RNA–Protein interactions for RNA: ENST00000532471.1

ME3-210, Transcript of malic enzyme 3, humanhuman

TSL 2

Gene ME3, Length 384 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-210ENST00000532471 EYA1Q99502 592 aa31.36■■■□□ 2.61
ME3-210ENST00000532471 EIF4A2Q14240 407 aaKnown RBP31.34■■■□□ 2.61
ME3-210ENST00000532471 MEGF6O75095 1541 aa31.34■■■□□ 2.61
ME3-210ENST00000532471 CC2D1BQ5T0F9 858 aaKnown RBP31.33■■■□□ 2.61
ME3-210ENST00000532471 PSDA5PKW4 1024 aaPredicted RBP31.32■■■□□ 2.6
ME3-210ENST00000532471 R3HDM1Q15032 1099 aaKnown RBP31.3■■■□□ 2.6
ME3-210ENST00000532471 SPG7Q9UQ90 795 aa31.3■■■□□ 2.6
ME3-210ENST00000532471 SYTL4Q96C24 671 aaPredicted RBP31.29■■■□□ 2.6
ME3-210ENST00000532471 KAT6BQ8WYB5 2073 aa31.29■■■□□ 2.6
ME3-210ENST00000532471 PCDH11XQ9BZA7 1347 aa31.28■■■□□ 2.6
ME3-210ENST00000532471 PCDH11YQ9BZA8 1340 aa31.28■■■□□ 2.6
ME3-210ENST00000532471 PRIM1P49642 420 aaKnown RBP31.26■■■□□ 2.59
ME3-210ENST00000532471 NPC1L1Q9UHC9 1359 aa31.26■■■□□ 2.59
ME3-210ENST00000532471 CNGB1Q14028 1251 aaPredicted RBP31.25■■■□□ 2.59
ME3-210ENST00000532471 TXNRD1Q16881 649 aa31.25■■■□□ 2.59
ME3-210ENST00000532471 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.25■■■□□ 2.59
ME3-210ENST00000532471 MTHFSP49914 203 aa31.24■■■□□ 2.59
ME3-210ENST00000532471 PROM2Q8N271 834 aa31.23■■■□□ 2.59
ME3-210ENST00000532471 NCAPD2Q15021 1401 aa31.23■■■□□ 2.59
ME3-210ENST00000532471 NHSQ6T4R5 1651 aa31.22■■■□□ 2.59
ME3-210ENST00000532471 IGSF1Q8N6C5 1336 aa31.22■■■□□ 2.59
ME3-210ENST00000532471 RGPD3A6NKT7 1758 aaPredicted RBP31.2■■■□□ 2.58
ME3-210ENST00000532471 RGPD4Q7Z3J3 1758 aa31.2■■■□□ 2.58
ME3-210ENST00000532471 RREB1Q92766 1687 aa31.19■■■□□ 2.58
ME3-210ENST00000532471 CYP27B1O15528 508 aa31.19■■■□□ 2.58
ME3-210ENST00000532471 IL13P35225 146 aa31.16■■■□□ 2.58
ME3-210ENST00000532471 PLEKHO1Q53GL0 409 aaPredicted RBP31.16■■■□□ 2.58
ME3-210ENST00000532471 IFNL2Q8IZJ0 200 aa31.16■■■□□ 2.58
ME3-210ENST00000532471 STK32BQ9NY57 414 aa31.15■■■□□ 2.58
ME3-210ENST00000532471 NKX1-1Q15270 411 aaPredicted RBP31.14■■■□□ 2.58
ME3-210ENST00000532471 NUP188Q5SRE5 1749 aa31.14■■■□□ 2.58
ME3-210ENST00000532471 PLEKHG2Q9H7P9 1386 aa31.14■■■□□ 2.58
ME3-210ENST00000532471 AMOTQ4VCS5 1084 aa31.13■■■□□ 2.57
ME3-210ENST00000532471 SLC27A3Q5K4L6 730 aa31.13■■■□□ 2.57
ME3-210ENST00000532471 SULT6B1Q6IMI4 303 aa31.13■■■□□ 2.57
ME3-210ENST00000532471 SHANK3Q9BYB0 1731 aa31.12■■■□□ 2.57
ME3-210ENST00000532471 DIAPH1O60610 1272 aaKnown RBP31.12■■■□□ 2.57
ME3-210ENST00000532471 BTAF1O14981 1849 aa31.11■■■□□ 2.57
ME3-210ENST00000532471 MPRIPQ6WCQ1 1025 aa31.11■■■□□ 2.57
ME3-210ENST00000532471 PHKG2P15735 406 aa31.09■■■□□ 2.57
ME3-210ENST00000532471 ZEB1P37275 1124 aaPredicted RBP31.09■■■□□ 2.57
ME3-210ENST00000532471 HSP90AB1P08238 724 aaKnown RBP31.08■■■□□ 2.57
ME3-210ENST00000532471 HMGB2P26583 209 aaKnown RBP31.08■■■□□ 2.57
ME3-210ENST00000532471 SLC15A2Q16348 729 aa31.08■■■□□ 2.57
ME3-210ENST00000532471 ANO8Q9HCE9 1232 aaPredicted RBP31.08■■■□□ 2.57
ME3-210ENST00000532471 AEBP1Q8IUX7 1158 aa31.07■■■□□ 2.56
ME3-210ENST00000532471 PKD1L3Q7Z443 1732 aa31.07■■■□□ 2.56
ME3-210ENST00000532471 DOT1LQ8TEK3 1739 aa31.07■■■□□ 2.56
ME3-210ENST00000532471 CFAP53Q96M91 514 aa31.06■■■□□ 2.56
ME3-210ENST00000532471 SRCAPQ6ZRS2 3230 aa31.05■■■□□ 2.56
ME3-210ENST00000532471 C1orf141Q5JVX7 400 aa31.04■■■□□ 2.56
ME3-210ENST00000532471 ZNF530Q6P9A1 599 aaPredicted RBP31.04■■■□□ 2.56
ME3-210ENST00000532471 SMARCC1Q92922 1105 aaPredicted RBP31.04■■■□□ 2.56
ME3-210ENST00000532471 LRRC4BQ9NT99 713 aa31.04■■■□□ 2.56
ME3-210ENST00000532471 TMOD3Q9NYL9 352 aa31.03■■■□□ 2.56
ME3-210ENST00000532471 CCNL1Q9UK58 526 aaPredicted RBP31.02■■■□□ 2.56
ME3-210ENST00000532471 KDRP35968 1356 aa31.02■■■□□ 2.56
ME3-210ENST00000532471 DCAF5Q96JK2 942 aa31.01■■■□□ 2.55
ME3-210ENST00000532471 HMOX1P09601 288 aa31■■■□□ 2.55
ME3-210ENST00000532471 PIGBQ92521 554 aa31■■■□□ 2.55
ME3-210ENST00000532471 SPON1Q9HCB6 807 aa31■■■□□ 2.55
ME3-210ENST00000532471 ERVV-2B6SEH9 535 aa30.98■■■□□ 2.55
ME3-210ENST00000532471 U2SURPO15042 1029 aaKnown RBP30.98■■■□□ 2.55
ME3-210ENST00000532471 PPP2R1AP30153 589 aa30.97■■■□□ 2.55
ME3-210ENST00000532471 NUDCQ9Y266 331 aa30.97■■■□□ 2.55
ME3-210ENST00000532471 KCNQ4P56696 695 aa30.96■■■□□ 2.55
ME3-210ENST00000532471 PALLDQ8WX93 1383 aa30.94■■■□□ 2.54
ME3-210ENST00000532471 LRP5O75197 1615 aa30.94■■■□□ 2.54
ME3-210ENST00000532471 CABP4P57796 275 aa30.93■■■□□ 2.54
ME3-210ENST00000532471 AKT1S1Q96B36 256 aa30.93■■■□□ 2.54
ME3-210ENST00000532471 TFCP2L1Q9NZI6 479 aa30.93■■■□□ 2.54
ME3-210ENST00000532471 DDX10Q13206 875 aaKnown RBP30.92■■■□□ 2.54
ME3-210ENST00000532471 ZNF827Q17R98 1081 aa30.91■■■□□ 2.54
ME3-210ENST00000532471 AKAP4Q5JQC9 854 aa30.91■■■□□ 2.54
ME3-210ENST00000532471 PPP1R1BQ9UD71 204 aaPredicted RBP30.9■■■□□ 2.54
ME3-210ENST00000532471 ITGB4P16144 1822 aa30.89■■■□□ 2.54
ME3-210ENST00000532471 PDGFDQ9GZP0 370 aaPredicted RBP30.89■■■□□ 2.54
ME3-210ENST00000532471 LY75O60449 1722 aa30.88■■■□□ 2.53
ME3-210ENST00000532471 ZBTB7AO95365 584 aa30.88■■■□□ 2.53
ME3-210ENST00000532471 ASAP1Q9ULH1 1129 aa30.88■■■□□ 2.53
ME3-210ENST00000532471 TOGARAM1Q9Y4F4 1720 aa30.87■■■□□ 2.53
ME3-210ENST00000532471 MTFR1LQ9H019 292 aa30.86■■■□□ 2.53
ME3-210ENST00000532471 ATG3Q9NT62 314 aa30.86■■■□□ 2.53
ME3-210ENST00000532471 COL3A1P02461 1466 aaPredicted RBP30.86■■■□□ 2.53
ME3-210ENST00000532471 LOC102724428A0A0B4J2F2 783 aa30.85■■■□□ 2.53
ME3-210ENST00000532471 SIK1P57059 783 aa30.85■■■□□ 2.53
ME3-210ENST00000532471 MTHFSDQ2M296 383 aaKnown RBP30.85■■■□□ 2.53
ME3-210ENST00000532471 ATF5Q9Y2D1 282 aaPredicted RBP30.85■■■□□ 2.53
ME3-210ENST00000532471 PAPPAQ13219 1627 aa30.84■■■□□ 2.53
ME3-210ENST00000532471 SLC16A10Q8TF71 515 aa30.84■■■□□ 2.53
ME3-210ENST00000532471 U2AF1L5P0DN76 240 aaPredicted RBP30.83■■■□□ 2.53
ME3-210ENST00000532471 U2AF1Q01081 240 aaKnown RBP eCLIP30.83■■■□□ 2.53
ME3-210ENST00000532471 NFATC2IPQ8NCF5 419 aa30.83■■■□□ 2.53
ME3-210ENST00000532471 RALBP1Q15311 655 aa30.82■■■□□ 2.52
ME3-210ENST00000532471 ATP6V1AP38606 617 aa30.81■■■□□ 2.52
ME3-210ENST00000532471 GAS2L2Q8NHY3 880 aa30.81■■■□□ 2.52
ME3-210ENST00000532471 KDM6AO15550 1401 aaPredicted RBP30.81■■■□□ 2.52
ME3-210ENST00000532471 MSH5O43196 834 aa30.8■■■□□ 2.52
ME3-210ENST00000532471 FLAD1Q8NFF5 587 aa30.8■■■□□ 2.52
ME3-210ENST00000532471 RBM42Q9BTD8 480 aaKnown RBP30.8■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms