RNA–Protein interactions for RNA: ENST00000533000.5

UBXN1-214, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-214ENST00000533000 POLD1P28340 1107 aa19.6■□□□□ 0.73
UBXN1-214ENST00000533000 PUS7Q96PZ0 661 aaKnown RBP19.6■□□□□ 0.73
UBXN1-214ENST00000533000 TESK2Q96S53 571 aa19.6■□□□□ 0.73
UBXN1-214ENST00000533000 MEGF6O75095 1541 aa19.6■□□□□ 0.73
UBXN1-214ENST00000533000 FAM208AQ9UK61 1670 aaKnown RBP19.59■□□□□ 0.73
UBXN1-214ENST00000533000 PELP1Q8IZL8 1130 aaKnown RBP19.59■□□□□ 0.73
UBXN1-214ENST00000533000 TUBGCP6Q96RT7 1819 aa19.59■□□□□ 0.73
UBXN1-214ENST00000533000 QSER1Q2KHR3 1735 aa19.59■□□□□ 0.73
UBXN1-214ENST00000533000 ZCRB1Q8TBF4 217 aaKnown RBP19.58■□□□□ 0.72
UBXN1-214ENST00000533000 NBPF6Q5VWK0 638 aa19.57■□□□□ 0.72
UBXN1-214ENST00000533000 COG3Q96JB2 828 aa19.57■□□□□ 0.72
UBXN1-214ENST00000533000 NBPF4Q96M43 638 aa19.57■□□□□ 0.72
UBXN1-214ENST00000533000 DOT1LQ8TEK3 1739 aa19.56■□□□□ 0.72
UBXN1-214ENST00000533000 SHANK3Q9BYB0 1731 aa19.56■□□□□ 0.72
UBXN1-214ENST00000533000 YBX3P16989 372 aaKnown RBP eCLIP19.56■□□□□ 0.72
UBXN1-214ENST00000533000 AMPHP49418 695 aa19.56■□□□□ 0.72
UBXN1-214ENST00000533000 COL23A1Q86Y22 540 aaPredicted RBP19.56■□□□□ 0.72
UBXN1-214ENST00000533000 USHBP1Q8N6Y0 703 aa19.56■□□□□ 0.72
UBXN1-214ENST00000533000 CCNL1Q9UK58 526 aaPredicted RBP19.56■□□□□ 0.72
UBXN1-214ENST00000533000 RGPD2P0DJD1 1756 aa19.55■□□□□ 0.72
UBXN1-214ENST00000533000 ST20-MTHFSA0A0A6YYL1 179 aa19.55■□□□□ 0.72
UBXN1-214ENST00000533000 LY75O60449 1722 aa19.55■□□□□ 0.72
UBXN1-214ENST00000533000 RRS1Q15050 365 aaKnown RBP19.54■□□□□ 0.72
UBXN1-214ENST00000533000 GIGYF1O75420 1035 aaPredicted RBP19.52■□□□□ 0.72
UBXN1-214ENST00000533000 MSL1Q68DK7 614 aa19.52■□□□□ 0.72
UBXN1-214ENST00000533000 MSH5O43196 834 aa19.51■□□□□ 0.71
UBXN1-214ENST00000533000 GGNBP2Q9H3C7 697 aa19.51■□□□□ 0.71
UBXN1-214ENST00000533000 TONSLQ96HA7 1378 aa19.5■□□□□ 0.71
UBXN1-214ENST00000533000 USP47Q96K76 1375 aa19.5■□□□□ 0.71
UBXN1-214ENST00000533000 FYB1O15117 783 aa19.5■□□□□ 0.71
UBXN1-214ENST00000533000 CEP350Q5VT06 3117 aa19.5■□□□□ 0.71
UBXN1-214ENST00000533000 RTL1A6NKG5 1358 aa19.48■□□□□ 0.71
UBXN1-214ENST00000533000 HSP90AB2PQ58FF8 381 aa19.47■□□□□ 0.71
UBXN1-214ENST00000533000 AMIGO3Q86WK7 504 aa19.47■□□□□ 0.71
UBXN1-214ENST00000533000 GRIN3BO60391 1043 aa19.46■□□□□ 0.71
UBXN1-214ENST00000533000 SMIM5Q71RC9 77 aa19.46■□□□□ 0.71
UBXN1-214ENST00000533000 RAPGEF4Q8WZA2 1011 aa19.46■□□□□ 0.71
UBXN1-214ENST00000533000 CYP27B1O15528 508 aa19.45■□□□□ 0.7
UBXN1-214ENST00000533000 CGNL1Q0VF96 1302 aa19.45■□□□□ 0.7
UBXN1-214ENST00000533000 TATP17735 454 aaPredicted RBP19.44■□□□□ 0.7
UBXN1-214ENST00000533000 PALLDQ8WX93 1383 aa19.44■□□□□ 0.7
UBXN1-214ENST00000533000 MPRIPQ6WCQ1 1025 aa19.43■□□□□ 0.7
UBXN1-214ENST00000533000 INSRP06213 1382 aa19.43■□□□□ 0.7
UBXN1-214ENST00000533000 ATP10DQ9P241 1426 aa19.42■□□□□ 0.7
UBXN1-214ENST00000533000 C5P01031 1676 aa19.41■□□□□ 0.7
UBXN1-214ENST00000533000 CD2APQ9Y5K6 639 aa19.41■□□□□ 0.7
UBXN1-214ENST00000533000 PCDH11XQ9BZA7 1347 aa19.41■□□□□ 0.7
UBXN1-214ENST00000533000 PCDH11YQ9BZA8 1340 aa19.41■□□□□ 0.7
UBXN1-214ENST00000533000 SMG6Q86US8 1419 aaKnown RBP19.4■□□□□ 0.7
UBXN1-214ENST00000533000 PIGBQ92521 554 aa19.39■□□□□ 0.69
UBXN1-214ENST00000533000 SLC24A1O60721 1099 aa19.38■□□□□ 0.69
UBXN1-214ENST00000533000 FLT4P35916 1363 aa19.38■□□□□ 0.69
UBXN1-214ENST00000533000 FLAD1Q8NFF5 587 aa19.38■□□□□ 0.69
UBXN1-214ENST00000533000 CARD14Q9BXL6 1004 aa19.38■□□□□ 0.69
UBXN1-214ENST00000533000 WWC3Q9ULE0 1092 aa19.38■□□□□ 0.69
UBXN1-214ENST00000533000 TOGARAM1Q9Y4F4 1720 aa19.38■□□□□ 0.69
UBXN1-214ENST00000533000 EMILIN1Q9Y6C2 1016 aa19.38■□□□□ 0.69
UBXN1-214ENST00000533000 TMF1P82094 1093 aa19.37■□□□□ 0.69
UBXN1-214ENST00000533000 TAF1LQ8IZX4 1826 aa19.37■□□□□ 0.69
UBXN1-214ENST00000533000 ADCY9O60503 1353 aa19.36■□□□□ 0.69
UBXN1-214ENST00000533000 PHF14O94880 888 aa19.36■□□□□ 0.69
UBXN1-214ENST00000533000 C4BP0C0L5 1744 aa19.36■□□□□ 0.69
UBXN1-214ENST00000533000 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.35■□□□□ 0.69
UBXN1-214ENST00000533000 AK7Q96M32 723 aa19.35■□□□□ 0.69
UBXN1-214ENST00000533000 NKX1-1Q15270 411 aaPredicted RBP19.34■□□□□ 0.69
UBXN1-214ENST00000533000 LINC00116Q8NCU8 138 aa19.34■□□□□ 0.69
UBXN1-214ENST00000533000 ZNF526Q8TF50 670 aaPredicted RBP19.34■□□□□ 0.69
UBXN1-214ENST00000533000 SMARCC1Q92922 1105 aaPredicted RBP19.34■□□□□ 0.69
UBXN1-214ENST00000533000 KIF24Q5T7B8 1368 aa19.33■□□□□ 0.69
UBXN1-214ENST00000533000 IGSF1Q8N6C5 1336 aa19.33■□□□□ 0.69
UBXN1-214ENST00000533000 IFFO2Q5TF58 517 aa19.33■□□□□ 0.68
UBXN1-214ENST00000533000 GPBP1L1Q9HC44 474 aaPredicted RBP19.33■□□□□ 0.68
UBXN1-214ENST00000533000 NCAPD2Q15021 1401 aa19.33■□□□□ 0.68
UBXN1-214ENST00000533000 ITGB4P16144 1822 aa19.32■□□□□ 0.68
UBXN1-214ENST00000533000 LOC102724428A0A0B4J2F2 783 aa19.31■□□□□ 0.68
UBXN1-214ENST00000533000 SIK1P57059 783 aa19.31■□□□□ 0.68
UBXN1-214ENST00000533000 ITPK1Q13572 414 aa19.31■□□□□ 0.68
UBXN1-214ENST00000533000 ASAP1Q9ULH1 1129 aa19.31■□□□□ 0.68
UBXN1-214ENST00000533000 PKD1L3Q7Z443 1732 aa19.31■□□□□ 0.68
UBXN1-214ENST00000533000 UBR3Q6ZT12 1888 aa19.31■□□□□ 0.68
UBXN1-214ENST00000533000 KIF20BQ96Q89 1820 aa19.3■□□□□ 0.68
UBXN1-214ENST00000533000 EYA1Q99502 592 aa19.3■□□□□ 0.68
UBXN1-214ENST00000533000 NSD3Q9BZ95 1437 aa19.3■□□□□ 0.68
UBXN1-214ENST00000533000 MAP2P11137 1827 aaKnown RBP19.3■□□□□ 0.68
UBXN1-214ENST00000533000 PPM1GO15355 546 aaPredicted RBP19.29■□□□□ 0.68
UBXN1-214ENST00000533000 SSFA2P28290 1259 aa19.29■□□□□ 0.68
UBXN1-214ENST00000533000 HMGB2P26583 209 aaKnown RBP19.28■□□□□ 0.68
UBXN1-214ENST00000533000 SPG7Q9UQ90 795 aa19.28■□□□□ 0.68
UBXN1-214ENST00000533000 WASHC2AQ641Q2 1341 aa19.27■□□□□ 0.68
UBXN1-214ENST00000533000 GNPATO15228 680 aa19.26■□□□□ 0.67
UBXN1-214ENST00000533000 HSPA6P17066 643 aa19.26■□□□□ 0.67
UBXN1-214ENST00000533000 ATG3Q9NT62 314 aa19.26■□□□□ 0.67
UBXN1-214ENST00000533000 TMOD3Q9NYL9 352 aa19.26■□□□□ 0.67
UBXN1-214ENST00000533000 KIF3CO14782 793 aa19.25■□□□□ 0.67
UBXN1-214ENST00000533000 PHKG2P15735 406 aa19.25■□□□□ 0.67
UBXN1-214ENST00000533000 ATP6V1AP38606 617 aa19.25■□□□□ 0.67
UBXN1-214ENST00000533000 CDCA8Q53HL2 280 aa19.24■□□□□ 0.67
UBXN1-214ENST00000533000 SLC4A9Q96Q91 983 aa19.24■□□□□ 0.67
UBXN1-214ENST00000533000 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.24■□□□□ 0.67
UBXN1-214ENST00000533000 POLKQ9UBT6 870 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms