RNA–Protein interactions for RNA: ENST00000533258.5

MMP8-206, Transcript of matrix metallopeptidase 8, humanhuman

TSL 3

Gene MMP8, Length 707 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8-206ENST00000533258 CCDC61Q9Y6R9 512 aa12.57□□□□□ -0.4
MMP8-206ENST00000533258 PPIP5K1Q6PFW1 1433 aa12.56□□□□□ -0.4
MMP8-206ENST00000533258 CCDC7Q96M83 1385 aa12.56□□□□□ -0.4
MMP8-206ENST00000533258 LY75O60449 1722 aa12.55□□□□□ -0.4
MMP8-206ENST00000533258 ARHGEF25Q86VW2 580 aa12.55□□□□□ -0.4
MMP8-206ENST00000533258 CDK19Q9BWU1 502 aa12.55□□□□□ -0.4
MMP8-206ENST00000533258 CPSF1Q10570 1443 aaKnown RBP12.54□□□□□ -0.4
MMP8-206ENST00000533258 NLRP6P59044 892 aa12.53□□□□□ -0.4
MMP8-206ENST00000533258 C16orf71Q8IYS4 520 aaPredicted RBP12.53□□□□□ -0.4
MMP8-206ENST00000533258 PIK3C2AO00443 1686 aa12.52□□□□□ -0.4
MMP8-206ENST00000533258 CSB-PGBD3P0DP91 1061 aa12.52□□□□□ -0.41
MMP8-206ENST00000533258 C10orf71Q711Q0 1435 aa12.51□□□□□ -0.41
MMP8-206ENST00000533258 QRICH2Q9H0J4 1663 aa12.49□□□□□ -0.41
MMP8-206ENST00000533258 PRDM10Q9NQV6 1147 aa12.49□□□□□ -0.41
MMP8-206ENST00000533258 NSD2O96028 1365 aa12.48□□□□□ -0.41
MMP8-206ENST00000533258 IL2RBP14784 551 aa12.48□□□□□ -0.41
MMP8-206ENST00000533258 SMC1BQ8NDV3 1235 aa12.48□□□□□ -0.41
MMP8-206ENST00000533258 CCNL1Q9UK58 526 aaPredicted RBP12.48□□□□□ -0.41
MMP8-206ENST00000533258 KIAA1210Q9ULL0 1709 aa12.48□□□□□ -0.41
MMP8-206ENST00000533258 ZNF219Q9P2Y4 722 aaPredicted RBP12.47□□□□□ -0.41
MMP8-206ENST00000533258 USP54Q70EL1 1684 aa12.47□□□□□ -0.41
MMP8-206ENST00000533258 KCPQ6ZWJ8 1503 aa12.47□□□□□ -0.41
MMP8-206ENST00000533258 PXDNLA1KZ92 1463 aa12.46□□□□□ -0.41
MMP8-206ENST00000533258 KIAA1551Q9HCM1 1747 aa12.46□□□□□ -0.41
MMP8-206ENST00000533258 FOXN1O15353 648 aa12.46□□□□□ -0.41
MMP8-206ENST00000533258 PRIM1P49642 420 aaKnown RBP12.46□□□□□ -0.41
MMP8-206ENST00000533258 RGS19P49795 217 aa12.46□□□□□ -0.41
MMP8-206ENST00000533258 RRAGCQ9HB90 399 aa12.46□□□□□ -0.41
MMP8-206ENST00000533258 SPINK5Q9NQ38 1064 aaPredicted RBP12.46□□□□□ -0.41
MMP8-206ENST00000533258 MLLT1Q03111 559 aaPredicted RBP12.45□□□□□ -0.42
MMP8-206ENST00000533258 FLAD1Q8NFF5 587 aa12.45□□□□□ -0.42
MMP8-206ENST00000533258 ANKRD36BQ8N2N9 1353 aa12.44□□□□□ -0.42
MMP8-206ENST00000533258 PLEKHG2Q9H7P9 1386 aa12.44□□□□□ -0.42
MMP8-206ENST00000533258 ERBB3P21860 1342 aa12.44□□□□□ -0.42
MMP8-206ENST00000533258 KDM2BQ8NHM5 1336 aa12.44□□□□□ -0.42
MMP8-206ENST00000533258 C9orf131Q5VYM1 1079 aa12.44□□□□□ -0.42
MMP8-206ENST00000533258 ARHGAP27Q6ZUM4 889 aa12.44□□□□□ -0.42
MMP8-206ENST00000533258 KCNH5Q8NCM2 988 aa12.44□□□□□ -0.42
MMP8-206ENST00000533258 ABHD8Q96I13 439 aa12.44□□□□□ -0.42
MMP8-206ENST00000533258 MPHOSPH9Q99550 1183 aa12.44□□□□□ -0.42
MMP8-206ENST00000533258 TNRC6CQ9HCJ0 1690 aaKnown RBP12.44□□□□□ -0.42
MMP8-206ENST00000533258 NFAT5O94916 1531 aa12.43□□□□□ -0.42
MMP8-206ENST00000533258 PKD1L3Q7Z443 1732 aa12.43□□□□□ -0.42
MMP8-206ENST00000533258 C5P01031 1676 aa12.43□□□□□ -0.42
MMP8-206ENST00000533258 AMIGO3Q86WK7 504 aa12.43□□□□□ -0.42
MMP8-206ENST00000533258 SYTL4Q96C24 671 aaPredicted RBP12.43□□□□□ -0.42
MMP8-206ENST00000533258 NLRP2Q9NX02 1062 aa12.43□□□□□ -0.42
MMP8-206ENST00000533258 KIF13BQ9NQT8 1826 aa12.43□□□□□ -0.42
MMP8-206ENST00000533258 TNRC18O15417 2968 aaPredicted RBP12.42□□□□□ -0.42
MMP8-206ENST00000533258 TAF1LQ8IZX4 1826 aa12.42□□□□□ -0.42
MMP8-206ENST00000533258 CACNB1Q02641 598 aaPredicted RBP12.42□□□□□ -0.42
MMP8-206ENST00000533258 DDX54Q8TDD1 881 aaKnown RBP12.42□□□□□ -0.42
MMP8-206ENST00000533258 BCS1LQ9Y276 419 aa12.42□□□□□ -0.42
MMP8-206ENST00000533258 N4BP2Q86UW6 1770 aaPredicted RBP12.42□□□□□ -0.42
MMP8-206ENST00000533258 DOT1LQ8TEK3 1739 aa12.42□□□□□ -0.42
MMP8-206ENST00000533258 SMIM5Q71RC9 77 aa12.41□□□□□ -0.42
MMP8-206ENST00000533258 TOGARAM1Q9Y4F4 1720 aa12.41□□□□□ -0.42
MMP8-206ENST00000533258 SOX12O15370 315 aa12.4□□□□□ -0.42
MMP8-206ENST00000533258 BRCA1P38398 1863 aaKnown RBP12.4□□□□□ -0.42
MMP8-206ENST00000533258 A0A0G2JLW4 131 aa12.39□□□□□ -0.43
MMP8-206ENST00000533258 TGFB2P61812 414 aa12.39□□□□□ -0.43
MMP8-206ENST00000533258 CABP1Q9NZU7 370 aa12.39□□□□□ -0.43
MMP8-206ENST00000533258 UBR3Q6ZT12 1888 aa12.38□□□□□ -0.43
MMP8-206ENST00000533258 CTCFP49711 727 aaPredicted RBP12.38□□□□□ -0.43
MMP8-206ENST00000533258 PDE4DIPQ5VU43 2346 aa12.38□□□□□ -0.43
MMP8-206ENST00000533258 SBF1O95248 1867 aa12.38□□□□□ -0.43
MMP8-206ENST00000533258 ARFGEF1Q9Y6D6 1849 aa12.37□□□□□ -0.43
MMP8-206ENST00000533258 CABP2Q9NPB3 220 aa12.37□□□□□ -0.43
MMP8-206ENST00000533258 USP47Q96K76 1375 aa12.37□□□□□ -0.43
MMP8-206ENST00000533258 SRPK2P78362 688 aaKnown RBP12.36□□□□□ -0.43
MMP8-206ENST00000533258 MKRN1Q9UHC7 482 aaKnown RBP12.36□□□□□ -0.43
MMP8-206ENST00000533258 C4BP0C0L5 1744 aa12.36□□□□□ -0.43
MMP8-206ENST00000533258 TTC21BQ7Z4L5 1316 aa12.36□□□□□ -0.43
MMP8-206ENST00000533258 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.35□□□□□ -0.43
MMP8-206ENST00000533258 FCHSD2O94868 740 aa12.35□□□□□ -0.43
MMP8-206ENST00000533258 LBX1P52954 281 aa12.35□□□□□ -0.43
MMP8-206ENST00000533258 CREBZFQ9NS37 354 aa12.35□□□□□ -0.43
MMP8-206ENST00000533258 RNF181Q9P0P0 153 aa12.35□□□□□ -0.43
MMP8-206ENST00000533258 KDM2AQ9Y2K7 1162 aa12.35□□□□□ -0.43
MMP8-206ENST00000533258 VEGFAP15692 232 aaPredicted RBP12.34□□□□□ -0.43
MMP8-206ENST00000533258 DPEP1P16444 411 aa12.34□□□□□ -0.43
MMP8-206ENST00000533258 KCNA3P22001 575 aa12.34□□□□□ -0.43
MMP8-206ENST00000533258 HMGB2P26583 209 aaKnown RBP12.34□□□□□ -0.43
MMP8-206ENST00000533258 ANKRD24Q8TF21 1146 aa12.34□□□□□ -0.43
MMP8-206ENST00000533258 PHF14O94880 888 aa12.33□□□□□ -0.44
MMP8-206ENST00000533258 MMP10P09238 476 aa12.33□□□□□ -0.44
MMP8-206ENST00000533258 DCAF11Q8TEB1 546 aa12.33□□□□□ -0.44
MMP8-206ENST00000533258 WBP1LQ9NX94 342 aa12.33□□□□□ -0.44
MMP8-206ENST00000533258 CCDC85CA6NKD9 419 aa12.32□□□□□ -0.44
MMP8-206ENST00000533258 SSFA2P28290 1259 aa12.32□□□□□ -0.44
MMP8-206ENST00000533258 DCAF5Q96JK2 942 aa12.32□□□□□ -0.44
MMP8-206ENST00000533258 AK7Q96M32 723 aa12.32□□□□□ -0.44
MMP8-206ENST00000533258 CNTNAP1P78357 1384 aa12.31□□□□□ -0.44
MMP8-206ENST00000533258 LTN1O94822 1766 aa12.31□□□□□ -0.44
MMP8-206ENST00000533258 AIDAQ96BJ3 306 aa12.31□□□□□ -0.44
MMP8-206ENST00000533258 STAC3Q96MF2 364 aa12.31□□□□□ -0.44
MMP8-206ENST00000533258 TTC21AQ8NDW8 1320 aa12.31□□□□□ -0.44
MMP8-206ENST00000533258 VIRMAQ69YN4 1812 aaKnown RBP12.3□□□□□ -0.44
MMP8-206ENST00000533258 NSD3Q9BZ95 1437 aa12.3□□□□□ -0.44
MMP8-206ENST00000533258 GLTPD2A6NH11 291 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms