RNA–Protein interactions for RNA: ENST00000532877.1

COL16A1-217, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 534 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-217ENST00000532877 EN1Q05925 392 aaPredicted RBP19■□□□□ 0.63
COL16A1-217ENST00000532877 TOM1L2Q6ZVM7 507 aa19■□□□□ 0.63
COL16A1-217ENST00000532877 PRKAR2BP31323 418 aa18.98■□□□□ 0.63
COL16A1-217ENST00000532877 CCDC146Q8IYE0 955 aa18.98■□□□□ 0.63
COL16A1-217ENST00000532877 CARD10Q9BWT7 1032 aa18.98■□□□□ 0.63
COL16A1-217ENST00000532877 WNK3Q9BYP7 1800 aa18.97■□□□□ 0.63
COL16A1-217ENST00000532877 R3HDM1Q15032 1099 aaKnown RBP18.97■□□□□ 0.63
COL16A1-217ENST00000532877 PLEKHF1Q96S99 279 aa18.97■□□□□ 0.63
COL16A1-217ENST00000532877 FAM98CQ17RN3 349 aaKnown RBP18.96■□□□□ 0.63
COL16A1-217ENST00000532877 MEGF6O75095 1541 aa18.95■□□□□ 0.62
COL16A1-217ENST00000532877 NUP188Q5SRE5 1749 aa18.95■□□□□ 0.62
COL16A1-217ENST00000532877 PARP4Q9UKK3 1724 aaKnown RBP18.95■□□□□ 0.62
COL16A1-217ENST00000532877 RUNDC1Q96C34 613 aa18.95■□□□□ 0.62
COL16A1-217ENST00000532877 PNNQ9H307 717 aaKnown RBP18.95■□□□□ 0.62
COL16A1-217ENST00000532877 CAMKK2Q96RR4 588 aa18.94■□□□□ 0.62
COL16A1-217ENST00000532877 CCDC9Q9Y3X0 531 aaKnown RBP18.94■□□□□ 0.62
COL16A1-217ENST00000532877 SPATA31A1Q5TZJ5 1347 aa18.94■□□□□ 0.62
COL16A1-217ENST00000532877 SPATA31A5Q5VU36 1347 aa18.94■□□□□ 0.62
COL16A1-217ENST00000532877 SPATA31A7Q8IWB4 1347 aa18.94■□□□□ 0.62
COL16A1-217ENST00000532877 MAPK8IP3Q9UPT6 1336 aa18.94■□□□□ 0.62
COL16A1-217ENST00000532877 USP35Q9P2H5 1018 aa18.93■□□□□ 0.62
COL16A1-217ENST00000532877 PKD1L3Q7Z443 1732 aa18.92■□□□□ 0.62
COL16A1-217ENST00000532877 FAM182BQ5T319 152 aa18.92■□□□□ 0.62
COL16A1-217ENST00000532877 RAPGEF4Q8WZA2 1011 aa18.92■□□□□ 0.62
COL16A1-217ENST00000532877 PHACTR3Q96KR7 559 aa18.92■□□□□ 0.62
COL16A1-217ENST00000532877 PLEKHG2Q9H7P9 1386 aa18.92■□□□□ 0.62
COL16A1-217ENST00000532877 OVOS2A0A0G2JMS6 1433 aa18.91■□□□□ 0.62
COL16A1-217ENST00000532877 EZH2Q15910 746 aaKnown RBP18.91■□□□□ 0.62
COL16A1-217ENST00000532877 TCP11L2Q8N4U5 519 aa18.91■□□□□ 0.62
COL16A1-217ENST00000532877 NEFMP07197 916 aa18.9■□□□□ 0.62
COL16A1-217ENST00000532877 SENP3-EIF4A1A0A087X0R7 540 aa18.89■□□□□ 0.61
COL16A1-217ENST00000532877 APAF1O14727 1248 aa18.89■□□□□ 0.61
COL16A1-217ENST00000532877 IL2RBP14784 551 aa18.89■□□□□ 0.61
COL16A1-217ENST00000532877 TATP17735 454 aaPredicted RBP18.89■□□□□ 0.61
COL16A1-217ENST00000532877 THRAP3Q9Y2W1 955 aaKnown RBP18.89■□□□□ 0.61
COL16A1-217ENST00000532877 DLG5Q8TDM6 1919 aa18.89■□□□□ 0.61
COL16A1-217ENST00000532877 HNRNPUQ00839 825 aaKnown RBP eCLIP18.88■□□□□ 0.61
COL16A1-217ENST00000532877 YTHDC1Q96MU7 727 aaKnown RBP18.88■□□□□ 0.61
COL16A1-217ENST00000532877 SHANK3Q9BYB0 1731 aa18.88■□□□□ 0.61
COL16A1-217ENST00000532877 NFE2L2Q16236 605 aa18.87■□□□□ 0.61
COL16A1-217ENST00000532877 LRRC37A3O60309 1634 aa18.86■□□□□ 0.61
COL16A1-217ENST00000532877 TMPOP42166 694 aaKnown RBP18.86■□□□□ 0.61
COL16A1-217ENST00000532877 MTHFSDQ2M296 383 aaKnown RBP18.86■□□□□ 0.61
COL16A1-217ENST00000532877 BARGINQ6ZT62 677 aa18.86■□□□□ 0.61
COL16A1-217ENST00000532877 RRP7AQ9Y3A4 280 aaKnown RBP18.86■□□□□ 0.61
COL16A1-217ENST00000532877 AMOTQ4VCS5 1084 aa18.85■□□□□ 0.61
COL16A1-217ENST00000532877 PLEKHO1Q53GL0 409 aaPredicted RBP18.85■□□□□ 0.61
COL16A1-217ENST00000532877 GAS2L2Q8NHY3 880 aa18.85■□□□□ 0.61
COL16A1-217ENST00000532877 TNS2Q63HR2 1409 aa18.84■□□□□ 0.61
COL16A1-217ENST00000532877 A0A0G2JS52 829 aa18.84■□□□□ 0.61
COL16A1-217ENST00000532877 YY1P25490 414 aa18.84■□□□□ 0.61
COL16A1-217ENST00000532877 MYT1Q01538 1121 aa18.84■□□□□ 0.61
COL16A1-217ENST00000532877 CDCA7Q9BWT1 371 aaPredicted RBP18.84■□□□□ 0.61
COL16A1-217ENST00000532877 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.84■□□□□ 0.61
COL16A1-217ENST00000532877 NEUROD2Q15784 382 aa18.83■□□□□ 0.6
COL16A1-217ENST00000532877 SPG7Q9UQ90 795 aa18.83■□□□□ 0.6
COL16A1-217ENST00000532877 UTRNP46939 3433 aa18.82■□□□□ 0.6
COL16A1-217ENST00000532877 RIPK4P57078 832 aa18.82■□□□□ 0.6
COL16A1-217ENST00000532877 ZNF530Q6P9A1 599 aaPredicted RBP18.82■□□□□ 0.6
COL16A1-217ENST00000532877 SALL2Q9Y467 1007 aaPredicted RBP18.82■□□□□ 0.6
COL16A1-217ENST00000532877 MAP3K5Q99683 1374 aa18.81■□□□□ 0.6
COL16A1-217ENST00000532877 RGPD3A6NKT7 1758 aaPredicted RBP18.81■□□□□ 0.6
COL16A1-217ENST00000532877 RGPD4Q7Z3J3 1758 aa18.81■□□□□ 0.6
COL16A1-217ENST00000532877 TRIM37O94972 964 aa18.81■□□□□ 0.6
COL16A1-217ENST00000532877 NCBP3Q53F19 620 aaKnown RBP18.81■□□□□ 0.6
COL16A1-217ENST00000532877 FAM196AQ6ZSG2 479 aa18.81■□□□□ 0.6
COL16A1-217ENST00000532877 NGEFQ8N5V2 710 aa18.81■□□□□ 0.6
COL16A1-217ENST00000532877 ZCRB1Q8TBF4 217 aaKnown RBP18.81■□□□□ 0.6
COL16A1-217ENST00000532877 ZBED9Q6R2W3 1325 aa18.8■□□□□ 0.6
COL16A1-217ENST00000532877 PCDH11XQ9BZA7 1347 aa18.8■□□□□ 0.6
COL16A1-217ENST00000532877 PCDH11YQ9BZA8 1340 aa18.8■□□□□ 0.6
COL16A1-217ENST00000532877 VIRMAQ69YN4 1812 aaKnown RBP18.79■□□□□ 0.6
COL16A1-217ENST00000532877 SBF2Q86WG5 1849 aa18.79■□□□□ 0.6
COL16A1-217ENST00000532877 CASZ1Q86V15 1759 aa18.79■□□□□ 0.6
COL16A1-217ENST00000532877 CCDC27Q2M243 656 aa18.79■□□□□ 0.6
COL16A1-217ENST00000532877 TRIM35Q9UPQ4 493 aa18.79■□□□□ 0.6
COL16A1-217ENST00000532877 GNAT3A8MTJ3 354 aa18.78■□□□□ 0.6
COL16A1-217ENST00000532877 CYP27B1O15528 508 aa18.78■□□□□ 0.6
COL16A1-217ENST00000532877 LMOD3Q0VAK6 560 aa18.78■□□□□ 0.6
COL16A1-217ENST00000532877 AKAP4Q5JQC9 854 aa18.78■□□□□ 0.6
COL16A1-217ENST00000532877 C1orf141Q5JVX7 400 aa18.78■□□□□ 0.6
COL16A1-217ENST00000532877 ADAMTS7Q9UKP4 1686 aa18.78■□□□□ 0.6
COL16A1-217ENST00000532877 ZNF521Q96K83 1311 aa18.77■□□□□ 0.6
COL16A1-217ENST00000532877 PHKG2P15735 406 aa18.77■□□□□ 0.6
COL16A1-217ENST00000532877 DDB1Q16531 1140 aa18.77■□□□□ 0.6
COL16A1-217ENST00000532877 WWC1Q8IX03 1113 aa18.77■□□□□ 0.6
COL16A1-217ENST00000532877 EXOC5O00471 708 aa18.76■□□□□ 0.59
COL16A1-217ENST00000532877 APBA3O96018 575 aa18.76■□□□□ 0.59
COL16A1-217ENST00000532877 IFNL2Q8IZJ0 200 aa18.76■□□□□ 0.59
COL16A1-217ENST00000532877 SCN11AQ9UI33 1791 aa18.76■□□□□ 0.59
COL16A1-217ENST00000532877 HTATSF1O43719 755 aaKnown RBP18.75■□□□□ 0.59
COL16A1-217ENST00000532877 RTF1Q92541 710 aaKnown RBP18.75■□□□□ 0.59
COL16A1-217ENST00000532877 KDM6AO15550 1401 aaPredicted RBP18.74■□□□□ 0.59
COL16A1-217ENST00000532877 DCTN1Q14203 1278 aa18.74■□□□□ 0.59
COL16A1-217ENST00000532877 MCM10Q7L590 875 aa18.74■□□□□ 0.59
COL16A1-217ENST00000532877 DDX54Q8TDD1 881 aaKnown RBP18.74■□□□□ 0.59
COL16A1-217ENST00000532877 THUMPD2Q9BTF0 503 aaKnown RBP18.74■□□□□ 0.59
COL16A1-217ENST00000532877 TOGARAM1Q9Y4F4 1720 aa18.74■□□□□ 0.59
COL16A1-217ENST00000532877 CEMIPQ8WUJ3 1361 aa18.73■□□□□ 0.59
COL16A1-217ENST00000532877 HSP90AB1P08238 724 aaKnown RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms