RNA–Protein interactions for RNA: ENST00000532771.5

SYVN1-214, Transcript of synoviolin 1, humanhuman

TSL 3

Gene SYVN1, Length 709 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-214ENST00000532771 EMILIN1Q9Y6C2 1016 aa13.19□□□□□ -0.3
SYVN1-214ENST00000532771 CASZ1Q86V15 1759 aa13.18□□□□□ -0.3
SYVN1-214ENST00000532771 SLC15A2Q16348 729 aa13.18□□□□□ -0.3
SYVN1-214ENST00000532771 RAPGEF4Q8WZA2 1011 aa13.18□□□□□ -0.3
SYVN1-214ENST00000532771 SHANK3Q9BYB0 1731 aa13.18□□□□□ -0.3
SYVN1-214ENST00000532771 ANKRD26Q9UPS8 1709 aa13.17□□□□□ -0.3
SYVN1-214ENST00000532771 PDGFDQ9GZP0 370 aaPredicted RBP13.17□□□□□ -0.3
SYVN1-214ENST00000532771 KAT6BQ8WYB5 2073 aa13.17□□□□□ -0.3
SYVN1-214ENST00000532771 TATP17735 454 aaPredicted RBP13.16□□□□□ -0.3
SYVN1-214ENST00000532771 PRIM1P49642 420 aaKnown RBP13.16□□□□□ -0.3
SYVN1-214ENST00000532771 PAPPAQ13219 1627 aa13.16□□□□□ -0.3
SYVN1-214ENST00000532771 WASHC2AQ641Q2 1341 aa13.15□□□□□ -0.3
SYVN1-214ENST00000532771 NCAPD2Q15021 1401 aa13.15□□□□□ -0.3
SYVN1-214ENST00000532771 PPM1GO15355 546 aaPredicted RBP13.15□□□□□ -0.3
SYVN1-214ENST00000532771 SYTL4Q96C24 671 aaPredicted RBP13.15□□□□□ -0.3
SYVN1-214ENST00000532771 PANK3Q9H999 370 aa13.15□□□□□ -0.3
SYVN1-214ENST00000532771 LRRC4BQ9NT99 713 aa13.15□□□□□ -0.3
SYVN1-214ENST00000532771 POLKQ9UBT6 870 aa13.15□□□□□ -0.3
SYVN1-214ENST00000532771 DOT1LQ8TEK3 1739 aa13.15□□□□□ -0.3
SYVN1-214ENST00000532771 NSD2O96028 1365 aa13.15□□□□□ -0.3
SYVN1-214ENST00000532771 PCDH11XQ9BZA7 1347 aa13.14□□□□□ -0.31
SYVN1-214ENST00000532771 PCDH11YQ9BZA8 1340 aa13.14□□□□□ -0.31
SYVN1-214ENST00000532771 SLC27A3Q5K4L6 730 aa13.14□□□□□ -0.31
SYVN1-214ENST00000532771 PPP1R1BQ9UD71 204 aaPredicted RBP13.14□□□□□ -0.31
SYVN1-214ENST00000532771 ZBTB7AO95365 584 aa13.13□□□□□ -0.31
SYVN1-214ENST00000532771 MAP2P11137 1827 aaKnown RBP13.13□□□□□ -0.31
SYVN1-214ENST00000532771 ZNF827Q17R98 1081 aa13.12□□□□□ -0.31
SYVN1-214ENST00000532771 EYA1Q99502 592 aa13.12□□□□□ -0.31
SYVN1-214ENST00000532771 CYP27B1O15528 508 aa13.11□□□□□ -0.31
SYVN1-214ENST00000532771 PTGER2P43116 358 aa13.11□□□□□ -0.31
SYVN1-214ENST00000532771 TNNT2P45379 298 aaPredicted RBP13.11□□□□□ -0.31
SYVN1-214ENST00000532771 AKT1S1Q96B36 256 aa13.11□□□□□ -0.31
SYVN1-214ENST00000532771 MTFR1LQ9H019 292 aa13.11□□□□□ -0.31
SYVN1-214ENST00000532771 LY75O60449 1722 aa13.1□□□□□ -0.31
SYVN1-214ENST00000532771 PKD1L3Q7Z443 1732 aa13.1□□□□□ -0.31
SYVN1-214ENST00000532771 ATF5Q9Y2D1 282 aaPredicted RBP13.1□□□□□ -0.31
SYVN1-214ENST00000532771 KCNQ4P56696 695 aa13.09□□□□□ -0.31
SYVN1-214ENST00000532771 EIF4A2Q14240 407 aaKnown RBP13.09□□□□□ -0.31
SYVN1-214ENST00000532771 SGIP1Q9BQI5 828 aa13.09□□□□□ -0.31
SYVN1-214ENST00000532771 NKX1-1Q15270 411 aaPredicted RBP13.08□□□□□ -0.32
SYVN1-214ENST00000532771 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.08□□□□□ -0.32
SYVN1-214ENST00000532771 CCNL1Q9UK58 526 aaPredicted RBP13.08□□□□□ -0.32
SYVN1-214ENST00000532771 SPG7Q9UQ90 795 aa13.08□□□□□ -0.32
SYVN1-214ENST00000532771 KIF7Q2M1P5 1343 aa13.08□□□□□ -0.32
SYVN1-214ENST00000532771 PLEKHG2Q9H7P9 1386 aa13.07□□□□□ -0.32
SYVN1-214ENST00000532771 KNSTRNQ9Y448 316 aa13.07□□□□□ -0.32
SYVN1-214ENST00000532771 QSER1Q2KHR3 1735 aa13.07□□□□□ -0.32
SYVN1-214ENST00000532771 PNPLA7Q6ZV29 1317 aa13.07□□□□□ -0.32
SYVN1-214ENST00000532771 TOGARAM1Q9Y4F4 1720 aa13.06□□□□□ -0.32
SYVN1-214ENST00000532771 MPRIPQ6WCQ1 1025 aa13.06□□□□□ -0.32
SYVN1-214ENST00000532771 MORC1Q86VD1 984 aa13.06□□□□□ -0.32
SYVN1-214ENST00000532771 SLC16A10Q8TF71 515 aa13.06□□□□□ -0.32
SYVN1-214ENST00000532771 IGSF1Q8N6C5 1336 aa13.06□□□□□ -0.32
SYVN1-214ENST00000532771 TFCP2L1Q9NZI6 479 aa13.05□□□□□ -0.32
SYVN1-214ENST00000532771 PALLDQ8WX93 1383 aa13.05□□□□□ -0.32
SYVN1-214ENST00000532771 PHKG2P15735 406 aa13.04□□□□□ -0.32
SYVN1-214ENST00000532771 AMER1Q5JTC6 1135 aaPredicted RBP13.04□□□□□ -0.32
SYVN1-214ENST00000532771 IFNL2Q8IZJ0 200 aa13.04□□□□□ -0.32
SYVN1-214ENST00000532771 SMARCC1Q92922 1105 aaPredicted RBP13.04□□□□□ -0.32
SYVN1-214ENST00000532771 FHDC1Q9C0D6 1143 aaPredicted RBP13.04□□□□□ -0.32
SYVN1-214ENST00000532771 DCAF8L1A6NGE4 600 aa13.03□□□□□ -0.32
SYVN1-214ENST00000532771 HMGB2P26583 209 aaKnown RBP13.03□□□□□ -0.32
SYVN1-214ENST00000532771 PIGBQ92521 554 aa13.03□□□□□ -0.32
SYVN1-214ENST00000532771 ARXQ96QS3 562 aa13.03□□□□□ -0.32
SYVN1-214ENST00000532771 SYT17Q9BSW7 474 aa13.03□□□□□ -0.32
SYVN1-214ENST00000532771 ITGB4P16144 1822 aa13.03□□□□□ -0.32
SYVN1-214ENST00000532771 TUBGCP6Q96RT7 1819 aa13.03□□□□□ -0.32
SYVN1-214ENST00000532771 MAP3K5Q99683 1374 aa13.02□□□□□ -0.33
SYVN1-214ENST00000532771 PER1O15534 1290 aaPredicted RBP13.01□□□□□ -0.33
SYVN1-214ENST00000532771 TMOD3Q9NYL9 352 aa13.01□□□□□ -0.33
SYVN1-214ENST00000532771 C5P01031 1676 aa13.01□□□□□ -0.33
SYVN1-214ENST00000532771 COL24A1Q17RW2 1714 aa13.01□□□□□ -0.33
SYVN1-214ENST00000532771 POLD1P28340 1107 aa13□□□□□ -0.33
SYVN1-214ENST00000532771 PLEKHO1Q53GL0 409 aaPredicted RBP13□□□□□ -0.33
SYVN1-214ENST00000532771 COL23A1Q86Y22 540 aaPredicted RBP13□□□□□ -0.33
SYVN1-214ENST00000532771 IL13P35225 146 aa12.99□□□□□ -0.33
SYVN1-214ENST00000532771 AMOTQ4VCS5 1084 aa12.99□□□□□ -0.33
SYVN1-214ENST00000532771 AEBP1Q8IUX7 1158 aa12.99□□□□□ -0.33
SYVN1-214ENST00000532771 TAF1LQ8IZX4 1826 aa12.99□□□□□ -0.33
SYVN1-214ENST00000532771 KDRP35968 1356 aa12.98□□□□□ -0.33
SYVN1-214ENST00000532771 LOC102724428A0A0B4J2F2 783 aa12.98□□□□□ -0.33
SYVN1-214ENST00000532771 HSP90AB1P08238 724 aaKnown RBP12.98□□□□□ -0.33
SYVN1-214ENST00000532771 SIK1P57059 783 aa12.98□□□□□ -0.33
SYVN1-214ENST00000532771 FLAD1Q8NFF5 587 aa12.98□□□□□ -0.33
SYVN1-214ENST00000532771 ASAP1Q9ULH1 1129 aa12.98□□□□□ -0.33
SYVN1-214ENST00000532771 C4BP0C0L5 1744 aa12.97□□□□□ -0.33
SYVN1-214ENST00000532771 ERVV-2B6SEH9 535 aa12.97□□□□□ -0.33
SYVN1-214ENST00000532771 MSH5O43196 834 aa12.97□□□□□ -0.33
SYVN1-214ENST00000532771 YY1P25490 414 aa12.97□□□□□ -0.33
SYVN1-214ENST00000532771 MTHFSP49914 203 aa12.97□□□□□ -0.33
SYVN1-214ENST00000532771 SULT6B1Q6IMI4 303 aa12.97□□□□□ -0.33
SYVN1-214ENST00000532771 ZNF530Q6P9A1 599 aaPredicted RBP12.97□□□□□ -0.33
SYVN1-214ENST00000532771 DCAF5Q96JK2 942 aa12.97□□□□□ -0.33
SYVN1-214ENST00000532771 ATG3Q9NT62 314 aa12.97□□□□□ -0.33
SYVN1-214ENST00000532771 NPC1L1Q9UHC9 1359 aa12.96□□□□□ -0.33
SYVN1-214ENST00000532771 CC2D1BQ5T0F9 858 aaKnown RBP12.96□□□□□ -0.33
SYVN1-214ENST00000532771 AK7Q96M32 723 aa12.96□□□□□ -0.33
SYVN1-214ENST00000532771 KDM6AO15550 1401 aaPredicted RBP12.96□□□□□ -0.34
SYVN1-214ENST00000532771 ITPK1Q13572 414 aa12.95□□□□□ -0.34
SYVN1-214ENST00000532771 AMIGO3Q86WK7 504 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms