RNA–Protein interactions for RNA: ENST00000533249.5

PKP3-210, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 1,111 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-210ENST00000533249 USHBP1Q8N6Y0 703 aa31.9■■■□□ 2.7
PKP3-210ENST00000533249 NBPF4Q96M43 638 aa31.9■■■□□ 2.7
PKP3-210ENST00000533249 SGIP1Q9BQI5 828 aa31.9■■■□□ 2.7
PKP3-210ENST00000533249 CDCA8Q53HL2 280 aa31.89■■■□□ 2.7
PKP3-210ENST00000533249 KIF20BQ96Q89 1820 aa31.89■■■□□ 2.69
PKP3-210ENST00000533249 SLC27A3Q5K4L6 730 aa31.88■■■□□ 2.69
PKP3-210ENST00000533249 SYT17Q9BSW7 474 aa31.88■■■□□ 2.69
PKP3-210ENST00000533249 SMG6Q86US8 1419 aaKnown RBP31.87■■■□□ 2.69
PKP3-210ENST00000533249 KCNQ4P56696 695 aa31.86■■■□□ 2.69
PKP3-210ENST00000533249 AKT1S1Q96B36 256 aa31.86■■■□□ 2.69
PKP3-210ENST00000533249 RAPGEF4Q8WZA2 1011 aa31.84■■■□□ 2.69
PKP3-210ENST00000533249 ARXQ96QS3 562 aa31.84■■■□□ 2.69
PKP3-210ENST00000533249 NSD2O96028 1365 aa31.83■■■□□ 2.69
PKP3-210ENST00000533249 HSP90AB2PQ58FF8 381 aa31.83■■■□□ 2.69
PKP3-210ENST00000533249 INSRP06213 1382 aa31.81■■■□□ 2.68
PKP3-210ENST00000533249 TATP17735 454 aaPredicted RBP31.8■■■□□ 2.68
PKP3-210ENST00000533249 CARD14Q9BXL6 1004 aa31.8■■■□□ 2.68
PKP3-210ENST00000533249 LY75O60449 1722 aa31.8■■■□□ 2.68
PKP3-210ENST00000533249 FLT4P35916 1363 aa31.8■■■□□ 2.68
PKP3-210ENST00000533249 CGNL1Q0VF96 1302 aa31.79■■■□□ 2.68
PKP3-210ENST00000533249 TFCP2L1Q9NZI6 479 aa31.79■■■□□ 2.68
PKP3-210ENST00000533249 PNPLA7Q6ZV29 1317 aa31.78■■■□□ 2.68
PKP3-210ENST00000533249 QSER1Q2KHR3 1735 aa31.78■■■□□ 2.68
PKP3-210ENST00000533249 NSD3Q9BZ95 1437 aa31.78■■■□□ 2.68
PKP3-210ENST00000533249 TUBGCP6Q96RT7 1819 aa31.77■■■□□ 2.68
PKP3-210ENST00000533249 SLC16A10Q8TF71 515 aa31.76■■■□□ 2.67
PKP3-210ENST00000533249 CCNL1Q9UK58 526 aaPredicted RBP31.76■■■□□ 2.67
PKP3-210ENST00000533249 EMILIN1Q9Y6C2 1016 aa31.75■■■□□ 2.67
PKP3-210ENST00000533249 KIF24Q5T7B8 1368 aa31.75■■■□□ 2.67
PKP3-210ENST00000533249 KLHL34Q8N239 644 aa31.72■■■□□ 2.67
PKP3-210ENST00000533249 TIMELESSQ9UNS1 1208 aa31.72■■■□□ 2.67
PKP3-210ENST00000533249 PCDH11XQ9BZA7 1347 aa31.72■■■□□ 2.67
PKP3-210ENST00000533249 PCDH11YQ9BZA8 1340 aa31.72■■■□□ 2.67
PKP3-210ENST00000533249 MAP3K5Q99683 1374 aa31.71■■■□□ 2.67
PKP3-210ENST00000533249 PPM1GO15355 546 aaPredicted RBP31.71■■■□□ 2.67
PKP3-210ENST00000533249 POLD1P28340 1107 aa31.71■■■□□ 2.67
PKP3-210ENST00000533249 PCGF6Q9BYE7 350 aa31.7■■■□□ 2.67
PKP3-210ENST00000533249 POLR3GLQ9BT43 218 aa31.67■■■□□ 2.66
PKP3-210ENST00000533249 CYP27B1O15528 508 aa31.66■■■□□ 2.66
PKP3-210ENST00000533249 MSH5O43196 834 aa31.66■■■□□ 2.66
PKP3-210ENST00000533249 COL24A1Q17RW2 1714 aa31.66■■■□□ 2.66
PKP3-210ENST00000533249 MPRIPQ6WCQ1 1025 aa31.64■■■□□ 2.66
PKP3-210ENST00000533249 GPR162Q16538 588 aa31.62■■■□□ 2.65
PKP3-210ENST00000533249 COL23A1Q86Y22 540 aaPredicted RBP31.62■■■□□ 2.65
PKP3-210ENST00000533249 PALLDQ8WX93 1383 aa31.62■■■□□ 2.65
PKP3-210ENST00000533249 CLSPNQ9HAW4 1339 aa31.62■■■□□ 2.65
PKP3-210ENST00000533249 ANKRD26Q9UPS8 1709 aa31.62■■■□□ 2.65
PKP3-210ENST00000533249 CHD4Q14839 1912 aa31.61■■■□□ 2.65
PKP3-210ENST00000533249 PKD1L3Q7Z443 1732 aa31.61■■■□□ 2.65
PKP3-210ENST00000533249 C5P01031 1676 aa31.61■■■□□ 2.65
PKP3-210ENST00000533249 MAP2P11137 1827 aaKnown RBP31.61■■■□□ 2.65
PKP3-210ENST00000533249 TOGARAM1Q9Y4F4 1720 aa31.61■■■□□ 2.65
PKP3-210ENST00000533249 ZNF784Q8NCA9 323 aaPredicted RBP31.6■■■□□ 2.65
PKP3-210ENST00000533249 WASHC2AQ641Q2 1341 aa31.59■■■□□ 2.65
PKP3-210ENST00000533249 UTRNP46939 3433 aa31.59■■■□□ 2.65
PKP3-210ENST00000533249 ITGB4P16144 1822 aa31.59■■■□□ 2.65
PKP3-210ENST00000533249 NCAPD2Q15021 1401 aa31.58■■■□□ 2.65
PKP3-210ENST00000533249 PELP1Q8IZL8 1130 aaKnown RBP31.58■■■□□ 2.65
PKP3-210ENST00000533249 MSL1Q68DK7 614 aa31.56■■■□□ 2.64
PKP3-210ENST00000533249 EYA1Q99502 592 aa31.56■■■□□ 2.64
PKP3-210ENST00000533249 POLKQ9UBT6 870 aa31.56■■■□□ 2.64
PKP3-210ENST00000533249 SPG7Q9UQ90 795 aa31.56■■■□□ 2.64
PKP3-210ENST00000533249 TAF1LQ8IZX4 1826 aa31.55■■■□□ 2.64
PKP3-210ENST00000533249 TNNT2P45379 298 aaPredicted RBP31.55■■■□□ 2.64
PKP3-210ENST00000533249 NLGN2Q8NFZ4 835 aa31.55■■■□□ 2.64
PKP3-210ENST00000533249 SMARCC1Q92922 1105 aaPredicted RBP31.53■■■□□ 2.64
PKP3-210ENST00000533249 PIGBQ92521 554 aa31.52■■■□□ 2.64
PKP3-210ENST00000533249 HMGB2P26583 209 aaKnown RBP31.51■■■□□ 2.63
PKP3-210ENST00000533249 NKX1-1Q15270 411 aaPredicted RBP31.51■■■□□ 2.63
PKP3-210ENST00000533249 EIF4G2P78344 907 aaKnown RBP eCLIP31.49■■■□□ 2.63
PKP3-210ENST00000533249 FLAD1Q8NFF5 587 aa31.49■■■□□ 2.63
PKP3-210ENST00000533249 C4BP0C0L5 1744 aa31.49■■■□□ 2.63
PKP3-210ENST00000533249 HSPA5P11021 654 aaKnown RBP31.48■■■□□ 2.63
PKP3-210ENST00000533249 AK7Q96M32 723 aa31.48■■■□□ 2.63
PKP3-210ENST00000533249 EIF4A2Q14240 407 aaKnown RBP31.47■■■□□ 2.63
PKP3-210ENST00000533249 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.47■■■□□ 2.63
PKP3-210ENST00000533249 TMOD3Q9NYL9 352 aa31.45■■■□□ 2.63
PKP3-210ENST00000533249 PHKG2P15735 406 aa31.44■■■□□ 2.62
PKP3-210ENST00000533249 IFNL2Q8IZJ0 200 aa31.44■■■□□ 2.62
PKP3-210ENST00000533249 PANK3Q9H999 370 aa31.44■■■□□ 2.62
PKP3-210ENST00000533249 PHF14O94880 888 aa31.43■■■□□ 2.62
PKP3-210ENST00000533249 SMIM5Q71RC9 77 aa31.43■■■□□ 2.62
PKP3-210ENST00000533249 AMIGO3Q86WK7 504 aa31.43■■■□□ 2.62
PKP3-210ENST00000533249 LOC102724428A0A0B4J2F2 783 aa31.41■■■□□ 2.62
PKP3-210ENST00000533249 SIK1P57059 783 aa31.41■■■□□ 2.62
PKP3-210ENST00000533249 ASAP1Q9ULH1 1129 aa31.41■■■□□ 2.62
PKP3-210ENST00000533249 UBR3Q6ZT12 1888 aa31.4■■■□□ 2.62
PKP3-210ENST00000533249 YBX3P16989 372 aaKnown RBP eCLIP31.4■■■□□ 2.62
PKP3-210ENST00000533249 LINC00116Q8NCU8 138 aa31.39■■■□□ 2.62
PKP3-210ENST00000533249 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.38■■■□□ 2.61
PKP3-210ENST00000533249 CCER1Q8TC90 406 aaPredicted RBP31.38■■■□□ 2.61
PKP3-210ENST00000533249 IGSF1Q8N6C5 1336 aa31.36■■■□□ 2.61
PKP3-210ENST00000533249 CD2APQ9Y5K6 639 aa31.36■■■□□ 2.61
PKP3-210ENST00000533249 GOLGB1Q14789 3259 aaKnown RBP31.36■■■□□ 2.61
PKP3-210ENST00000533249 GRIN3BO60391 1043 aa31.35■■■□□ 2.61
PKP3-210ENST00000533249 ATP6V1AP38606 617 aa31.35■■■□□ 2.61
PKP3-210ENST00000533249 ITPK1Q13572 414 aa31.35■■■□□ 2.61
PKP3-210ENST00000533249 SSFA2P28290 1259 aa31.34■■■□□ 2.61
PKP3-210ENST00000533249 ATG3Q9NT62 314 aa31.34■■■□□ 2.61
PKP3-210ENST00000533249 GNPATO15228 680 aa31.32■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms