RNA–Protein interactions for RNA: ENST00000533390.5

AP004608.1-202, humanhuman

TSL 1 (best) BASIC

Gene AP004608.1, Length 1,863 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004608.1-202ENST00000533390 CHL1O00533 1208 aa27.98■■■□□ 2.07
AP004608.1-202ENST00000533390 CLUAP1Q96AJ1 413 aa27.98■■■□□ 2.07
AP004608.1-202ENST00000533390 CRB1P82279 1406 aa27.97■■■□□ 2.07
AP004608.1-202ENST00000533390 RGPD5Q99666 1765 aa27.97■■■□□ 2.07
AP004608.1-202ENST00000533390 SLAIN2Q9P270 581 aa27.97■■■□□ 2.07
AP004608.1-202ENST00000533390 TNNQ9UQP3 1299 aa27.97■■■□□ 2.07
AP004608.1-202ENST00000533390 SPATA31A3Q5VYP0 1347 aa27.97■■■□□ 2.07
AP004608.1-202ENST00000533390 RLBP1P12271 317 aa27.96■■■□□ 2.07
AP004608.1-202ENST00000533390 BRPF1P55201 1214 aaPredicted RBP27.96■■■□□ 2.07
AP004608.1-202ENST00000533390 ATF7IPQ6VMQ6 1270 aa27.96■■■□□ 2.07
AP004608.1-202ENST00000533390 TSPYL6Q8N831 410 aa27.96■■■□□ 2.07
AP004608.1-202ENST00000533390 ANKRD24Q8TF21 1146 aa27.96■■■□□ 2.07
AP004608.1-202ENST00000533390 NOB1Q9ULX3 412 aaKnown RBP27.96■■■□□ 2.07
AP004608.1-202ENST00000533390 HAP1P54257 671 aaPredicted RBP27.95■■■□□ 2.07
AP004608.1-202ENST00000533390 CENPQQ7L2Z9 268 aaPredicted RBP27.95■■■□□ 2.07
AP004608.1-202ENST00000533390 ZC3H6P61129 1189 aaKnown RBP27.95■■■□□ 2.06
AP004608.1-202ENST00000533390 MAP3K5Q99683 1374 aa27.95■■■□□ 2.06
AP004608.1-202ENST00000533390 ELL2O00472 640 aaPredicted RBP27.94■■■□□ 2.06
AP004608.1-202ENST00000533390 C8orf58Q8NAV2 365 aa27.94■■■□□ 2.06
AP004608.1-202ENST00000533390 TRIM27P14373 513 aa27.93■■■□□ 2.06
AP004608.1-202ENST00000533390 LRRC59Q96AG4 307 aaKnown RBP27.93■■■□□ 2.06
AP004608.1-202ENST00000533390 LRRC37A3O60309 1634 aa27.93■■■□□ 2.06
AP004608.1-202ENST00000533390 MVPQ14764 893 aaKnown RBP27.93■■■□□ 2.06
AP004608.1-202ENST00000533390 KDM2BQ8NHM5 1336 aa27.93■■■□□ 2.06
AP004608.1-202ENST00000533390 CAMTA1Q9Y6Y1 1673 aa27.93■■■□□ 2.06
AP004608.1-202ENST00000533390 CRYBG1Q9Y4K1 1723 aa27.92■■■□□ 2.06
AP004608.1-202ENST00000533390 KIAA0232Q92628 1395 aa27.91■■■□□ 2.06
AP004608.1-202ENST00000533390 AXIN2Q9Y2T1 843 aa27.91■■■□□ 2.06
AP004608.1-202ENST00000533390 NCAPD2Q15021 1401 aa27.9■■■□□ 2.06
AP004608.1-202ENST00000533390 MRPL50Q8N5N7 158 aaKnown RBP27.89■■■□□ 2.06
AP004608.1-202ENST00000533390 TSPYL4Q9UJ04 414 aa27.89■■■□□ 2.05
AP004608.1-202ENST00000533390 ABCC6O95255 1503 aa27.87■■■□□ 2.05
AP004608.1-202ENST00000533390 CABLES1Q8TDN4 633 aa27.87■■■□□ 2.05
AP004608.1-202ENST00000533390 ERBB3P21860 1342 aa27.87■■■□□ 2.05
AP004608.1-202ENST00000533390 PLEKHO1Q53GL0 409 aaPredicted RBP27.87■■■□□ 2.05
AP004608.1-202ENST00000533390 DDX19BQ9UMR2 479 aa27.87■■■□□ 2.05
AP004608.1-202ENST00000533390 COL18A1P39060 1754 aa27.87■■■□□ 2.05
AP004608.1-202ENST00000533390 SOS2Q07890 1332 aaPredicted RBP27.86■■■□□ 2.05
AP004608.1-202ENST00000533390 ARHGAP45Q92619 1136 aa27.86■■■□□ 2.05
AP004608.1-202ENST00000533390 AMOTQ4VCS5 1084 aa27.85■■■□□ 2.05
AP004608.1-202ENST00000533390 ITPRIPQ8IWB1 547 aa27.85■■■□□ 2.05
AP004608.1-202ENST00000533390 LMO7Q8WWI1 1683 aa27.84■■■□□ 2.05
AP004608.1-202ENST00000533390 TCERG1O14776 1098 aaKnown RBP27.84■■■□□ 2.05
AP004608.1-202ENST00000533390 FAM208AQ9UK61 1670 aaKnown RBP27.84■■■□□ 2.05
AP004608.1-202ENST00000533390 IL17REQ8NFR9 667 aa27.83■■■□□ 2.05
AP004608.1-202ENST00000533390 MIS18AQ9NYP9 233 aa27.83■■■□□ 2.05
AP004608.1-202ENST00000533390 RBM19Q9Y4C8 960 aaKnown RBP27.83■■■□□ 2.05
AP004608.1-202ENST00000533390 BABAM1Q9NWV8 329 aa27.82■■■□□ 2.04
AP004608.1-202ENST00000533390 CPDO75976 1380 aa27.81■■■□□ 2.04
AP004608.1-202ENST00000533390 NHSL1Q5SYE7 1610 aa27.81■■■□□ 2.04
AP004608.1-202ENST00000533390 KRT24Q2M2I5 525 aa27.81■■■□□ 2.04
AP004608.1-202ENST00000533390 TMEM57Q8N5G2 664 aa27.81■■■□□ 2.04
AP004608.1-202ENST00000533390 TAF7Q15545 349 aaPredicted RBP27.81■■■□□ 2.04
AP004608.1-202ENST00000533390 AKAP4Q5JQC9 854 aa27.81■■■□□ 2.04
AP004608.1-202ENST00000533390 ZNF530Q6P9A1 599 aaPredicted RBP27.81■■■□□ 2.04
AP004608.1-202ENST00000533390 API5Q9BZZ5 524 aaKnown RBP27.78■■■□□ 2.04
AP004608.1-202ENST00000533390 CSB-PGBD3P0DP91 1061 aa27.78■■■□□ 2.04
AP004608.1-202ENST00000533390 C1orf141Q5JVX7 400 aa27.78■■■□□ 2.04
AP004608.1-202ENST00000533390 NLRP2Q9NX02 1062 aa27.78■■■□□ 2.04
AP004608.1-202ENST00000533390 VIRMAQ69YN4 1812 aaKnown RBP27.78■■■□□ 2.04
AP004608.1-202ENST00000533390 CEMIPQ8WUJ3 1361 aa27.78■■■□□ 2.04
AP004608.1-202ENST00000533390 CHRNA2Q15822 529 aa27.77■■■□□ 2.04
AP004608.1-202ENST00000533390 IGHDP01880 384 aa27.76■■■□□ 2.04
AP004608.1-202ENST00000533390 CHMP4BQ9H444 224 aaKnown RBP27.76■■■□□ 2.03
AP004608.1-202ENST00000533390 RAPGEF4Q8WZA2 1011 aa27.75■■■□□ 2.03
AP004608.1-202ENST00000533390 PCDHB15Q9Y5E8 787 aa27.75■■■□□ 2.03
AP004608.1-202ENST00000533390 RWDD1Q9H446 243 aaPredicted RBP27.74■■■□□ 2.03
AP004608.1-202ENST00000533390 ABCA3Q99758 1704 aa27.73■■■□□ 2.03
AP004608.1-202ENST00000533390 ABCC4O15439 1325 aa27.72■■■□□ 2.03
AP004608.1-202ENST00000533390 SOS1Q07889 1333 aaPredicted RBP27.72■■■□□ 2.03
AP004608.1-202ENST00000533390 TEFQ10587 303 aa27.72■■■□□ 2.03
AP004608.1-202ENST00000533390 LGR6Q9HBX8 967 aa27.72■■■□□ 2.03
AP004608.1-202ENST00000533390 TATP17735 454 aaPredicted RBP27.71■■■□□ 2.03
AP004608.1-202ENST00000533390 PRDM11Q9NQV5 511 aa27.71■■■□□ 2.03
AP004608.1-202ENST00000533390 OVOS2A0A0G2JMS6 1433 aa27.71■■■□□ 2.03
AP004608.1-202ENST00000533390 KDM3BQ7LBC6 1761 aa27.7■■■□□ 2.02
AP004608.1-202ENST00000533390 PTPRCP08575 1304 aa27.69■■■□□ 2.02
AP004608.1-202ENST00000533390 RNMTO43148 476 aaKnown RBP27.69■■■□□ 2.02
AP004608.1-202ENST00000533390 MPRIPQ6WCQ1 1025 aa27.69■■■□□ 2.02
AP004608.1-202ENST00000533390 ZBTB40Q9NUA8 1239 aa27.69■■■□□ 2.02
AP004608.1-202ENST00000533390 CACNA1FO60840 1977 aa27.68■■■□□ 2.02
AP004608.1-202ENST00000533390 PLEKHG2Q9H7P9 1386 aa27.68■■■□□ 2.02
AP004608.1-202ENST00000533390 SLC4A2P04920 1241 aa27.68■■■□□ 2.02
AP004608.1-202ENST00000533390 STK31Q9BXU1 1019 aa27.68■■■□□ 2.02
AP004608.1-202ENST00000533390 SKAP1Q86WV1 359 aa27.67■■■□□ 2.02
AP004608.1-202ENST00000533390 CCDC30Q5VVM6 783 aa27.66■■■□□ 2.02
AP004608.1-202ENST00000533390 SPG7Q9UQ90 795 aa27.66■■■□□ 2.02
AP004608.1-202ENST00000533390 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.65■■■□□ 2.02
AP004608.1-202ENST00000533390 ROBO1Q9Y6N7 1651 aa27.64■■■□□ 2.02
AP004608.1-202ENST00000533390 ZBTB7BO15156 539 aaPredicted RBP27.64■■■□□ 2.01
AP004608.1-202ENST00000533390 MEGF6O75095 1541 aa27.63■■■□□ 2.01
AP004608.1-202ENST00000533390 ADAMTS7Q9UKP4 1686 aa27.63■■■□□ 2.01
AP004608.1-202ENST00000533390 BTBD11A6QL63 1104 aa27.63■■■□□ 2.01
AP004608.1-202ENST00000533390 LTBP4Q8N2S1 1624 aa27.63■■■□□ 2.01
AP004608.1-202ENST00000533390 HDAC1Q13547 482 aaPredicted RBP27.62■■■□□ 2.01
AP004608.1-202ENST00000533390 RGS3P49796 1198 aa27.61■■■□□ 2.01
AP004608.1-202ENST00000533390 WDR17Q8IZU2 1322 aa27.61■■■□□ 2.01
AP004608.1-202ENST00000533390 PKD1L3Q7Z443 1732 aa27.61■■■□□ 2.01
AP004608.1-202ENST00000533390 CHMP4AQ9BY43 222 aa27.61■■■□□ 2.01
AP004608.1-202ENST00000533390 SIPA1L3O60292 1781 aaPredicted RBP27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms