RNA–Protein interactions for RNA: ENST00000531990.1

CCS-207, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 868 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-207ENST00000531990 DDX54Q8TDD1 881 aaKnown RBP27.96■■■□□ 2.07
CCS-207ENST00000531990 SHANK3Q9BYB0 1731 aa27.93■■■□□ 2.06
CCS-207ENST00000531990 SULT6B1Q6IMI4 303 aa27.93■■■□□ 2.06
CCS-207ENST00000531990 PKD1L3Q7Z443 1732 aa27.92■■■□□ 2.06
CCS-207ENST00000531990 PLEKHG2Q9H7P9 1386 aa27.92■■■□□ 2.06
CCS-207ENST00000531990 SPG7Q9UQ90 795 aa27.92■■■□□ 2.06
CCS-207ENST00000531990 NUDCQ9Y266 331 aa27.92■■■□□ 2.06
CCS-207ENST00000531990 BCL9O00512 1426 aa27.92■■■□□ 2.06
CCS-207ENST00000531990 PCDH11XQ9BZA7 1347 aa27.92■■■□□ 2.06
CCS-207ENST00000531990 PCDH11YQ9BZA8 1340 aa27.92■■■□□ 2.06
CCS-207ENST00000531990 EP400Q96L91 3159 aa27.91■■■□□ 2.06
CCS-207ENST00000531990 SBF2Q86WG5 1849 aa27.91■■■□□ 2.06
CCS-207ENST00000531990 U2SURPO15042 1029 aaKnown RBP27.91■■■□□ 2.06
CCS-207ENST00000531990 TRIM37O94972 964 aa27.91■■■□□ 2.06
CCS-207ENST00000531990 KDRP35968 1356 aa27.9■■■□□ 2.06
CCS-207ENST00000531990 AEBP1Q8IUX7 1158 aa27.9■■■□□ 2.06
CCS-207ENST00000531990 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.9■■■□□ 2.06
CCS-207ENST00000531990 MYBBP1AQ9BQG0 1328 aaKnown RBP27.89■■■□□ 2.05
CCS-207ENST00000531990 PRKRIP1Q9H875 184 aaPredicted RBP27.88■■■□□ 2.05
CCS-207ENST00000531990 TNS1Q9HBL0 1735 aaKnown RBP27.87■■■□□ 2.05
CCS-207ENST00000531990 KAT6BQ8WYB5 2073 aa27.87■■■□□ 2.05
CCS-207ENST00000531990 HMOX1P09601 288 aa27.87■■■□□ 2.05
CCS-207ENST00000531990 PLEKHO1Q53GL0 409 aaPredicted RBP27.86■■■□□ 2.05
CCS-207ENST00000531990 BAG6P46379 1132 aa27.85■■■□□ 2.05
CCS-207ENST00000531990 AMOTQ4VCS5 1084 aa27.85■■■□□ 2.05
CCS-207ENST00000531990 BCL11BQ9C0K0 894 aaPredicted RBP27.83■■■□□ 2.05
CCS-207ENST00000531990 NHSQ6T4R5 1651 aa27.83■■■□□ 2.05
CCS-207ENST00000531990 CYP27B1O15528 508 aa27.82■■■□□ 2.04
CCS-207ENST00000531990 ACSBG1Q96GR2 724 aa27.82■■■□□ 2.04
CCS-207ENST00000531990 APBA3O96018 575 aa27.81■■■□□ 2.04
CCS-207ENST00000531990 U2AF1L5P0DN76 240 aaPredicted RBP27.81■■■□□ 2.04
CCS-207ENST00000531990 U2AF1Q01081 240 aaKnown RBP eCLIP27.81■■■□□ 2.04
CCS-207ENST00000531990 IFNL2Q8IZJ0 200 aa27.81■■■□□ 2.04
CCS-207ENST00000531990 DOT1LQ8TEK3 1739 aa27.81■■■□□ 2.04
CCS-207ENST00000531990 ANP32CO43423 234 aa27.78■■■□□ 2.04
CCS-207ENST00000531990 ZNF530Q6P9A1 599 aaPredicted RBP27.78■■■□□ 2.04
CCS-207ENST00000531990 DEFB132Q7Z7B7 95 aa27.78■■■□□ 2.04
CCS-207ENST00000531990 KCNQ2O43526 872 aa27.77■■■□□ 2.04
CCS-207ENST00000531990 PHKG2P15735 406 aa27.77■■■□□ 2.04
CCS-207ENST00000531990 SYTL4Q96C24 671 aaPredicted RBP27.77■■■□□ 2.04
CCS-207ENST00000531990 HSP90AB1P08238 724 aaKnown RBP27.75■■■□□ 2.03
CCS-207ENST00000531990 NKX1-1Q15270 411 aaPredicted RBP27.75■■■□□ 2.03
CCS-207ENST00000531990 C1orf141Q5JVX7 400 aa27.75■■■□□ 2.03
CCS-207ENST00000531990 PRIM1P49642 420 aaKnown RBP27.74■■■□□ 2.03
CCS-207ENST00000531990 EN1Q05925 392 aaPredicted RBP27.74■■■□□ 2.03
CCS-207ENST00000531990 PTF1AQ7RTS3 328 aa27.74■■■□□ 2.03
CCS-207ENST00000531990 RSPH6AQ9H0K4 717 aa27.73■■■□□ 2.03
CCS-207ENST00000531990 BTAF1O14981 1849 aa27.73■■■□□ 2.03
CCS-207ENST00000531990 FCHSD2O94868 740 aa27.72■■■□□ 2.03
CCS-207ENST00000531990 PRKAR2BP31323 418 aa27.72■■■□□ 2.03
CCS-207ENST00000531990 RGPD3A6NKT7 1758 aaPredicted RBP27.71■■■□□ 2.03
CCS-207ENST00000531990 RGPD4Q7Z3J3 1758 aa27.71■■■□□ 2.03
CCS-207ENST00000531990 TOGARAM1Q9Y4F4 1720 aa27.7■■■□□ 2.02
CCS-207ENST00000531990 PLSCR1O15162 318 aa27.69■■■□□ 2.02
CCS-207ENST00000531990 NEFMP07197 916 aa27.69■■■□□ 2.02
CCS-207ENST00000531990 DCAF5Q96JK2 942 aa27.69■■■□□ 2.02
CCS-207ENST00000531990 ITGB4P16144 1822 aa27.69■■■□□ 2.02
CCS-207ENST00000531990 EZH2Q15910 746 aaKnown RBP27.68■■■□□ 2.02
CCS-207ENST00000531990 MTHFSDQ2M296 383 aaKnown RBP27.68■■■□□ 2.02
CCS-207ENST00000531990 AKAP4Q5JQC9 854 aa27.68■■■□□ 2.02
CCS-207ENST00000531990 CAMKK2Q96RR4 588 aa27.68■■■□□ 2.02
CCS-207ENST00000531990 PNNQ9H307 717 aaKnown RBP27.68■■■□□ 2.02
CCS-207ENST00000531990 GAS2L2Q8NHY3 880 aa27.67■■■□□ 2.02
CCS-207ENST00000531990 MPRIPQ6WCQ1 1025 aa27.66■■■□□ 2.02
CCS-207ENST00000531990 WDR43Q15061 677 aaKnown RBP eCLIP27.65■■■□□ 2.02
CCS-207ENST00000531990 TMOD3Q9NYL9 352 aa27.64■■■□□ 2.02
CCS-207ENST00000531990 RREB1Q92766 1687 aa27.63■■■□□ 2.01
CCS-207ENST00000531990 ERVV-2B6SEH9 535 aa27.63■■■□□ 2.01
CCS-207ENST00000531990 PHACTR3Q96KR7 559 aa27.63■■■□□ 2.01
CCS-207ENST00000531990 SCN11AQ9UI33 1791 aa27.63■■■□□ 2.01
CCS-207ENST00000531990 KDM6AO15550 1401 aaPredicted RBP27.62■■■□□ 2.01
CCS-207ENST00000531990 VIRMAQ69YN4 1812 aaKnown RBP27.61■■■□□ 2.01
CCS-207ENST00000531990 CABP4P57796 275 aa27.6■■■□□ 2.01
CCS-207ENST00000531990 MAPK8IP3Q9UPT6 1336 aa27.6■■■□□ 2.01
CCS-207ENST00000531990 GNAT3A8MTJ3 354 aa27.59■■■□□ 2.01
CCS-207ENST00000531990 TXNRD1Q16881 649 aa27.59■■■□□ 2.01
CCS-207ENST00000531990 MAP3K5Q99683 1374 aa27.59■■■□□ 2.01
CCS-207ENST00000531990 PIGBQ92521 554 aa27.58■■■□□ 2.01
CCS-207ENST00000531990 NUP188Q5SRE5 1749 aa27.58■■■□□ 2.01
CCS-207ENST00000531990 SMARCC1Q92922 1105 aaPredicted RBP27.57■■■□□ 2
CCS-207ENST00000531990 RNMTO43148 476 aaKnown RBP27.56■■■□□ 2
CCS-207ENST00000531990 LY75O60449 1722 aa27.55■■■□□ 2
CCS-207ENST00000531990 PLEKHF1Q96S99 279 aa27.55■■■□□ 2
CCS-207ENST00000531990 NBPF14Q5TI25 921 aa27.54■■■□□ 2
CCS-207ENST00000531990 PROM2Q8N271 834 aa27.54■■■□□ 2
CCS-207ENST00000531990 LGR6Q9HBX8 967 aa27.54■■■□□ 2
CCS-207ENST00000531990 MRS2Q9HD23 443 aa27.54■■■□□ 2
CCS-207ENST00000531990 ADAMTS7Q9UKP4 1686 aa27.54■■■□□ 2
CCS-207ENST00000531990 PALLDQ8WX93 1383 aa27.53■■■□□ 2
CCS-207ENST00000531990 ADAMTS8Q9UP79 889 aa27.53■■■□□ 2
CCS-207ENST00000531990 SLC27A3Q5K4L6 730 aa27.52■■■□□ 2
CCS-207ENST00000531990 NFATC2IPQ8NCF5 419 aa27.52■■■□□ 2
CCS-207ENST00000531990 RTF1Q92541 710 aaKnown RBP27.52■■■□□ 2
CCS-207ENST00000531990 CCDC184Q52MB2 194 aa27.51■■□□□ 1.99
CCS-207ENST00000531990 SLC52A2Q9HAB3 445 aa27.51■■□□□ 1.99
CCS-207ENST00000531990 MRC1P22897 1456 aa27.5■■□□□ 1.99
CCS-207ENST00000531990 DLG5Q8TDM6 1919 aa27.49■■□□□ 1.99
CCS-207ENST00000531990 HTATSF1O43719 755 aaKnown RBP27.49■■□□□ 1.99
CCS-207ENST00000531990 NFE2L2Q16236 605 aa27.49■■□□□ 1.99
CCS-207ENST00000531990 CCNL1Q9UK58 526 aaPredicted RBP27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 134.3 ms