RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 SYTL4Q96C24 671 aaPredicted RBP24.44■■□□□ 1.5
PKP3-208ENST00000531857 NSD2O96028 1365 aa24.43■■□□□ 1.5
PKP3-208ENST00000531857 PNPLA7Q6ZV29 1317 aa24.43■■□□□ 1.5
PKP3-208ENST00000531857 MEGF6O75095 1541 aa24.43■■□□□ 1.5
PKP3-208ENST00000531857 ANKRD36BQ8N2N9 1353 aa24.42■■□□□ 1.5
PKP3-208ENST00000531857 AMPHP49418 695 aa24.42■■□□□ 1.5
PKP3-208ENST00000531857 SLC16A10Q8TF71 515 aa24.4■■□□□ 1.5
PKP3-208ENST00000531857 KLHL34Q8N239 644 aa24.39■■□□□ 1.49
PKP3-208ENST00000531857 ZCRB1Q8TBF4 217 aaKnown RBP24.39■■□□□ 1.49
PKP3-208ENST00000531857 TFCP2L1Q9NZI6 479 aa24.39■■□□□ 1.49
PKP3-208ENST00000531857 RRS1Q15050 365 aaKnown RBP24.37■■□□□ 1.49
PKP3-208ENST00000531857 GPR162Q16538 588 aa24.37■■□□□ 1.49
PKP3-208ENST00000531857 KIF20BQ96Q89 1820 aa24.36■■□□□ 1.49
PKP3-208ENST00000531857 POLD1P28340 1107 aa24.36■■□□□ 1.49
PKP3-208ENST00000531857 NBPF6Q5VWK0 638 aa24.36■■□□□ 1.49
PKP3-208ENST00000531857 NBPF4Q96M43 638 aa24.36■■□□□ 1.49
PKP3-208ENST00000531857 USHBP1Q8N6Y0 703 aa24.35■■□□□ 1.49
PKP3-208ENST00000531857 RTL1A6NKG5 1358 aa24.34■■□□□ 1.49
PKP3-208ENST00000531857 FYB1O15117 783 aa24.34■■□□□ 1.49
PKP3-208ENST00000531857 GGNBP2Q9H3C7 697 aa24.34■■□□□ 1.49
PKP3-208ENST00000531857 C5P01031 1676 aa24.34■■□□□ 1.49
PKP3-208ENST00000531857 TAF1LQ8IZX4 1826 aa24.33■■□□□ 1.49
PKP3-208ENST00000531857 CCNL1Q9UK58 526 aaPredicted RBP24.33■■□□□ 1.49
PKP3-208ENST00000531857 NLGN2Q8NFZ4 835 aa24.32■■□□□ 1.48
PKP3-208ENST00000531857 PELP1Q8IZL8 1130 aaKnown RBP24.31■■□□□ 1.48
PKP3-208ENST00000531857 GOLGB1Q14789 3259 aaKnown RBP24.31■■□□□ 1.48
PKP3-208ENST00000531857 ITGB4P16144 1822 aa24.31■■□□□ 1.48
PKP3-208ENST00000531857 USP47Q96K76 1375 aa24.29■■□□□ 1.48
PKP3-208ENST00000531857 SLC24A1O60721 1099 aa24.29■■□□□ 1.48
PKP3-208ENST00000531857 COL23A1Q86Y22 540 aaPredicted RBP24.29■■□□□ 1.48
PKP3-208ENST00000531857 RAPGEF4Q8WZA2 1011 aa24.28■■□□□ 1.48
PKP3-208ENST00000531857 CGNL1Q0VF96 1302 aa24.28■■□□□ 1.48
PKP3-208ENST00000531857 TOGARAM1Q9Y4F4 1720 aa24.27■■□□□ 1.48
PKP3-208ENST00000531857 MSH5O43196 834 aa24.27■■□□□ 1.48
PKP3-208ENST00000531857 C1QTNF8P60827 252 aa24.27■■□□□ 1.48
PKP3-208ENST00000531857 HSP90AB2PQ58FF8 381 aa24.27■■□□□ 1.48
PKP3-208ENST00000531857 SMG6Q86US8 1419 aaKnown RBP24.27■■□□□ 1.48
PKP3-208ENST00000531857 TMF1P82094 1093 aa24.26■■□□□ 1.47
PKP3-208ENST00000531857 INSRP06213 1382 aa24.25■■□□□ 1.47
PKP3-208ENST00000531857 SENP3-EIF4A1A0A087X0R7 540 aa24.24■■□□□ 1.47
PKP3-208ENST00000531857 TATP17735 454 aaPredicted RBP24.24■■□□□ 1.47
PKP3-208ENST00000531857 MSL1Q68DK7 614 aa24.24■■□□□ 1.47
PKP3-208ENST00000531857 YBX3P16989 372 aaKnown RBP eCLIP24.23■■□□□ 1.47
PKP3-208ENST00000531857 PKD1L3Q7Z443 1732 aa24.23■■□□□ 1.47
PKP3-208ENST00000531857 FLT4P35916 1363 aa24.22■■□□□ 1.47
PKP3-208ENST00000531857 PCDH11XQ9BZA7 1347 aa24.22■■□□□ 1.47
PKP3-208ENST00000531857 PCDH11YQ9BZA8 1340 aa24.22■■□□□ 1.47
PKP3-208ENST00000531857 C4BP0C0L5 1744 aa24.21■■□□□ 1.47
PKP3-208ENST00000531857 PALLDQ8WX93 1383 aa24.2■■□□□ 1.46
PKP3-208ENST00000531857 CYP27B1O15528 508 aa24.2■■□□□ 1.46
PKP3-208ENST00000531857 MPRIPQ6WCQ1 1025 aa24.2■■□□□ 1.46
PKP3-208ENST00000531857 UBR3Q6ZT12 1888 aa24.19■■□□□ 1.46
PKP3-208ENST00000531857 MAP2P11137 1827 aaKnown RBP24.19■■□□□ 1.46
PKP3-208ENST00000531857 CARD14Q9BXL6 1004 aa24.19■■□□□ 1.46
PKP3-208ENST00000531857 ANKRD26Q9UPS8 1709 aa24.18■■□□□ 1.46
PKP3-208ENST00000531857 KIF24Q5T7B8 1368 aa24.17■■□□□ 1.46
PKP3-208ENST00000531857 EMILIN1Q9Y6C2 1016 aa24.17■■□□□ 1.46
PKP3-208ENST00000531857 GIGYF1O75420 1035 aaPredicted RBP24.16■■□□□ 1.46
PKP3-208ENST00000531857 TRIM26Q12899 539 aaPredicted RBP24.16■■□□□ 1.46
PKP3-208ENST00000531857 AMIGO3Q86WK7 504 aa24.15■■□□□ 1.46
PKP3-208ENST00000531857 GRIN3BO60391 1043 aa24.14■■□□□ 1.45
PKP3-208ENST00000531857 NSD3Q9BZ95 1437 aa24.14■■□□□ 1.45
PKP3-208ENST00000531857 NCAPD2Q15021 1401 aa24.13■■□□□ 1.45
PKP3-208ENST00000531857 CDCA8Q53HL2 280 aa24.13■■□□□ 1.45
PKP3-208ENST00000531857 SMIM5Q71RC9 77 aa24.13■■□□□ 1.45
PKP3-208ENST00000531857 FLAD1Q8NFF5 587 aa24.12■■□□□ 1.45
PKP3-208ENST00000531857 PIGBQ92521 554 aa24.12■■□□□ 1.45
PKP3-208ENST00000531857 CD2APQ9Y5K6 639 aa24.11■■□□□ 1.45
PKP3-208ENST00000531857 PPM1GO15355 546 aaPredicted RBP24.1■■□□□ 1.45
PKP3-208ENST00000531857 SMARCC1Q92922 1105 aaPredicted RBP24.1■■□□□ 1.45
PKP3-208ENST00000531857 NKX1-1Q15270 411 aaPredicted RBP24.09■■□□□ 1.45
PKP3-208ENST00000531857 AK7Q96M32 723 aa24.09■■□□□ 1.45
PKP3-208ENST00000531857 PHF14O94880 888 aa24.08■■□□□ 1.45
PKP3-208ENST00000531857 HMGB2P26583 209 aaKnown RBP24.08■■□□□ 1.45
PKP3-208ENST00000531857 EYA1Q99502 592 aa24.06■■□□□ 1.44
PKP3-208ENST00000531857 SPG7Q9UQ90 795 aa24.06■■□□□ 1.44
PKP3-208ENST00000531857 ATP10DQ9P241 1426 aa24.06■■□□□ 1.44
PKP3-208ENST00000531857 WASHC2AQ641Q2 1341 aa24.06■■□□□ 1.44
PKP3-208ENST00000531857 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.05■■□□□ 1.44
PKP3-208ENST00000531857 LINC00116Q8NCU8 138 aa24.05■■□□□ 1.44
PKP3-208ENST00000531857 LOC102724428A0A0B4J2F2 783 aa24.04■■□□□ 1.44
PKP3-208ENST00000531857 SIK1P57059 783 aa24.04■■□□□ 1.44
PKP3-208ENST00000531857 WWC3Q9ULE0 1092 aa24.03■■□□□ 1.44
PKP3-208ENST00000531857 ASAP1Q9ULH1 1129 aa24.03■■□□□ 1.44
PKP3-208ENST00000531857 POLKQ9UBT6 870 aa24.02■■□□□ 1.44
PKP3-208ENST00000531857 ITPK1Q13572 414 aa24.01■■□□□ 1.43
PKP3-208ENST00000531857 TMOD3Q9NYL9 352 aa24.01■■□□□ 1.43
PKP3-208ENST00000531857 SSFA2P28290 1259 aa24■■□□□ 1.43
PKP3-208ENST00000531857 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24■■□□□ 1.43
PKP3-208ENST00000531857 IGSF1Q8N6C5 1336 aa24■■□□□ 1.43
PKP3-208ENST00000531857 CEP350Q5VT06 3117 aa23.99■■□□□ 1.43
PKP3-208ENST00000531857 PHKG2P15735 406 aa23.99■■□□□ 1.43
PKP3-208ENST00000531857 ADCY9O60503 1353 aa23.99■■□□□ 1.43
PKP3-208ENST00000531857 GNPATO15228 680 aa23.98■■□□□ 1.43
PKP3-208ENST00000531857 IFNL2Q8IZJ0 200 aa23.98■■□□□ 1.43
PKP3-208ENST00000531857 KIF13BQ9NQT8 1826 aa23.98■■□□□ 1.43
PKP3-208ENST00000531857 ATP6V1AP38606 617 aa23.97■■□□□ 1.43
PKP3-208ENST00000531857 ATG3Q9NT62 314 aa23.97■■□□□ 1.43
PKP3-208ENST00000531857 N4BP2Q86UW6 1770 aaPredicted RBP23.96■■□□□ 1.43
PKP3-208ENST00000531857 KIAA1551Q9HCM1 1747 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms