RNA–Protein interactions for RNA: ENST00000531916.5

CSRP1-214, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 5 BASIC

Gene CSRP1, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-214ENST00000531916 FLT4P35916 1363 aa25.32■■□□□ 1.64
CSRP1-214ENST00000531916 ZBTB7AO95365 584 aa25.32■■□□□ 1.64
CSRP1-214ENST00000531916 NSD2O96028 1365 aa25.31■■□□□ 1.64
CSRP1-214ENST00000531916 SMG6Q86US8 1419 aaKnown RBP25.31■■□□□ 1.64
CSRP1-214ENST00000531916 CGNL1Q0VF96 1302 aa25.31■■□□□ 1.64
CSRP1-214ENST00000531916 USHBP1Q8N6Y0 703 aa25.3■■□□□ 1.64
CSRP1-214ENST00000531916 DOT1LQ8TEK3 1739 aa25.29■■□□□ 1.64
CSRP1-214ENST00000531916 PRIM1P49642 420 aaKnown RBP25.29■■□□□ 1.64
CSRP1-214ENST00000531916 CCER1Q8TC90 406 aaPredicted RBP25.29■■□□□ 1.64
CSRP1-214ENST00000531916 ZNF827Q17R98 1081 aa25.28■■□□□ 1.64
CSRP1-214ENST00000531916 SLC27A3Q5K4L6 730 aa25.28■■□□□ 1.64
CSRP1-214ENST00000531916 SGIP1Q9BQI5 828 aa25.28■■□□□ 1.64
CSRP1-214ENST00000531916 MTFR1LQ9H019 292 aa25.27■■□□□ 1.64
CSRP1-214ENST00000531916 ATF5Q9Y2D1 282 aaPredicted RBP25.27■■□□□ 1.64
CSRP1-214ENST00000531916 EMILIN1Q9Y6C2 1016 aa25.27■■□□□ 1.64
CSRP1-214ENST00000531916 AKT1S1Q96B36 256 aa25.26■■□□□ 1.63
CSRP1-214ENST00000531916 NCAPD2Q15021 1401 aa25.26■■□□□ 1.63
CSRP1-214ENST00000531916 ANKRD26Q9UPS8 1709 aa25.26■■□□□ 1.63
CSRP1-214ENST00000531916 RAPGEF4Q8WZA2 1011 aa25.25■■□□□ 1.63
CSRP1-214ENST00000531916 SYTL4Q96C24 671 aaPredicted RBP25.24■■□□□ 1.63
CSRP1-214ENST00000531916 TATP17735 454 aaPredicted RBP25.22■■□□□ 1.63
CSRP1-214ENST00000531916 LY75O60449 1722 aa25.22■■□□□ 1.63
CSRP1-214ENST00000531916 WASHC2AQ641Q2 1341 aa25.2■■□□□ 1.62
CSRP1-214ENST00000531916 EIF4G2P78344 907 aaKnown RBP eCLIP25.2■■□□□ 1.62
CSRP1-214ENST00000531916 PCDH11XQ9BZA7 1347 aa25.19■■□□□ 1.62
CSRP1-214ENST00000531916 PCDH11YQ9BZA8 1340 aa25.19■■□□□ 1.62
CSRP1-214ENST00000531916 HSPA5P11021 654 aaKnown RBP25.19■■□□□ 1.62
CSRP1-214ENST00000531916 QSER1Q2KHR3 1735 aa25.19■■□□□ 1.62
CSRP1-214ENST00000531916 KCNQ4P56696 695 aa25.18■■□□□ 1.62
CSRP1-214ENST00000531916 POLKQ9UBT6 870 aa25.18■■□□□ 1.62
CSRP1-214ENST00000531916 CYP27B1O15528 508 aa25.17■■□□□ 1.62
CSRP1-214ENST00000531916 PKD1L3Q7Z443 1732 aa25.17■■□□□ 1.62
CSRP1-214ENST00000531916 PNPLA7Q6ZV29 1317 aa25.16■■□□□ 1.62
CSRP1-214ENST00000531916 FHDC1Q9C0D6 1143 aaPredicted RBP25.16■■□□□ 1.62
CSRP1-214ENST00000531916 PPM1GO15355 546 aaPredicted RBP25.15■■□□□ 1.62
CSRP1-214ENST00000531916 SYT17Q9BSW7 474 aa25.15■■□□□ 1.62
CSRP1-214ENST00000531916 SLC16A10Q8TF71 515 aa25.14■■□□□ 1.62
CSRP1-214ENST00000531916 KAT6BQ8WYB5 2073 aa25.14■■□□□ 1.61
CSRP1-214ENST00000531916 ARXQ96QS3 562 aa25.13■■□□□ 1.61
CSRP1-214ENST00000531916 EYA1Q99502 592 aa25.13■■□□□ 1.61
CSRP1-214ENST00000531916 POLR3GLQ9BT43 218 aa25.13■■□□□ 1.61
CSRP1-214ENST00000531916 CCNL1Q9UK58 526 aaPredicted RBP25.13■■□□□ 1.61
CSRP1-214ENST00000531916 MAP3K5Q99683 1374 aa25.13■■□□□ 1.61
CSRP1-214ENST00000531916 COL24A1Q17RW2 1714 aa25.12■■□□□ 1.61
CSRP1-214ENST00000531916 TOGARAM1Q9Y4F4 1720 aa25.12■■□□□ 1.61
CSRP1-214ENST00000531916 TUBGCP6Q96RT7 1819 aa25.12■■□□□ 1.61
CSRP1-214ENST00000531916 NKX1-1Q15270 411 aaPredicted RBP25.11■■□□□ 1.61
CSRP1-214ENST00000531916 TFCP2L1Q9NZI6 479 aa25.11■■□□□ 1.61
CSRP1-214ENST00000531916 MAP2P11137 1827 aaKnown RBP25.1■■□□□ 1.61
CSRP1-214ENST00000531916 DCAF8L1A6NGE4 600 aa25.1■■□□□ 1.61
CSRP1-214ENST00000531916 YY1P25490 414 aa25.1■■□□□ 1.61
CSRP1-214ENST00000531916 PANK3Q9H999 370 aa25.1■■□□□ 1.61
CSRP1-214ENST00000531916 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.09■■□□□ 1.61
CSRP1-214ENST00000531916 PALLDQ8WX93 1383 aa25.07■■□□□ 1.6
CSRP1-214ENST00000531916 EIF4A2Q14240 407 aaKnown RBP25.07■■□□□ 1.6
CSRP1-214ENST00000531916 SPG7Q9UQ90 795 aa25.07■■□□□ 1.6
CSRP1-214ENST00000531916 MPRIPQ6WCQ1 1025 aa25.06■■□□□ 1.6
CSRP1-214ENST00000531916 PLEKHG2Q9H7P9 1386 aa25.05■■□□□ 1.6
CSRP1-214ENST00000531916 TNNT2P45379 298 aaPredicted RBP25.05■■□□□ 1.6
CSRP1-214ENST00000531916 C5P01031 1676 aa25.04■■□□□ 1.6
CSRP1-214ENST00000531916 COL23A1Q86Y22 540 aaPredicted RBP25.03■■□□□ 1.6
CSRP1-214ENST00000531916 PIGBQ92521 554 aa25.03■■□□□ 1.6
CSRP1-214ENST00000531916 ITGB4P16144 1822 aa25.02■■□□□ 1.6
CSRP1-214ENST00000531916 IGSF1Q8N6C5 1336 aa25.02■■□□□ 1.6
CSRP1-214ENST00000531916 PHKG2P15735 406 aa25.01■■□□□ 1.59
CSRP1-214ENST00000531916 SMARCC1Q92922 1105 aaPredicted RBP25.01■■□□□ 1.59
CSRP1-214ENST00000531916 POLD1P28340 1107 aa25■■□□□ 1.59
CSRP1-214ENST00000531916 HMGB2P26583 209 aaKnown RBP24.99■■□□□ 1.59
CSRP1-214ENST00000531916 TAF1LQ8IZX4 1826 aa24.98■■□□□ 1.59
CSRP1-214ENST00000531916 IFNL2Q8IZJ0 200 aa24.98■■□□□ 1.59
CSRP1-214ENST00000531916 C4BP0C0L5 1744 aa24.96■■□□□ 1.59
CSRP1-214ENST00000531916 MORC1Q86VD1 984 aa24.95■■□□□ 1.58
CSRP1-214ENST00000531916 AMIGO3Q86WK7 504 aa24.94■■□□□ 1.58
CSRP1-214ENST00000531916 FLAD1Q8NFF5 587 aa24.94■■□□□ 1.58
CSRP1-214ENST00000531916 TMOD3Q9NYL9 352 aa24.94■■□□□ 1.58
CSRP1-214ENST00000531916 KIF7Q2M1P5 1343 aa24.93■■□□□ 1.58
CSRP1-214ENST00000531916 LOC102724428A0A0B4J2F2 783 aa24.93■■□□□ 1.58
CSRP1-214ENST00000531916 MSH5O43196 834 aa24.93■■□□□ 1.58
CSRP1-214ENST00000531916 SIK1P57059 783 aa24.93■■□□□ 1.58
CSRP1-214ENST00000531916 AMER1Q5JTC6 1135 aaPredicted RBP24.93■■□□□ 1.58
CSRP1-214ENST00000531916 ASAP1Q9ULH1 1129 aa24.93■■□□□ 1.58
CSRP1-214ENST00000531916 KNSTRNQ9Y448 316 aa24.92■■□□□ 1.58
CSRP1-214ENST00000531916 UTRNP46939 3433 aa24.92■■□□□ 1.58
CSRP1-214ENST00000531916 NLGN2Q8NFZ4 835 aa24.91■■□□□ 1.58
CSRP1-214ENST00000531916 MSL1Q68DK7 614 aa24.9■■□□□ 1.58
CSRP1-214ENST00000531916 LINC00116Q8NCU8 138 aa24.9■■□□□ 1.58
CSRP1-214ENST00000531916 ATG3Q9NT62 314 aa24.9■■□□□ 1.58
CSRP1-214ENST00000531916 ITPK1Q13572 414 aa24.89■■□□□ 1.58
CSRP1-214ENST00000531916 KLHL34Q8N239 644 aa24.89■■□□□ 1.58
CSRP1-214ENST00000531916 AK7Q96M32 723 aa24.89■■□□□ 1.58
CSRP1-214ENST00000531916 AEBP1Q8IUX7 1158 aa24.88■■□□□ 1.57
CSRP1-214ENST00000531916 KDRP35968 1356 aa24.88■■□□□ 1.57
CSRP1-214ENST00000531916 UBR3Q6ZT12 1888 aa24.87■■□□□ 1.57
CSRP1-214ENST00000531916 KDM6AO15550 1401 aaPredicted RBP24.87■■□□□ 1.57
CSRP1-214ENST00000531916 ERVV-2B6SEH9 535 aa24.87■■□□□ 1.57
CSRP1-214ENST00000531916 AMOTQ4VCS5 1084 aa24.87■■□□□ 1.57
CSRP1-214ENST00000531916 PLEKHO1Q53GL0 409 aaPredicted RBP24.87■■□□□ 1.57
CSRP1-214ENST00000531916 DCAF5Q96JK2 942 aa24.87■■□□□ 1.57
CSRP1-214ENST00000531916 HSP90AB1P08238 724 aaKnown RBP24.86■■□□□ 1.57
CSRP1-214ENST00000531916 IL13P35225 146 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms