RNA–Protein interactions for RNA: ENST00000532632.1

TM9SF1-212, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 3

Gene TM9SF1, Length 505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-212ENST00000532632 HSP90AB2PQ58FF8 381 aa20.5■□□□□ 0.87
TM9SF1-212ENST00000532632 SYTL4Q96C24 671 aaPredicted RBP20.5■□□□□ 0.87
TM9SF1-212ENST00000532632 BTAF1O14981 1849 aa20.48■□□□□ 0.87
TM9SF1-212ENST00000532632 EMILIN1Q9Y6C2 1016 aa20.48■□□□□ 0.87
TM9SF1-212ENST00000532632 PPM1GO15355 546 aaPredicted RBP20.47■□□□□ 0.87
TM9SF1-212ENST00000532632 ZBTB7AO95365 584 aa20.47■□□□□ 0.87
TM9SF1-212ENST00000532632 HSPA5P11021 654 aaKnown RBP20.47■□□□□ 0.87
TM9SF1-212ENST00000532632 TATP17735 454 aaPredicted RBP20.47■□□□□ 0.87
TM9SF1-212ENST00000532632 RGPD2P0DJD1 1756 aa20.46■□□□□ 0.87
TM9SF1-212ENST00000532632 CASZ1Q86V15 1759 aa20.46■□□□□ 0.87
TM9SF1-212ENST00000532632 PDGFDQ9GZP0 370 aaPredicted RBP20.46■□□□□ 0.87
TM9SF1-212ENST00000532632 PRIM1P49642 420 aaKnown RBP20.45■□□□□ 0.86
TM9SF1-212ENST00000532632 SLC27A3Q5K4L6 730 aa20.43■□□□□ 0.86
TM9SF1-212ENST00000532632 DOT1LQ8TEK3 1739 aa20.42■□□□□ 0.86
TM9SF1-212ENST00000532632 ATF5Q9Y2D1 282 aaPredicted RBP20.42■□□□□ 0.86
TM9SF1-212ENST00000532632 PCDH11XQ9BZA7 1347 aa20.42■□□□□ 0.86
TM9SF1-212ENST00000532632 PCDH11YQ9BZA8 1340 aa20.42■□□□□ 0.86
TM9SF1-212ENST00000532632 PAPPAQ13219 1627 aa20.42■□□□□ 0.86
TM9SF1-212ENST00000532632 MTFR1LQ9H019 292 aa20.41■□□□□ 0.86
TM9SF1-212ENST00000532632 LRRC4BQ9NT99 713 aa20.41■□□□□ 0.86
TM9SF1-212ENST00000532632 SHANK3Q9BYB0 1731 aa20.41■□□□□ 0.86
TM9SF1-212ENST00000532632 ZNF827Q17R98 1081 aa20.4■□□□□ 0.86
TM9SF1-212ENST00000532632 NSD2O96028 1365 aa20.39■□□□□ 0.85
TM9SF1-212ENST00000532632 WASHC2AQ641Q2 1341 aa20.39■□□□□ 0.85
TM9SF1-212ENST00000532632 DCAF8L1A6NGE4 600 aa20.39■□□□□ 0.85
TM9SF1-212ENST00000532632 TNNT2P45379 298 aaPredicted RBP20.39■□□□□ 0.85
TM9SF1-212ENST00000532632 PTGER2P43116 358 aa20.38■□□□□ 0.85
TM9SF1-212ENST00000532632 PANK3Q9H999 370 aa20.38■□□□□ 0.85
TM9SF1-212ENST00000532632 ANKRD26Q9UPS8 1709 aa20.37■□□□□ 0.85
TM9SF1-212ENST00000532632 POLKQ9UBT6 870 aa20.37■□□□□ 0.85
TM9SF1-212ENST00000532632 CCNL1Q9UK58 526 aaPredicted RBP20.36■□□□□ 0.85
TM9SF1-212ENST00000532632 KCNQ4P56696 695 aa20.35■□□□□ 0.85
TM9SF1-212ENST00000532632 AKT1S1Q96B36 256 aa20.35■□□□□ 0.85
TM9SF1-212ENST00000532632 NCAPD2Q15021 1401 aa20.35■□□□□ 0.85
TM9SF1-212ENST00000532632 CYP27B1O15528 508 aa20.34■□□□□ 0.85
TM9SF1-212ENST00000532632 TFCP2L1Q9NZI6 479 aa20.34■□□□□ 0.85
TM9SF1-212ENST00000532632 SPG7Q9UQ90 795 aa20.34■□□□□ 0.85
TM9SF1-212ENST00000532632 EYA1Q99502 592 aa20.33■□□□□ 0.85
TM9SF1-212ENST00000532632 EIF4A2Q14240 407 aaKnown RBP20.31■□□□□ 0.84
TM9SF1-212ENST00000532632 MPRIPQ6WCQ1 1025 aa20.31■□□□□ 0.84
TM9SF1-212ENST00000532632 MAP2P11137 1827 aaKnown RBP20.31■□□□□ 0.84
TM9SF1-212ENST00000532632 MORC1Q86VD1 984 aa20.3■□□□□ 0.84
TM9SF1-212ENST00000532632 SLC16A10Q8TF71 515 aa20.3■□□□□ 0.84
TM9SF1-212ENST00000532632 ARXQ96QS3 562 aa20.3■□□□□ 0.84
TM9SF1-212ENST00000532632 SGIP1Q9BQI5 828 aa20.3■□□□□ 0.84
TM9SF1-212ENST00000532632 FHDC1Q9C0D6 1143 aaPredicted RBP20.3■□□□□ 0.84
TM9SF1-212ENST00000532632 KNSTRNQ9Y448 316 aa20.3■□□□□ 0.84
TM9SF1-212ENST00000532632 PALLDQ8WX93 1383 aa20.3■□□□□ 0.84
TM9SF1-212ENST00000532632 LY75O60449 1722 aa20.3■□□□□ 0.84
TM9SF1-212ENST00000532632 PKD1L3Q7Z443 1732 aa20.3■□□□□ 0.84
TM9SF1-212ENST00000532632 PNPLA7Q6ZV29 1317 aa20.29■□□□□ 0.84
TM9SF1-212ENST00000532632 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.29■□□□□ 0.84
TM9SF1-212ENST00000532632 HMGB2P26583 209 aaKnown RBP20.27■□□□□ 0.84
TM9SF1-212ENST00000532632 POLD1P28340 1107 aa20.27■□□□□ 0.84
TM9SF1-212ENST00000532632 SMARCC1Q92922 1105 aaPredicted RBP20.27■□□□□ 0.84
TM9SF1-212ENST00000532632 SYT17Q9BSW7 474 aa20.27■□□□□ 0.84
TM9SF1-212ENST00000532632 MSH5O43196 834 aa20.26■□□□□ 0.83
TM9SF1-212ENST00000532632 YY1P25490 414 aa20.26■□□□□ 0.83
TM9SF1-212ENST00000532632 NKX1-1Q15270 411 aaPredicted RBP20.26■□□□□ 0.83
TM9SF1-212ENST00000532632 QSER1Q2KHR3 1735 aa20.25■□□□□ 0.83
TM9SF1-212ENST00000532632 IFNL2Q8IZJ0 200 aa20.25■□□□□ 0.83
TM9SF1-212ENST00000532632 IGSF1Q8N6C5 1336 aa20.25■□□□□ 0.83
TM9SF1-212ENST00000532632 TOGARAM1Q9Y4F4 1720 aa20.24■□□□□ 0.83
TM9SF1-212ENST00000532632 KLHL34Q8N239 644 aa20.24■□□□□ 0.83
TM9SF1-212ENST00000532632 PIGBQ92521 554 aa20.24■□□□□ 0.83
TM9SF1-212ENST00000532632 TMOD3Q9NYL9 352 aa20.24■□□□□ 0.83
TM9SF1-212ENST00000532632 KIF7Q2M1P5 1343 aa20.24■□□□□ 0.83
TM9SF1-212ENST00000532632 PLEKHG2Q9H7P9 1386 aa20.23■□□□□ 0.83
TM9SF1-212ENST00000532632 PHKG2P15735 406 aa20.23■□□□□ 0.83
TM9SF1-212ENST00000532632 MAP3K5Q99683 1374 aa20.22■□□□□ 0.83
TM9SF1-212ENST00000532632 TUBGCP6Q96RT7 1819 aa20.22■□□□□ 0.83
TM9SF1-212ENST00000532632 C5P01031 1676 aa20.2■□□□□ 0.82
TM9SF1-212ENST00000532632 COL23A1Q86Y22 540 aaPredicted RBP20.2■□□□□ 0.82
TM9SF1-212ENST00000532632 AK7Q96M32 723 aa20.2■□□□□ 0.82
TM9SF1-212ENST00000532632 ITGB4P16144 1822 aa20.19■□□□□ 0.82
TM9SF1-212ENST00000532632 PLEKHO1Q53GL0 409 aaPredicted RBP20.19■□□□□ 0.82
TM9SF1-212ENST00000532632 AMER1Q5JTC6 1135 aaPredicted RBP20.19■□□□□ 0.82
TM9SF1-212ENST00000532632 FLAD1Q8NFF5 587 aa20.19■□□□□ 0.82
TM9SF1-212ENST00000532632 HSP90AB1P08238 724 aaKnown RBP20.18■□□□□ 0.82
TM9SF1-212ENST00000532632 LOC102724428A0A0B4J2F2 783 aa20.17■□□□□ 0.82
TM9SF1-212ENST00000532632 SIK1P57059 783 aa20.17■□□□□ 0.82
TM9SF1-212ENST00000532632 MSL1Q68DK7 614 aa20.17■□□□□ 0.82
TM9SF1-212ENST00000532632 ZNF530Q6P9A1 599 aaPredicted RBP20.17■□□□□ 0.82
TM9SF1-212ENST00000532632 UTRNP46939 3433 aa20.16■□□□□ 0.82
TM9SF1-212ENST00000532632 AMOTQ4VCS5 1084 aa20.16■□□□□ 0.82
TM9SF1-212ENST00000532632 AEBP1Q8IUX7 1158 aa20.16■□□□□ 0.82
TM9SF1-212ENST00000532632 ASAP1Q9ULH1 1129 aa20.16■□□□□ 0.82
TM9SF1-212ENST00000532632 DCAF5Q96JK2 942 aa20.15■□□□□ 0.82
TM9SF1-212ENST00000532632 C4BP0C0L5 1744 aa20.14■□□□□ 0.81
TM9SF1-212ENST00000532632 C1orf141Q5JVX7 400 aa20.14■□□□□ 0.81
TM9SF1-212ENST00000532632 SULT6B1Q6IMI4 303 aa20.14■□□□□ 0.81
TM9SF1-212ENST00000532632 ERVV-2B6SEH9 535 aa20.13■□□□□ 0.81
TM9SF1-212ENST00000532632 PHF14O94880 888 aa20.13■□□□□ 0.81
TM9SF1-212ENST00000532632 GPR162Q16538 588 aa20.13■□□□□ 0.81
TM9SF1-212ENST00000532632 TAF1LQ8IZX4 1826 aa20.13■□□□□ 0.81
TM9SF1-212ENST00000532632 ATP6V1AP38606 617 aa20.12■□□□□ 0.81
TM9SF1-212ENST00000532632 CC2D1BQ5T0F9 858 aaKnown RBP20.12■□□□□ 0.81
TM9SF1-212ENST00000532632 PELP1Q8IZL8 1130 aaKnown RBP20.12■□□□□ 0.81
TM9SF1-212ENST00000532632 LINC00116Q8NCU8 138 aa20.12■□□□□ 0.81
TM9SF1-212ENST00000532632 ATG3Q9NT62 314 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms