RNA–Protein interactions for RNA: ENST00000532259.1

SRPRA-206, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2 BASIC

Gene SRPRA, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-206ENST00000532259 ATF3P18847 181 aa19.36■□□□□ 0.69
SRPRA-206ENST00000532259 RTF1Q92541 710 aaKnown RBP19.36■□□□□ 0.69
SRPRA-206ENST00000532259 DDX19BQ9UMR2 479 aa19.35■□□□□ 0.69
SRPRA-206ENST00000532259 KIF24Q5T7B8 1368 aa19.35■□□□□ 0.69
SRPRA-206ENST00000532259 AXIN2Q9Y2T1 843 aa19.34■□□□□ 0.69
SRPRA-206ENST00000532259 KCNH5Q8NCM2 988 aa19.34■□□□□ 0.69
SRPRA-206ENST00000532259 ZNF428Q96B54 188 aa19.34■□□□□ 0.69
SRPRA-206ENST00000532259 BRPF1P55201 1214 aaPredicted RBP19.33■□□□□ 0.69
SRPRA-206ENST00000532259 GAS2L2Q8NHY3 880 aa19.33■□□□□ 0.69
SRPRA-206ENST00000532259 MST1RQ04912 1400 aa19.33■□□□□ 0.69
SRPRA-206ENST00000532259 ERICH6Q7L0X2 663 aa19.33■□□□□ 0.68
SRPRA-206ENST00000532259 ARHGEF25Q86VW2 580 aa19.33■□□□□ 0.68
SRPRA-206ENST00000532259 RWDD1Q9H446 243 aaPredicted RBP19.33■□□□□ 0.68
SRPRA-206ENST00000532259 C1orf115Q9H7X2 142 aa19.33■□□□□ 0.68
SRPRA-206ENST00000532259 ZBTB40Q9NUA8 1239 aa19.33■□□□□ 0.68
SRPRA-206ENST00000532259 ZC3H6P61129 1189 aaKnown RBP19.32■□□□□ 0.68
SRPRA-206ENST00000532259 IL17REQ8NFR9 667 aa19.32■□□□□ 0.68
SRPRA-206ENST00000532259 TSPYL4Q9UJ04 414 aa19.32■□□□□ 0.68
SRPRA-206ENST00000532259 RTL1A6NKG5 1358 aa19.32■□□□□ 0.68
SRPRA-206ENST00000532259 RGPD2P0DJD1 1756 aa19.32■□□□□ 0.68
SRPRA-206ENST00000532259 PDZRN3Q9UPQ7 1066 aa19.32■□□□□ 0.68
SRPRA-206ENST00000532259 GNAT3A8MTJ3 354 aa19.31■□□□□ 0.68
SRPRA-206ENST00000532259 CABLES1Q8TDN4 633 aa19.31■□□□□ 0.68
SRPRA-206ENST00000532259 MSH6P52701 1360 aa19.31■□□□□ 0.68
SRPRA-206ENST00000532259 TRPM3Q9HCF6 1732 aaPredicted RBP19.3■□□□□ 0.68
SRPRA-206ENST00000532259 C8orf34Q49A92 452 aa19.3■□□□□ 0.68
SRPRA-206ENST00000532259 STRCQ7RTU9 1775 aa19.3■□□□□ 0.68
SRPRA-206ENST00000532259 AAMPQ13685 434 aa19.29■□□□□ 0.68
SRPRA-206ENST00000532259 FAM161AQ3B820 660 aa19.29■□□□□ 0.68
SRPRA-206ENST00000532259 NECTIN2Q92692 538 aa19.28■□□□□ 0.68
SRPRA-206ENST00000532259 USP19O94966 1318 aa19.28■□□□□ 0.68
SRPRA-206ENST00000532259 ZBTB7BO15156 539 aaPredicted RBP19.28■□□□□ 0.68
SRPRA-206ENST00000532259 ANKRD24Q8TF21 1146 aa19.27■□□□□ 0.68
SRPRA-206ENST00000532259 ARHGAP45Q92619 1136 aa19.27■□□□□ 0.68
SRPRA-206ENST00000532259 IPO9Q96P70 1041 aaKnown RBP19.27■□□□□ 0.68
SRPRA-206ENST00000532259 ZNF335Q9H4Z2 1342 aaPredicted RBP19.27■□□□□ 0.68
SRPRA-206ENST00000532259 BCL11AQ9H165 835 aa19.27■□□□□ 0.67
SRPRA-206ENST00000532259 LGR6Q9HBX8 967 aa19.27■□□□□ 0.67
SRPRA-206ENST00000532259 SLIT3O75094 1523 aa19.27■□□□□ 0.67
SRPRA-206ENST00000532259 MAP3K5Q99683 1374 aa19.27■□□□□ 0.67
SRPRA-206ENST00000532259 ABCC4O15439 1325 aa19.26■□□□□ 0.67
SRPRA-206ENST00000532259 ANP32EQ9BTT0 268 aa19.26■□□□□ 0.67
SRPRA-206ENST00000532259 SLC4A2P04920 1241 aa19.25■□□□□ 0.67
SRPRA-206ENST00000532259 G2E3Q7L622 706 aa19.25■□□□□ 0.67
SRPRA-206ENST00000532259 KIAA0232Q92628 1395 aa19.25■□□□□ 0.67
SRPRA-206ENST00000532259 CADPS2Q86UW7 1296 aa19.25■□□□□ 0.67
SRPRA-206ENST00000532259 MED1Q15648 1581 aaPredicted RBP19.25■□□□□ 0.67
SRPRA-206ENST00000532259 NOP58Q9Y2X3 529 aaKnown RBP19.24■□□□□ 0.67
SRPRA-206ENST00000532259 KIF1AQ12756 1690 aa19.23■□□□□ 0.67
SRPRA-206ENST00000532259 HTATSF1O43719 755 aaKnown RBP19.23■□□□□ 0.67
SRPRA-206ENST00000532259 HDAC1Q13547 482 aaPredicted RBP19.23■□□□□ 0.67
SRPRA-206ENST00000532259 RGS12O14924 1447 aa19.23■□□□□ 0.67
SRPRA-206ENST00000532259 RGPD5Q99666 1765 aa19.22■□□□□ 0.67
SRPRA-206ENST00000532259 CHRNA2Q15822 529 aa19.22■□□□□ 0.67
SRPRA-206ENST00000532259 MPRIPQ6WCQ1 1025 aa19.22■□□□□ 0.67
SRPRA-206ENST00000532259 API5Q9BZZ5 524 aaKnown RBP19.22■□□□□ 0.67
SRPRA-206ENST00000532259 ALS2Q96Q42 1657 aa19.21■□□□□ 0.67
SRPRA-206ENST00000532259 XIRP1Q702N8 1843 aaKnown RBP19.21■□□□□ 0.67
SRPRA-206ENST00000532259 ZBTB47Q9UFB7 747 aaPredicted RBP19.21■□□□□ 0.67
SRPRA-206ENST00000532259 F6X3S4 739 aa19.2■□□□□ 0.66
SRPRA-206ENST00000532259 TAF7Q15545 349 aaPredicted RBP19.2■□□□□ 0.66
SRPRA-206ENST00000532259 ZNF530Q6P9A1 599 aaPredicted RBP19.2■□□□□ 0.66
SRPRA-206ENST00000532259 SIRT2Q8IXJ6 389 aa19.2■□□□□ 0.66
SRPRA-206ENST00000532259 PHRF1Q9P1Y6 1649 aaKnown RBP19.2■□□□□ 0.66
SRPRA-206ENST00000532259 KCNQ3O43525 872 aa19.2■□□□□ 0.66
SRPRA-206ENST00000532259 SEC24BO95487 1268 aa19.2■□□□□ 0.66
SRPRA-206ENST00000532259 LRRC37A3O60309 1634 aa19.2■□□□□ 0.66
SRPRA-206ENST00000532259 DCCP43146 1447 aa19.2■□□□□ 0.66
SRPRA-206ENST00000532259 PXDNQ92626 1479 aa19.2■□□□□ 0.66
SRPRA-206ENST00000532259 BRINP3Q76B58 766 aa19.19■□□□□ 0.66
SRPRA-206ENST00000532259 AEBP2Q6ZN18 517 aaPredicted RBP19.19■□□□□ 0.66
SRPRA-206ENST00000532259 NPHP3Q7Z494 1330 aa19.19■□□□□ 0.66
SRPRA-206ENST00000532259 SLC4A10Q6U841 1118 aa19.18■□□□□ 0.66
SRPRA-206ENST00000532259 ERBB3P21860 1342 aa19.18■□□□□ 0.66
SRPRA-206ENST00000532259 SMC5Q8IY18 1101 aa19.18■□□□□ 0.66
SRPRA-206ENST00000532259 LNPKQ9C0E8 428 aa19.18■□□□□ 0.66
SRPRA-206ENST00000532259 NCOA3Q9Y6Q9 1424 aa19.17■□□□□ 0.66
SRPRA-206ENST00000532259 CEMIPQ8WUJ3 1361 aa19.17■□□□□ 0.66
SRPRA-206ENST00000532259 SLC4A3P48751 1232 aa19.16■□□□□ 0.66
SRPRA-206ENST00000532259 NLRP2Q9NX02 1062 aa19.16■□□□□ 0.66
SRPRA-206ENST00000532259 PLEKHO1Q53GL0 409 aaPredicted RBP19.15■□□□□ 0.66
SRPRA-206ENST00000532259 INTS3Q68E01 1043 aaKnown RBP19.15■□□□□ 0.66
SRPRA-206ENST00000532259 SPATA31A3Q5VYP0 1347 aa19.15■□□□□ 0.66
SRPRA-206ENST00000532259 HAP1P54257 671 aaPredicted RBP19.15■□□□□ 0.66
SRPRA-206ENST00000532259 MEIS3Q99687 375 aa19.14■□□□□ 0.66
SRPRA-206ENST00000532259 TNS3Q68CZ2 1445 aa19.14■□□□□ 0.65
SRPRA-206ENST00000532259 AKAP4Q5JQC9 854 aa19.14■□□□□ 0.65
SRPRA-206ENST00000532259 ANKRD45Q5TZF3 282 aa19.13■□□□□ 0.65
SRPRA-206ENST00000532259 SLAIN2Q9P270 581 aa19.13■□□□□ 0.65
SRPRA-206ENST00000532259 STK31Q9BXU1 1019 aa19.13■□□□□ 0.65
SRPRA-206ENST00000532259 PTPRCP08575 1304 aa19.12■□□□□ 0.65
SRPRA-206ENST00000532259 NCAPD2Q15021 1401 aa19.12■□□□□ 0.65
SRPRA-206ENST00000532259 EIF2S2P20042 333 aaKnown RBP19.12■□□□□ 0.65
SRPRA-206ENST00000532259 RNMTO43148 476 aaKnown RBP19.11■□□□□ 0.65
SRPRA-206ENST00000532259 CSB-PGBD3P0DP91 1061 aa19.11■□□□□ 0.65
SRPRA-206ENST00000532259 NUCB1Q02818 461 aa19.11■□□□□ 0.65
SRPRA-206ENST00000532259 TEFQ10587 303 aa19.11■□□□□ 0.65
SRPRA-206ENST00000532259 FLIIQ13045 1269 aa19.11■□□□□ 0.65
SRPRA-206ENST00000532259 C1orf141Q5JVX7 400 aa19.11■□□□□ 0.65
SRPRA-206ENST00000532259 EIF4A1P60842 406 aaKnown RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms