RNA–Protein interactions for RNA: ENST00000532297.5

NXF1-213, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NXF1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-213ENST00000532297 PTCH1Q13635 1447 aa18.34■□□□□ 0.53
NXF1-213ENST00000532297 GNAI1P63096 354 aa18.34■□□□□ 0.53
NXF1-213ENST00000532297 MCTP1Q6DN14 999 aa18.34■□□□□ 0.53
NXF1-213ENST00000532297 CAVIN1Q6NZI2 390 aaKnown RBP18.34■□□□□ 0.53
NXF1-213ENST00000532297 COG3Q96JB2 828 aa18.34■□□□□ 0.53
NXF1-213ENST00000532297 ZNF853P0CG23 659 aa18.33■□□□□ 0.53
NXF1-213ENST00000532297 GSPT1P15170 499 aaKnown RBP18.33■□□□□ 0.53
NXF1-213ENST00000532297 ZNF445P59923 1031 aa18.33■□□□□ 0.53
NXF1-213ENST00000532297 IFT57Q9NWB7 429 aa18.33■□□□□ 0.53
NXF1-213ENST00000532297 CPSF1Q10570 1443 aaKnown RBP18.33■□□□□ 0.52
NXF1-213ENST00000532297 ABCC4O15439 1325 aa18.33■□□□□ 0.52
NXF1-213ENST00000532297 SMARCA5O60264 1052 aaPredicted RBP18.33■□□□□ 0.52
NXF1-213ENST00000532297 XPCQ01831 940 aaPredicted RBP18.33■□□□□ 0.52
NXF1-213ENST00000532297 HS1BP3Q53T59 392 aa18.33■□□□□ 0.52
NXF1-213ENST00000532297 NOL7Q9UMY1 257 aaKnown RBP18.33■□□□□ 0.52
NXF1-213ENST00000532297 SULT6B1Q6IMI4 303 aa18.32■□□□□ 0.52
NXF1-213ENST00000532297 PRDM4Q9UKN5 801 aa18.32■□□□□ 0.52
NXF1-213ENST00000532297 EDC4Q6P2E9 1401 aaKnown RBP18.32■□□□□ 0.52
NXF1-213ENST00000532297 ZSCAN23Q3MJ62 389 aa18.32■□□□□ 0.52
NXF1-213ENST00000532297 UQCRHLA0A096LP55 91 aa18.31■□□□□ 0.52
NXF1-213ENST00000532297 UQCRHP07919 91 aa18.31■□□□□ 0.52
NXF1-213ENST00000532297 BRPF1P55201 1214 aaPredicted RBP18.31■□□□□ 0.52
NXF1-213ENST00000532297 ZNF500O60304 480 aaPredicted RBP18.31■□□□□ 0.52
NXF1-213ENST00000532297 CHMP4BQ9H444 224 aaKnown RBP18.31■□□□□ 0.52
NXF1-213ENST00000532297 CDK12Q9NYV4 1490 aaPredicted RBP18.31■□□□□ 0.52
NXF1-213ENST00000532297 RBSNQ9H1K0 784 aa18.3■□□□□ 0.52
NXF1-213ENST00000532297 RIMS1Q86UR5 1692 aaKnown RBP18.3■□□□□ 0.52
NXF1-213ENST00000532297 FOXO3O43524 673 aa18.3■□□□□ 0.52
NXF1-213ENST00000532297 EIF4A2Q14240 407 aaKnown RBP18.3■□□□□ 0.52
NXF1-213ENST00000532297 CFAP44Q96MT7 982 aa18.3■□□□□ 0.52
NXF1-213ENST00000532297 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.3■□□□□ 0.52
NXF1-213ENST00000532297 GCC1Q96CN9 775 aa18.29■□□□□ 0.52
NXF1-213ENST00000532297 HSP90AB2PQ58FF8 381 aa18.29■□□□□ 0.52
NXF1-213ENST00000532297 ARHGAP45Q92619 1136 aa18.29■□□□□ 0.52
NXF1-213ENST00000532297 DLC1Q96QB1 1528 aa18.28■□□□□ 0.52
NXF1-213ENST00000532297 PDLIM2Q96JY6 352 aa18.28■□□□□ 0.52
NXF1-213ENST00000532297 PIK3R4Q99570 1358 aa18.28■□□□□ 0.52
NXF1-213ENST00000532297 ARID3AQ99856 593 aa18.28■□□□□ 0.52
NXF1-213ENST00000532297 MSH6P52701 1360 aa18.27■□□□□ 0.52
NXF1-213ENST00000532297 LMBRD1Q9NUN5 540 aa18.27■□□□□ 0.52
NXF1-213ENST00000532297 PRIM1P49642 420 aaKnown RBP18.27■□□□□ 0.51
NXF1-213ENST00000532297 MON2Q7Z3U7 1717 aa18.26■□□□□ 0.51
NXF1-213ENST00000532297 NUCB2P80303 420 aa18.26■□□□□ 0.51
NXF1-213ENST00000532297 CCDC61Q9Y6R9 512 aa18.26■□□□□ 0.51
NXF1-213ENST00000532297 SPATA31D1Q6ZQQ2 1576 aa18.26■□□□□ 0.51
NXF1-213ENST00000532297 ROBO2Q9HCK4 1378 aa18.26■□□□□ 0.51
NXF1-213ENST00000532297 DIP2BQ9P265 1576 aa18.26■□□□□ 0.51
NXF1-213ENST00000532297 PLEKHM2Q8IWE5 1019 aa18.25■□□□□ 0.51
NXF1-213ENST00000532297 MEIS3Q99687 375 aa18.25■□□□□ 0.51
NXF1-213ENST00000532297 ZKSCAN5Q9Y2L8 839 aa18.25■□□□□ 0.51
NXF1-213ENST00000532297 ITSN1Q15811 1721 aa18.25■□□□□ 0.51
NXF1-213ENST00000532297 C3P01024 1663 aa18.25■□□□□ 0.51
NXF1-213ENST00000532297 F6X3S4 739 aa18.25■□□□□ 0.51
NXF1-213ENST00000532297 CSPP1Q1MSJ5 1256 aa18.25■□□□□ 0.51
NXF1-213ENST00000532297 TSHZ3Q63HK5 1081 aa18.25■□□□□ 0.51
NXF1-213ENST00000532297 CDC45O75419 566 aa18.24■□□□□ 0.51
NXF1-213ENST00000532297 PKP1Q13835 747 aa18.24■□□□□ 0.51
NXF1-213ENST00000532297 RGS12O14924 1447 aa18.24■□□□□ 0.51
NXF1-213ENST00000532297 NECTIN2Q92692 538 aa18.24■□□□□ 0.51
NXF1-213ENST00000532297 PEAK1Q9H792 1746 aa18.23■□□□□ 0.51
NXF1-213ENST00000532297 DYNC1I1O14576 645 aa18.23■□□□□ 0.51
NXF1-213ENST00000532297 PRPF40AO75400 957 aaKnown RBP18.23■□□□□ 0.51
NXF1-213ENST00000532297 RBM27Q9P2N5 1060 aaKnown RBP18.23■□□□□ 0.51
NXF1-213ENST00000532297 LMOD3Q0VAK6 560 aa18.23■□□□□ 0.51
NXF1-213ENST00000532297 RABEP1Q15276 862 aa18.23■□□□□ 0.51
NXF1-213ENST00000532297 G2E3Q7L622 706 aa18.23■□□□□ 0.51
NXF1-213ENST00000532297 MTERF4Q7Z6M4 381 aaKnown RBP18.23■□□□□ 0.51
NXF1-213ENST00000532297 AKAP12Q02952 1782 aa18.22■□□□□ 0.51
NXF1-213ENST00000532297 ACEP12821 1306 aa18.22■□□□□ 0.51
NXF1-213ENST00000532297 CHAMP1Q96JM3 812 aa18.22■□□□□ 0.51
NXF1-213ENST00000532297 ATP10DQ9P241 1426 aa18.22■□□□□ 0.51
NXF1-213ENST00000532297 CYP2E1P05181 493 aaPredicted RBP18.22■□□□□ 0.51
NXF1-213ENST00000532297 SLC4A10Q6U841 1118 aa18.22■□□□□ 0.51
NXF1-213ENST00000532297 SLC26A8Q96RN1 970 aa18.22■□□□□ 0.51
NXF1-213ENST00000532297 API5Q9BZZ5 524 aaKnown RBP18.22■□□□□ 0.51
NXF1-213ENST00000532297 GPT2Q8TD30 523 aa18.21■□□□□ 0.51
NXF1-213ENST00000532297 PODXL2Q9NZ53 605 aa18.21■□□□□ 0.51
NXF1-213ENST00000532297 AATKQ6ZMQ8 1374 aa18.2■□□□□ 0.5
NXF1-213ENST00000532297 MCM5P33992 734 aa18.2■□□□□ 0.5
NXF1-213ENST00000532297 TTC21BQ7Z4L5 1316 aa18.2■□□□□ 0.5
NXF1-213ENST00000532297 SMAP1Q8IYB5 467 aaPredicted RBP18.2■□□□□ 0.5
NXF1-213ENST00000532297 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.2■□□□□ 0.5
NXF1-213ENST00000532297 SASS6Q6UVJ0 657 aa18.19■□□□□ 0.5
NXF1-213ENST00000532297 CCDC39Q9UFE4 941 aa18.19■□□□□ 0.5
NXF1-213ENST00000532297 NUTM2GQ5VZR2 741 aa18.19■□□□□ 0.5
NXF1-213ENST00000532297 CEP85Q6P2H3 762 aa18.19■□□□□ 0.5
NXF1-213ENST00000532297 ESF1Q9H501 851 aaKnown RBP18.19■□□□□ 0.5
NXF1-213ENST00000532297 TTC22Q5TAA0 569 aa18.19■□□□□ 0.5
NXF1-213ENST00000532297 SYCE3A1L190 88 aa18.18■□□□□ 0.5
NXF1-213ENST00000532297 CEBPAP49715 358 aaPredicted RBP18.18■□□□□ 0.5
NXF1-213ENST00000532297 DCTPP1Q9H773 170 aa18.18■□□□□ 0.5
NXF1-213ENST00000532297 SLC4A2P04920 1241 aa18.18■□□□□ 0.5
NXF1-213ENST00000532297 LRSAM1Q6UWE0 723 aa18.18■□□□□ 0.5
NXF1-213ENST00000532297 MAP3K19Q56UN5 1328 aa18.17■□□□□ 0.5
NXF1-213ENST00000532297 SDSP20132 328 aa18.17■□□□□ 0.5
NXF1-213ENST00000532297 LTKP29376 864 aa18.17■□□□□ 0.5
NXF1-213ENST00000532297 CWC22Q9HCG8 908 aaKnown RBP18.17■□□□□ 0.5
NXF1-213ENST00000532297 TMEM63CQ9P1W3 806 aa18.17■□□□□ 0.5
NXF1-213ENST00000532297 ZGPATQ8N5A5 531 aaKnown RBP18.16■□□□□ 0.5
NXF1-213ENST00000532297 PRDM10Q9NQV6 1147 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms