RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 NHSQ6T4R5 1651 aa41.56■■■■■ 4.24
SSSCA1-207ENST00000533115 KNSTRNQ9Y448 316 aa41.56■■■■■ 4.24
SSSCA1-207ENST00000533115 ZCRB1Q8TBF4 217 aaKnown RBP41.55■■■■■ 4.24
SSSCA1-207ENST00000533115 RAPGEF4Q8WZA2 1011 aa41.54■■■■■ 4.24
SSSCA1-207ENST00000533115 NBPF14Q5TI25 921 aa41.53■■■■■ 4.24
SSSCA1-207ENST00000533115 TATP17735 454 aaPredicted RBP41.5■■■■■ 4.23
SSSCA1-207ENST00000533115 SHANK3Q9BYB0 1731 aa41.49■■■■■ 4.23
SSSCA1-207ENST00000533115 MORC1Q86VD1 984 aa41.48■■■■■ 4.23
SSSCA1-207ENST00000533115 PROM2Q8N271 834 aa41.47■■■■■ 4.23
SSSCA1-207ENST00000533115 KAT6BQ8WYB5 2073 aa41.45■■■■■ 4.23
SSSCA1-207ENST00000533115 NCAPD2Q15021 1401 aa41.44■■■■■ 4.22
SSSCA1-207ENST00000533115 TXNRD1Q16881 649 aa41.42■■■■■ 4.22
SSSCA1-207ENST00000533115 AMER1Q5JTC6 1135 aaPredicted RBP41.42■■■■■ 4.22
SSSCA1-207ENST00000533115 EYA1Q99502 592 aa41.41■■■■■ 4.22
SSSCA1-207ENST00000533115 BTAF1O14981 1849 aa41.41■■■■■ 4.22
SSSCA1-207ENST00000533115 EIF4A2Q14240 407 aaKnown RBP41.39■■■■■ 4.22
SSSCA1-207ENST00000533115 LRP5O75197 1615 aa41.39■■■■■ 4.22
SSSCA1-207ENST00000533115 PER1O15534 1290 aaPredicted RBP41.36■■■■■ 4.21
SSSCA1-207ENST00000533115 PCDH11XQ9BZA7 1347 aa41.36■■■■■ 4.21
SSSCA1-207ENST00000533115 PCDH11YQ9BZA8 1340 aa41.36■■■■■ 4.21
SSSCA1-207ENST00000533115 PRIM1P49642 420 aaKnown RBP41.35■■■■■ 4.21
SSSCA1-207ENST00000533115 DOT1LQ8TEK3 1739 aa41.35■■■■■ 4.21
SSSCA1-207ENST00000533115 ANO8Q9HCE9 1232 aaPredicted RBP41.34■■■■■ 4.21
SSSCA1-207ENST00000533115 SYTL4Q96C24 671 aaPredicted RBP41.33■■■■■ 4.21
SSSCA1-207ENST00000533115 PKD1L3Q7Z443 1732 aa41.3■■■■■ 4.2
SSSCA1-207ENST00000533115 CYP27B1O15528 508 aa41.27■■■■■ 4.2
SSSCA1-207ENST00000533115 SPG7Q9UQ90 795 aa41.26■■■■■ 4.2
SSSCA1-207ENST00000533115 IGSF1Q8N6C5 1336 aa41.25■■■■■ 4.19
SSSCA1-207ENST00000533115 STK32BQ9NY57 414 aa41.24■■■■■ 4.19
SSSCA1-207ENST00000533115 CC2D1BQ5T0F9 858 aaKnown RBP41.23■■■■■ 4.19
SSSCA1-207ENST00000533115 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP41.23■■■■■ 4.19
SSSCA1-207ENST00000533115 SLC15A2Q16348 729 aa41.2■■■■■ 4.19
SSSCA1-207ENST00000533115 LRRC4BQ9NT99 713 aa41.19■■■■■ 4.18
SSSCA1-207ENST00000533115 NPC1L1Q9UHC9 1359 aa41.18■■■■■ 4.18
SSSCA1-207ENST00000533115 SLC27A3Q5K4L6 730 aa41.18■■■■■ 4.18
SSSCA1-207ENST00000533115 PLEKHG2Q9H7P9 1386 aa41.17■■■■■ 4.18
SSSCA1-207ENST00000533115 PAPPAQ13219 1627 aa41.17■■■■■ 4.18
SSSCA1-207ENST00000533115 NKX1-1Q15270 411 aaPredicted RBP41.16■■■■■ 4.18
SSSCA1-207ENST00000533115 MTHFSP49914 203 aa41.14■■■■■ 4.18
SSSCA1-207ENST00000533115 CASZ1Q86V15 1759 aa41.12■■■■■ 4.17
SSSCA1-207ENST00000533115 IL13P35225 146 aa41.12■■■■■ 4.17
SSSCA1-207ENST00000533115 LY75O60449 1722 aa41.12■■■■■ 4.17
SSSCA1-207ENST00000533115 TOGARAM1Q9Y4F4 1720 aa41.12■■■■■ 4.17
SSSCA1-207ENST00000533115 IFNL2Q8IZJ0 200 aa41.11■■■■■ 4.17
SSSCA1-207ENST00000533115 PHKG2P15735 406 aa41.1■■■■■ 4.17
SSSCA1-207ENST00000533115 MPRIPQ6WCQ1 1025 aa41.1■■■■■ 4.17
SSSCA1-207ENST00000533115 PDGFDQ9GZP0 370 aaPredicted RBP41.1■■■■■ 4.17
SSSCA1-207ENST00000533115 SPON1Q9HCB6 807 aa41.1■■■■■ 4.17
SSSCA1-207ENST00000533115 CNGB1Q14028 1251 aaPredicted RBP41.08■■■■■ 4.17
SSSCA1-207ENST00000533115 AEBP1Q8IUX7 1158 aa41.07■■■■■ 4.17
SSSCA1-207ENST00000533115 ITGB4P16144 1822 aa41.07■■■■■ 4.16
SSSCA1-207ENST00000533115 ZNF827Q17R98 1081 aa41.06■■■■■ 4.16
SSSCA1-207ENST00000533115 KCNQ4P56696 695 aa41.05■■■■■ 4.16
SSSCA1-207ENST00000533115 PLEKHO1Q53GL0 409 aaPredicted RBP41.05■■■■■ 4.16
SSSCA1-207ENST00000533115 SULT6B1Q6IMI4 303 aa41.05■■■■■ 4.16
SSSCA1-207ENST00000533115 CCNL1Q9UK58 526 aaPredicted RBP41.04■■■■■ 4.16
SSSCA1-207ENST00000533115 AKT1S1Q96B36 256 aa41.03■■■■■ 4.16
SSSCA1-207ENST00000533115 AMOTQ4VCS5 1084 aa41.02■■■■■ 4.16
SSSCA1-207ENST00000533115 KDRP35968 1356 aa41.01■■■■■ 4.16
SSSCA1-207ENST00000533115 PIGBQ92521 554 aa41.01■■■■■ 4.16
SSSCA1-207ENST00000533115 PALLDQ8WX93 1383 aa40.99■■■■■ 4.15
SSSCA1-207ENST00000533115 ZBTB7AO95365 584 aa40.99■■■■■ 4.15
SSSCA1-207ENST00000533115 SMARCC1Q92922 1105 aaPredicted RBP40.97■■■■■ 4.15
SSSCA1-207ENST00000533115 DIAPH1O60610 1272 aaKnown RBP40.96■■■■■ 4.15
SSSCA1-207ENST00000533115 ZNF530Q6P9A1 599 aaPredicted RBP40.96■■■■■ 4.15
SSSCA1-207ENST00000533115 TMOD3Q9NYL9 352 aa40.96■■■■■ 4.15
SSSCA1-207ENST00000533115 HSP90AB1P08238 724 aaKnown RBP40.95■■■■■ 4.15
SSSCA1-207ENST00000533115 PPP1R1BQ9UD71 204 aaPredicted RBP40.93■■■■■ 4.14
SSSCA1-207ENST00000533115 DCAF5Q96JK2 942 aa40.92■■■■■ 4.14
SSSCA1-207ENST00000533115 MTFR1LQ9H019 292 aa40.92■■■■■ 4.14
SSSCA1-207ENST00000533115 TFCP2L1Q9NZI6 479 aa40.92■■■■■ 4.14
SSSCA1-207ENST00000533115 ATF5Q9Y2D1 282 aaPredicted RBP40.92■■■■■ 4.14
SSSCA1-207ENST00000533115 QSER1Q2KHR3 1735 aa40.9■■■■■ 4.14
SSSCA1-207ENST00000533115 ERVV-2B6SEH9 535 aa40.89■■■■■ 4.14
SSSCA1-207ENST00000533115 COL3A1P02461 1466 aaPredicted RBP40.89■■■■■ 4.14
SSSCA1-207ENST00000533115 HMOX1P09601 288 aa40.88■■■■■ 4.13
SSSCA1-207ENST00000533115 HMGB2P26583 209 aaKnown RBP40.88■■■■■ 4.13
SSSCA1-207ENST00000533115 C1orf141Q5JVX7 400 aa40.88■■■■■ 4.13
SSSCA1-207ENST00000533115 PNPLA7Q6ZV29 1317 aa40.88■■■■■ 4.13
SSSCA1-207ENST00000533115 PTGER2P43116 358 aa40.87■■■■■ 4.13
SSSCA1-207ENST00000533115 C5P01031 1676 aa40.86■■■■■ 4.13
SSSCA1-207ENST00000533115 KDM6AO15550 1401 aaPredicted RBP40.85■■■■■ 4.13
SSSCA1-207ENST00000533115 ASAP1Q9ULH1 1129 aa40.85■■■■■ 4.13
SSSCA1-207ENST00000533115 TUBGCP6Q96RT7 1819 aa40.85■■■■■ 4.13
SSSCA1-207ENST00000533115 TAF1LQ8IZX4 1826 aa40.82■■■■■ 4.13
SSSCA1-207ENST00000533115 SLC16A10Q8TF71 515 aa40.81■■■■■ 4.12
SSSCA1-207ENST00000533115 ATG3Q9NT62 314 aa40.81■■■■■ 4.12
SSSCA1-207ENST00000533115 LOC102724428A0A0B4J2F2 783 aa40.8■■■■■ 4.12
SSSCA1-207ENST00000533115 SIK1P57059 783 aa40.8■■■■■ 4.12
SSSCA1-207ENST00000533115 SGIP1Q9BQI5 828 aa40.79■■■■■ 4.12
SSSCA1-207ENST00000533115 CABP4P57796 275 aa40.78■■■■■ 4.12
SSSCA1-207ENST00000533115 U2SURPO15042 1029 aaKnown RBP40.77■■■■■ 4.12
SSSCA1-207ENST00000533115 PPP2R1AP30153 589 aa40.77■■■■■ 4.12
SSSCA1-207ENST00000533115 AKAP4Q5JQC9 854 aa40.77■■■■■ 4.12
SSSCA1-207ENST00000533115 CFAP53Q96M91 514 aa40.77■■■■■ 4.12
SSSCA1-207ENST00000533115 C4BP0C0L5 1744 aa40.74■■■■■ 4.11
SSSCA1-207ENST00000533115 COL23A1Q86Y22 540 aaPredicted RBP40.72■■■■■ 4.11
SSSCA1-207ENST00000533115 ATP6V1AP38606 617 aa40.71■■■■■ 4.11
SSSCA1-207ENST00000533115 MTHFSDQ2M296 383 aaKnown RBP40.71■■■■■ 4.11
SSSCA1-207ENST00000533115 MSH5O43196 834 aa40.7■■■■■ 4.11
Retrieved 100 of 20,778 RNA–protein pairs in 242.8 ms