RNA–Protein interactions for RNA: ENST00000532538.1

BRPF3-210, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 4

Gene BRPF3, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-210ENST00000532538 LRRC4BQ9NT99 713 aa21.2■□□□□ 0.98
BRPF3-210ENST00000532538 TFCP2L1Q9NZI6 479 aa21.2■□□□□ 0.98
BRPF3-210ENST00000532538 TRIM26Q12899 539 aaPredicted RBP21.19■□□□□ 0.98
BRPF3-210ENST00000532538 CDCA8Q53HL2 280 aa21.19■□□□□ 0.98
BRPF3-210ENST00000532538 USHBP1Q8N6Y0 703 aa21.19■□□□□ 0.98
BRPF3-210ENST00000532538 RAPGEF4Q8WZA2 1011 aa21.19■□□□□ 0.98
BRPF3-210ENST00000532538 SHANK3Q9BYB0 1731 aa21.18■□□□□ 0.98
BRPF3-210ENST00000532538 MSH5O43196 834 aa21.18■□□□□ 0.98
BRPF3-210ENST00000532538 POLD1P28340 1107 aa21.18■□□□□ 0.98
BRPF3-210ENST00000532538 KCNQ4P56696 695 aa21.18■□□□□ 0.98
BRPF3-210ENST00000532538 QSER1Q2KHR3 1735 aa21.18■□□□□ 0.98
BRPF3-210ENST00000532538 TUBGCP6Q96RT7 1819 aa21.18■□□□□ 0.98
BRPF3-210ENST00000532538 FYB1O15117 783 aa21.17■□□□□ 0.98
BRPF3-210ENST00000532538 RTL1A6NKG5 1358 aa21.17■□□□□ 0.98
BRPF3-210ENST00000532538 LY75O60449 1722 aa21.16■□□□□ 0.98
BRPF3-210ENST00000532538 TATP17735 454 aaPredicted RBP21.16■□□□□ 0.98
BRPF3-210ENST00000532538 MEGF6O75095 1541 aa21.15■□□□□ 0.98
BRPF3-210ENST00000532538 NBPF6Q5VWK0 638 aa21.15■□□□□ 0.98
BRPF3-210ENST00000532538 PELP1Q8IZL8 1130 aaKnown RBP21.15■□□□□ 0.98
BRPF3-210ENST00000532538 NBPF4Q96M43 638 aa21.15■□□□□ 0.98
BRPF3-210ENST00000532538 CCNL1Q9UK58 526 aaPredicted RBP21.15■□□□□ 0.98
BRPF3-210ENST00000532538 GPR162Q16538 588 aa21.14■□□□□ 0.97
BRPF3-210ENST00000532538 SLC16A10Q8TF71 515 aa21.14■□□□□ 0.97
BRPF3-210ENST00000532538 AKT1S1Q96B36 256 aa21.14■□□□□ 0.97
BRPF3-210ENST00000532538 SGIP1Q9BQI5 828 aa21.14■□□□□ 0.97
BRPF3-210ENST00000532538 PPM1GO15355 546 aaPredicted RBP21.12■□□□□ 0.97
BRPF3-210ENST00000532538 POLR3GLQ9BT43 218 aa21.12■□□□□ 0.97
BRPF3-210ENST00000532538 CGNL1Q0VF96 1302 aa21.11■□□□□ 0.97
BRPF3-210ENST00000532538 PNPLA7Q6ZV29 1317 aa21.11■□□□□ 0.97
BRPF3-210ENST00000532538 MAP2P11137 1827 aaKnown RBP21.11■□□□□ 0.97
BRPF3-210ENST00000532538 HSP90AB2PQ58FF8 381 aa21.1■□□□□ 0.97
BRPF3-210ENST00000532538 FLT4P35916 1363 aa21.1■□□□□ 0.97
BRPF3-210ENST00000532538 PCDH11XQ9BZA7 1347 aa21.08■□□□□ 0.97
BRPF3-210ENST00000532538 PCDH11YQ9BZA8 1340 aa21.08■□□□□ 0.97
BRPF3-210ENST00000532538 ITGB4P16144 1822 aa21.08■□□□□ 0.96
BRPF3-210ENST00000532538 INSRP06213 1382 aa21.08■□□□□ 0.96
BRPF3-210ENST00000532538 MPRIPQ6WCQ1 1025 aa21.07■□□□□ 0.96
BRPF3-210ENST00000532538 ZNF784Q8NCA9 323 aaPredicted RBP21.07■□□□□ 0.96
BRPF3-210ENST00000532538 C5P01031 1676 aa21.07■□□□□ 0.96
BRPF3-210ENST00000532538 NSD2O96028 1365 aa21.07■□□□□ 0.96
BRPF3-210ENST00000532538 NSD3Q9BZ95 1437 aa21.06■□□□□ 0.96
BRPF3-210ENST00000532538 PCGF6Q9BYE7 350 aa21.05■□□□□ 0.96
BRPF3-210ENST00000532538 EMILIN1Q9Y6C2 1016 aa21.05■□□□□ 0.96
BRPF3-210ENST00000532538 MAP3K5Q99683 1374 aa21.05■□□□□ 0.96
BRPF3-210ENST00000532538 TAF1LQ8IZX4 1826 aa21.04■□□□□ 0.96
BRPF3-210ENST00000532538 HMGB2P26583 209 aaKnown RBP21.04■□□□□ 0.96
BRPF3-210ENST00000532538 MSL1Q68DK7 614 aa21.03■□□□□ 0.96
BRPF3-210ENST00000532538 COL24A1Q17RW2 1714 aa21.03■□□□□ 0.96
BRPF3-210ENST00000532538 KIF24Q5T7B8 1368 aa21.02■□□□□ 0.96
BRPF3-210ENST00000532538 CARD14Q9BXL6 1004 aa21.02■□□□□ 0.96
BRPF3-210ENST00000532538 COL23A1Q86Y22 540 aaPredicted RBP21.01■□□□□ 0.95
BRPF3-210ENST00000532538 PALLDQ8WX93 1383 aa21■□□□□ 0.95
BRPF3-210ENST00000532538 SPG7Q9UQ90 795 aa21■□□□□ 0.95
BRPF3-210ENST00000532538 PKD1L3Q7Z443 1732 aa20.99■□□□□ 0.95
BRPF3-210ENST00000532538 NLGN2Q8NFZ4 835 aa20.99■□□□□ 0.95
BRPF3-210ENST00000532538 SMARCC1Q92922 1105 aaPredicted RBP20.99■□□□□ 0.95
BRPF3-210ENST00000532538 TOGARAM1Q9Y4F4 1720 aa20.98■□□□□ 0.95
BRPF3-210ENST00000532538 CYP27B1O15528 508 aa20.98■□□□□ 0.95
BRPF3-210ENST00000532538 TNNT2P45379 298 aaPredicted RBP20.98■□□□□ 0.95
BRPF3-210ENST00000532538 AK7Q96M32 723 aa20.98■□□□□ 0.95
BRPF3-210ENST00000532538 FLAD1Q8NFF5 587 aa20.97■□□□□ 0.95
BRPF3-210ENST00000532538 TIMELESSQ9UNS1 1208 aa20.96■□□□□ 0.95
BRPF3-210ENST00000532538 C4BP0C0L5 1744 aa20.95■□□□□ 0.94
BRPF3-210ENST00000532538 PHF14O94880 888 aa20.95■□□□□ 0.94
BRPF3-210ENST00000532538 ANKRD26Q9UPS8 1709 aa20.95■□□□□ 0.94
BRPF3-210ENST00000532538 TMOD3Q9NYL9 352 aa20.94■□□□□ 0.94
BRPF3-210ENST00000532538 EYA1Q99502 592 aa20.93■□□□□ 0.94
BRPF3-210ENST00000532538 WASHC2AQ641Q2 1341 aa20.93■□□□□ 0.94
BRPF3-210ENST00000532538 GRIN3BO60391 1043 aa20.92■□□□□ 0.94
BRPF3-210ENST00000532538 PIGBQ92521 554 aa20.92■□□□□ 0.94
BRPF3-210ENST00000532538 UBR3Q6ZT12 1888 aa20.92■□□□□ 0.94
BRPF3-210ENST00000532538 SENP3-EIF4A1A0A087X0R7 540 aa20.91■□□□□ 0.94
BRPF3-210ENST00000532538 IFNL2Q8IZJ0 200 aa20.9■□□□□ 0.94
BRPF3-210ENST00000532538 POLKQ9UBT6 870 aa20.9■□□□□ 0.94
BRPF3-210ENST00000532538 GIGYF1O75420 1035 aaPredicted RBP20.89■□□□□ 0.93
BRPF3-210ENST00000532538 YBX3P16989 372 aaKnown RBP eCLIP20.88■□□□□ 0.93
BRPF3-210ENST00000532538 C1QTNF8P60827 252 aa20.88■□□□□ 0.93
BRPF3-210ENST00000532538 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.87■□□□□ 0.93
BRPF3-210ENST00000532538 LOC102724428A0A0B4J2F2 783 aa20.87■□□□□ 0.93
BRPF3-210ENST00000532538 ATP6V1AP38606 617 aa20.87■□□□□ 0.93
BRPF3-210ENST00000532538 SIK1P57059 783 aa20.87■□□□□ 0.93
BRPF3-210ENST00000532538 EIF4G2P78344 907 aaKnown RBP eCLIP20.87■□□□□ 0.93
BRPF3-210ENST00000532538 NKX1-1Q15270 411 aaPredicted RBP20.87■□□□□ 0.93
BRPF3-210ENST00000532538 CLSPNQ9HAW4 1339 aa20.86■□□□□ 0.93
BRPF3-210ENST00000532538 PHKG2P15735 406 aa20.86■□□□□ 0.93
BRPF3-210ENST00000532538 EIF4A2Q14240 407 aaKnown RBP20.86■□□□□ 0.93
BRPF3-210ENST00000532538 SMIM5Q71RC9 77 aa20.86■□□□□ 0.93
BRPF3-210ENST00000532538 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.86■□□□□ 0.93
BRPF3-210ENST00000532538 CD2APQ9Y5K6 639 aa20.86■□□□□ 0.93
BRPF3-210ENST00000532538 GNPATO15228 680 aa20.85■□□□□ 0.93
BRPF3-210ENST00000532538 WWC3Q9ULE0 1092 aa20.85■□□□□ 0.93
BRPF3-210ENST00000532538 ASAP1Q9ULH1 1129 aa20.85■□□□□ 0.93
BRPF3-210ENST00000532538 NCAPD2Q15021 1401 aa20.85■□□□□ 0.93
BRPF3-210ENST00000532538 LINC00116Q8NCU8 138 aa20.84■□□□□ 0.93
BRPF3-210ENST00000532538 PANK3Q9H999 370 aa20.84■□□□□ 0.93
BRPF3-210ENST00000532538 UTRNP46939 3433 aa20.83■□□□□ 0.93
BRPF3-210ENST00000532538 HSPA5P11021 654 aaKnown RBP20.83■□□□□ 0.93
BRPF3-210ENST00000532538 SSFA2P28290 1259 aa20.83■□□□□ 0.93
BRPF3-210ENST00000532538 RBM42Q9BTD8 480 aaKnown RBP20.83■□□□□ 0.93
BRPF3-210ENST00000532538 CCER1Q8TC90 406 aaPredicted RBP20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms