENST00000533408	TNS2	Q63HR2	1409 aa		27.83	■■■□□ 2.05
PTP4A2-215	ENST00000533408	HTATSF1	O43719	755 aa	Known RBP	27.82	■■■□□ 2.04
PTP4A2-215	ENST00000533408	NFE2L2	Q16236	605 aa		27.82	■■■□□ 2.04
PTP4A2-215	ENST00000533408	MTHFSD	Q2M296	383 aa	Known RBP	27.82	■■■□□ 2.04
PTP4A2-215	ENST00000533408	NCBP3	Q53F19	620 aa	Known RBP	27.82	■■■□□ 2.04
PTP4A2-215	ENST00000533408	DDX54	Q8TDD1	881 aa	Known RBP	27.82	■■■□□ 2.04
PTP4A2-215	ENST00000533408	KRT27	Q7Z3Y8	459 aa		27.8	■■■□□ 2.04
PTP4A2-215	ENST00000533408	RTF1	Q92541	710 aa	Known RBP	27.8	■■■□□ 2.04
PTP4A2-215	ENST00000533408	THSD7A	Q9UPZ6	1657 aa		27.8	■■■□□ 2.04
PTP4A2-215	ENST00000533408	GNAT3	A8MTJ3	354 aa		27.79	■■■□□ 2.04
PTP4A2-215	ENST00000533408	WNK3	Q9BYP7	1800 aa		27.78	■■■□□ 2.04
PTP4A2-215	ENST00000533408	APAF1	O14727	1248 aa		27.78	■■■□□ 2.04
PTP4A2-215	ENST00000533408	PHKG2	P15735	406 aa		27.78	■■■□□ 2.04
PTP4A2-215	ENST00000533408	TMPO	P42166	694 aa	Known RBP	27.78	■■■□□ 2.04
PTP4A2-215	ENST00000533408	RIPK4	P57078	832 aa		27.77	■■■□□ 2.04
PTP4A2-215	ENST00000533408	NKX1-1	Q15270	411 aa	Predicted RBP	27.76	■■■□□ 2.03
PTP4A2-215	ENST00000533408	DCAF5	Q96JK2	942 aa		27.76	■■■□□ 2.03
PTP4A2-215	ENST00000533408	CYP27B1	O15528	508 aa		27.75	■■■□□ 2.03
PTP4A2-215	ENST00000533408	PKD1L3	Q7Z443	1732 aa		27.75	■■■□□ 2.03
PTP4A2-215	ENST00000533408	MAP3K5	Q99683	1374 aa		27.74	■■■□□ 2.03
PTP4A2-215	ENST00000533408	FAM196A	Q6ZSG2	479 aa		27.73	■■■□□ 2.03
PTP4A2-215	ENST00000533408	LRRC37A3	O60309	1634 aa		27.73	■■■□□ 2.03
PTP4A2-215	ENST00000533408	CALD1	Q05682	793 aa	Known RBP	27.72	■■■□□ 2.03
PTP4A2-215	ENST00000533408	MARCH10	Q8NA82	808 aa	Predicted RBP	27.72	■■■□□ 2.03
PTP4A2-215	ENST00000533408	RGS12	O14924	1447 aa		27.72	■■■□□ 2.03
PTP4A2-215	ENST00000533408	NEUROD2	Q15784	382 aa		27.71	■■■□□ 2.03
PTP4A2-215	ENST00000533408	CCDC27	Q2M243	656 aa		27.7	■■■□□ 2.02
PTP4A2-215	ENST00000533408	BCL9	O00512	1426 aa		27.69	■■■□□ 2.02
PTP4A2-215	ENST00000533408	ERVV-2	B6SEH9	535 aa		27.69	■■■□□ 2.02
PTP4A2-215	ENST00000533408	MPRIP	Q6WCQ1	1025 aa		27.67	■■■□□ 2.02
PTP4A2-215	ENST00000533408	RRP7A	Q9Y3A4	280 aa	Known RBP	27.67	■■■□□ 2.02
PTP4A2-215	ENST00000533408	RNMT	O43148	476 aa	Known RBP	27.65	■■■□□ 2.02
PTP4A2-215	ENST00000533408	TEF	Q10587	303 aa		27.65	■■■□□ 2.02
PTP4A2-215	ENST00000533408	CABP4	P57796	275 aa		27.64	■■■□□ 2.02
PTP4A2-215	ENST00000533408	HNRNPU	Q00839	825 aa	Known RBP eCLIP	27.62	■■■□□ 2.01
PTP4A2-215	ENST00000533408	IL17RE	Q8NFR9	667 aa		27.61	■■■□□ 2.01
PTP4A2-215	ENST00000533408	TRIM35	Q9UPQ4	493 aa		27.61	■■■□□ 2.01
PTP4A2-215	ENST00000533408	WDR63	Q8IWG1	891 aa		27.6	■■■□□ 2.01
PTP4A2-215	ENST00000533408	WWC1	Q8IX03	1113 aa		27.6	■■■□□ 2.01
PTP4A2-215	ENST00000533408	LGR6	Q9HBX8	967 aa		27.6	■■■□□ 2.01
PTP4A2-215	ENST00000533408	TMOD3	Q9NYL9	352 aa		27.6	■■■□□ 2.01
PTP4A2-215	ENST00000533408	CEMIP	Q8WUJ3	1361 aa		27.6	■■■□□ 2.01
PTP4A2-215	ENST00000533408	SHANK3	Q9BYB0	1731 aa		27.59	■■■□□ 2.01
PTP4A2-215	ENST00000533408	MCM10	Q7L590	875 aa		27.59	■■■□□ 2.01
PTP4A2-215	ENST00000533408	SLC52A2	Q9HAB3	445 aa		27.59	■■■□□ 2.01
PTP4A2-215	ENST00000533408	BABAM1	Q9NWV8	329 aa		27.59	■■■□□ 2.01
PTP4A2-215	ENST00000533408	TAF7	Q15545	349 aa	Predicted RBP	27.58	■■■□□ 2.01
PTP4A2-215	ENST00000533408	SYTL4	Q96C24	671 aa	Predicted RBP	27.58	■■■□□ 2.01
PTP4A2-215	ENST00000533408	PRIM1	P49642	420 aa	Known RBP	27.57	■■■□□ 2
PTP4A2-215	ENST00000533408	SALL2	Q9Y467	1007 aa	Predicted RBP	27.57	■■■□□ 2
PTP4A2-215	ENST00000533408	BCL11B	Q9C0K0	894 aa	Predicted RBP	27.56	■■■□□ 2
PTP4A2-215	ENST00000533408	IL16	Q14005	1332 aa		27.56	■■■□□ 2
PTP4A2-215	ENST00000533408	KDM6A	O15550	1401 aa	Predicted RBP	27.56	■■■□□ 2
PTP4A2-215	ENST00000533408	BRWD3	Q6RI45	1802 aa		27.55	■■■□□ 2
PTP4A2-215	ENST00000533408	DCTN1	Q14203	1278 aa		27.55	■■■□□ 2
PTP4A2-215	ENST00000533408	FAM182B	Q5T319	152 aa		27.55	■■■□□ 2
PTP4A2-215	ENST00000533408	NFATC2IP	Q8NCF5	419 aa		27.55	■■■□□ 2
PTP4A2-215	ENST00000533408	GNAI1	P63096	354 aa		27.54	■■■□□ 2
PTP4A2-215	ENST00000533408	ACSBG1	Q96GR2	724 aa		27.54	■■■□□ 2
PTP4A2-215	ENST00000533408	HMGB2	P26583	209 aa	Known RBP	27.53	■■■□□ 2
PTP4A2-215	ENST00000533408	CCDC125	Q86Z20	511 aa		27.53	■■■□□ 2
PTP4A2-215	ENST00000533408	SMARCC1	Q92922	1105 aa	Predicted RBP	27.52	■■■□□ 2
PTP4A2-215	ENST00000533408	BTBD11	A6QL63	1104 aa		27.51	■■□□□ 1.99
PTP4A2-215	ENST00000533408	SF3B2	Q13435	895 aa	Known RBP	27.51	■■□□□ 1.99
PTP4A2-215	ENST00000533408	CFAP44	Q96MT7	982 aa		27.51	■■□□□ 1.99
PTP4A2-215	ENST00000533408	IFT57	Q9NWB7	429 aa		27.51	■■□□□ 1.99
PTP4A2-215	ENST00000533408	ADAMTS7	Q9UKP4	1686 aa		27.51	■■□□□ 1.99
PTP4A2-215	ENST00000533408	GOLGA2	Q08379	1002 aa		27.5	■■□□□ 1.99
PTP4A2-215	ENST00000533408	SCN11A	Q9UI33	1791 aa		27.5	■■□□□ 1.99
PTP4A2-215	ENST00000533408	DLG5	Q8TDM6	1919 aa		27.49	■■□□□ 1.99

Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms