RNA–Protein interactions for RNA: ENST00000533145.5

HIF3A-215, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-215ENST00000533145 TATP17735 454 aaPredicted RBP18.56■□□□□ 0.56
HIF3A-215ENST00000533145 VPS72Q15906 364 aa18.56■□□□□ 0.56
HIF3A-215ENST00000533145 MTHFSDQ2M296 383 aaKnown RBP18.56■□□□□ 0.56
HIF3A-215ENST00000533145 PLEKHO1Q53GL0 409 aaPredicted RBP18.56■□□□□ 0.56
HIF3A-215ENST00000533145 GAS2L2Q8NHY3 880 aa18.56■□□□□ 0.56
HIF3A-215ENST00000533145 PKD1L3Q7Z443 1732 aa18.56■□□□□ 0.56
HIF3A-215ENST00000533145 WNK3Q9BYP7 1800 aa18.56■□□□□ 0.56
HIF3A-215ENST00000533145 SPATA31A5Q5VU36 1347 aa18.55■□□□□ 0.56
HIF3A-215ENST00000533145 SPATA31A7Q8IWB4 1347 aa18.55■□□□□ 0.56
HIF3A-215ENST00000533145 RIPK4P57078 832 aa18.55■□□□□ 0.56
HIF3A-215ENST00000533145 USP21Q9UK80 565 aa18.55■□□□□ 0.56
HIF3A-215ENST00000533145 MEGF6O75095 1541 aa18.54■□□□□ 0.56
HIF3A-215ENST00000533145 HTATSF1O43719 755 aaKnown RBP18.54■□□□□ 0.56
HIF3A-215ENST00000533145 IL2RBP14784 551 aa18.54■□□□□ 0.56
HIF3A-215ENST00000533145 TRIM35Q9UPQ4 493 aa18.54■□□□□ 0.56
HIF3A-215ENST00000533145 OVOS2A0A0G2JMS6 1433 aa18.54■□□□□ 0.56
HIF3A-215ENST00000533145 DISP2A7MBM2 1401 aa18.54■□□□□ 0.56
HIF3A-215ENST00000533145 AFF2P51816 1311 aa18.53■□□□□ 0.56
HIF3A-215ENST00000533145 BARGINQ6ZT62 677 aa18.53■□□□□ 0.56
HIF3A-215ENST00000533145 WWC1Q8IX03 1113 aa18.53■□□□□ 0.56
HIF3A-215ENST00000533145 RRP7AQ9Y3A4 280 aaKnown RBP18.53■□□□□ 0.56
HIF3A-215ENST00000533145 LMOD3Q0VAK6 560 aa18.52■□□□□ 0.56
HIF3A-215ENST00000533145 PDE3BQ13370 1112 aa18.52■□□□□ 0.56
HIF3A-215ENST00000533145 NEUROD2Q15784 382 aa18.52■□□□□ 0.56
HIF3A-215ENST00000533145 CDCA7Q9BWT1 371 aaPredicted RBP18.52■□□□□ 0.56
HIF3A-215ENST00000533145 SPG7Q9UQ90 795 aa18.52■□□□□ 0.56
HIF3A-215ENST00000533145 WDR63Q8IWG1 891 aa18.51■□□□□ 0.55
HIF3A-215ENST00000533145 SALL2Q9Y467 1007 aaPredicted RBP18.51■□□□□ 0.55
HIF3A-215ENST00000533145 ATRNO75882 1429 aa18.5■□□□□ 0.55
HIF3A-215ENST00000533145 SENP3-EIF4A1A0A087X0R7 540 aa18.5■□□□□ 0.55
HIF3A-215ENST00000533145 AKAP4Q5JQC9 854 aa18.5■□□□□ 0.55
HIF3A-215ENST00000533145 SHANK3Q9BYB0 1731 aa18.49■□□□□ 0.55
HIF3A-215ENST00000533145 VIRMAQ69YN4 1812 aaKnown RBP18.49■□□□□ 0.55
HIF3A-215ENST00000533145 GNAT3A8MTJ3 354 aa18.49■□□□□ 0.55
HIF3A-215ENST00000533145 ZCRB1Q8TBF4 217 aaKnown RBP18.49■□□□□ 0.55
HIF3A-215ENST00000533145 USP35Q9P2H5 1018 aa18.49■□□□□ 0.55
HIF3A-215ENST00000533145 TRPC5Q9UL62 973 aaPredicted RBP18.49■□□□□ 0.55
HIF3A-215ENST00000533145 IL16Q14005 1332 aa18.48■□□□□ 0.55
HIF3A-215ENST00000533145 ADAMTS7Q9UKP4 1686 aa18.47■□□□□ 0.55
HIF3A-215ENST00000533145 MAP3K5Q99683 1374 aa18.47■□□□□ 0.55
HIF3A-215ENST00000533145 GOLGA2Q08379 1002 aa18.47■□□□□ 0.55
HIF3A-215ENST00000533145 ZNF530Q6P9A1 599 aaPredicted RBP18.47■□□□□ 0.55
HIF3A-215ENST00000533145 C1orf141Q5JVX7 400 aa18.46■□□□□ 0.55
HIF3A-215ENST00000533145 IFNL2Q8IZJ0 200 aa18.46■□□□□ 0.55
HIF3A-215ENST00000533145 GJD4Q96KN9 370 aaPredicted RBP18.46■□□□□ 0.55
HIF3A-215ENST00000533145 CCDC9Q9Y3X0 531 aaKnown RBP18.46■□□□□ 0.55
HIF3A-215ENST00000533145 ONECUT3O60422 494 aaPredicted RBP18.45■□□□□ 0.54
HIF3A-215ENST00000533145 PHKG2P15735 406 aa18.45■□□□□ 0.54
HIF3A-215ENST00000533145 CALD1Q05682 793 aaKnown RBP18.45■□□□□ 0.54
HIF3A-215ENST00000533145 ZNF772Q68DY9 489 aaPredicted RBP18.45■□□□□ 0.54
HIF3A-215ENST00000533145 TRMT2AQ8IZ69 625 aaKnown RBP18.45■□□□□ 0.54
HIF3A-215ENST00000533145 RTF1Q92541 710 aaKnown RBP18.45■□□□□ 0.54
HIF3A-215ENST00000533145 QTRT2Q9H974 415 aaKnown RBP18.45■□□□□ 0.54
HIF3A-215ENST00000533145 GLI3P10071 1580 aa18.45■□□□□ 0.54
HIF3A-215ENST00000533145 PCDH11XQ9BZA7 1347 aa18.45■□□□□ 0.54
HIF3A-215ENST00000533145 PCDH11YQ9BZA8 1340 aa18.45■□□□□ 0.54
HIF3A-215ENST00000533145 SCN11AQ9UI33 1791 aa18.45■□□□□ 0.54
HIF3A-215ENST00000533145 EXOC5O00471 708 aa18.44■□□□□ 0.54
HIF3A-215ENST00000533145 CYP27B1O15528 508 aa18.44■□□□□ 0.54
HIF3A-215ENST00000533145 HSP90AB1P08238 724 aaKnown RBP18.44■□□□□ 0.54
HIF3A-215ENST00000533145 SLFN5Q08AF3 891 aa18.44■□□□□ 0.54
HIF3A-215ENST00000533145 NKX1-1Q15270 411 aaPredicted RBP18.44■□□□□ 0.54
HIF3A-215ENST00000533145 IL17REQ8NFR9 667 aa18.44■□□□□ 0.54
HIF3A-215ENST00000533145 CEMIPQ8WUJ3 1361 aa18.43■□□□□ 0.54
HIF3A-215ENST00000533145 LRRC37A3O60309 1634 aa18.43■□□□□ 0.54
HIF3A-215ENST00000533145 TNS2Q63HR2 1409 aa18.42■□□□□ 0.54
HIF3A-215ENST00000533145 THSD7AQ9UPZ6 1657 aa18.42■□□□□ 0.54
HIF3A-215ENST00000533145 E9PSI1 815 aa18.42■□□□□ 0.54
HIF3A-215ENST00000533145 RNMTO43148 476 aaKnown RBP18.41■□□□□ 0.54
HIF3A-215ENST00000533145 ZNF853P0CG23 659 aa18.41■□□□□ 0.54
HIF3A-215ENST00000533145 DCTN1Q14203 1278 aa18.41■□□□□ 0.54
HIF3A-215ENST00000533145 MCM10Q7L590 875 aa18.41■□□□□ 0.54
HIF3A-215ENST00000533145 CDCA7LQ96GN5 454 aa18.41■□□□□ 0.54
HIF3A-215ENST00000533145 DDB1Q16531 1140 aa18.4■□□□□ 0.54
HIF3A-215ENST00000533145 FAM98CQ17RN3 349 aaKnown RBP18.4■□□□□ 0.54
HIF3A-215ENST00000533145 DCAF5Q96JK2 942 aa18.4■□□□□ 0.54
HIF3A-215ENST00000533145 LGR6Q9HBX8 967 aa18.4■□□□□ 0.54
HIF3A-215ENST00000533145 SPINK5Q9NQ38 1064 aaPredicted RBP18.4■□□□□ 0.54
HIF3A-215ENST00000533145 IFT57Q9NWB7 429 aa18.4■□□□□ 0.54
HIF3A-215ENST00000533145 CENPBP07199 599 aaPredicted RBP18.39■□□□□ 0.53
HIF3A-215ENST00000533145 CFAP44Q96MT7 982 aa18.39■□□□□ 0.53
HIF3A-215ENST00000533145 THUMPD2Q9BTF0 503 aaKnown RBP18.39■□□□□ 0.53
HIF3A-215ENST00000533145 BABAM1Q9NWV8 329 aa18.39■□□□□ 0.53
HIF3A-215ENST00000533145 SIPA1L3O60292 1781 aaPredicted RBP18.39■□□□□ 0.53
HIF3A-215ENST00000533145 GNAI1P63096 354 aa18.38■□□□□ 0.53
HIF3A-215ENST00000533145 DUSP27Q5VZP5 1158 aa18.38■□□□□ 0.53
HIF3A-215ENST00000533145 MPRIPQ6WCQ1 1025 aa18.38■□□□□ 0.53
HIF3A-215ENST00000533145 KDM6AO15550 1401 aaPredicted RBP18.38■□□□□ 0.53
HIF3A-215ENST00000533145 CHL1O00533 1208 aa18.37■□□□□ 0.53
HIF3A-215ENST00000533145 DDX54Q8TDD1 881 aaKnown RBP18.37■□□□□ 0.53
HIF3A-215ENST00000533145 MYH16Q9H6N6 1097 aa18.37■□□□□ 0.53
HIF3A-215ENST00000533145 MRC1P22897 1456 aa18.36■□□□□ 0.53
HIF3A-215ENST00000533145 RBM6P78332 1123 aaKnown RBP18.36■□□□□ 0.53
HIF3A-215ENST00000533145 TAF7Q15545 349 aaPredicted RBP18.36■□□□□ 0.53
HIF3A-215ENST00000533145 ERVV-2B6SEH9 535 aa18.35■□□□□ 0.53
HIF3A-215ENST00000533145 SLC52A2Q9HAB3 445 aa18.34■□□□□ 0.53
HIF3A-215ENST00000533145 TEFQ10587 303 aa18.33■□□□□ 0.52
HIF3A-215ENST00000533145 MARCH10Q8NA82 808 aaPredicted RBP18.33■□□□□ 0.52
HIF3A-215ENST00000533145 ITGB4P16144 1822 aa18.33■□□□□ 0.52
HIF3A-215ENST00000533145 KDM3BQ7LBC6 1761 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms