RNA–Protein interactions for RNA: ENST00000531625.1

UBXN1-212, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-212ENST00000531625 GOLGB1Q14789 3259 aaKnown RBP26.79■■□□□ 1.88
UBXN1-212ENST00000531625 POLD1P28340 1107 aa26.78■■□□□ 1.88
UBXN1-212ENST00000531625 SYTL4Q96C24 671 aaPredicted RBP26.78■■□□□ 1.88
UBXN1-212ENST00000531625 COL24A1Q17RW2 1714 aa26.78■■□□□ 1.88
UBXN1-212ENST00000531625 NSD2O96028 1365 aa26.77■■□□□ 1.88
UBXN1-212ENST00000531625 TFCP2L1Q9NZI6 479 aa26.77■■□□□ 1.88
UBXN1-212ENST00000531625 RTL1A6NKG5 1358 aa26.76■■□□□ 1.87
UBXN1-212ENST00000531625 FBLN1P23142 703 aa26.76■■□□□ 1.87
UBXN1-212ENST00000531625 MEGF6O75095 1541 aa26.75■■□□□ 1.87
UBXN1-212ENST00000531625 LY75O60449 1722 aa26.74■■□□□ 1.87
UBXN1-212ENST00000531625 KCNQ4P56696 695 aa26.74■■□□□ 1.87
UBXN1-212ENST00000531625 GPR162Q16538 588 aa26.74■■□□□ 1.87
UBXN1-212ENST00000531625 DOT1LQ8TEK3 1739 aa26.73■■□□□ 1.87
UBXN1-212ENST00000531625 SHANK3Q9BYB0 1731 aa26.73■■□□□ 1.87
UBXN1-212ENST00000531625 CGNL1Q0VF96 1302 aa26.73■■□□□ 1.87
UBXN1-212ENST00000531625 RGPD2P0DJD1 1756 aa26.73■■□□□ 1.87
UBXN1-212ENST00000531625 TUBGCP6Q96RT7 1819 aa26.72■■□□□ 1.87
UBXN1-212ENST00000531625 NBPF6Q5VWK0 638 aa26.71■■□□□ 1.87
UBXN1-212ENST00000531625 NBPF4Q96M43 638 aa26.71■■□□□ 1.87
UBXN1-212ENST00000531625 FYB1O15117 783 aa26.7■■□□□ 1.86
UBXN1-212ENST00000531625 CCNL1Q9UK58 526 aaPredicted RBP26.7■■□□□ 1.86
UBXN1-212ENST00000531625 RRS1Q15050 365 aaKnown RBP26.69■■□□□ 1.86
UBXN1-212ENST00000531625 KLHL34Q8N239 644 aa26.68■■□□□ 1.86
UBXN1-212ENST00000531625 USP47Q96K76 1375 aa26.68■■□□□ 1.86
UBXN1-212ENST00000531625 RAPGEF4Q8WZA2 1011 aa26.67■■□□□ 1.86
UBXN1-212ENST00000531625 SMG6Q86US8 1419 aaKnown RBP26.66■■□□□ 1.86
UBXN1-212ENST00000531625 GGNBP2Q9H3C7 697 aa26.66■■□□□ 1.86
UBXN1-212ENST00000531625 C1QTNF8P60827 252 aa26.65■■□□□ 1.86
UBXN1-212ENST00000531625 TMF1P82094 1093 aa26.65■■□□□ 1.86
UBXN1-212ENST00000531625 USHBP1Q8N6Y0 703 aa26.64■■□□□ 1.86
UBXN1-212ENST00000531625 INSRP06213 1382 aa26.63■■□□□ 1.85
UBXN1-212ENST00000531625 TATP17735 454 aaPredicted RBP26.63■■□□□ 1.85
UBXN1-212ENST00000531625 HMGB2P26583 209 aaKnown RBP26.63■■□□□ 1.85
UBXN1-212ENST00000531625 COL23A1Q86Y22 540 aaPredicted RBP26.63■■□□□ 1.85
UBXN1-212ENST00000531625 NLGN2Q8NFZ4 835 aa26.63■■□□□ 1.85
UBXN1-212ENST00000531625 CCER1Q8TC90 406 aaPredicted RBP26.63■■□□□ 1.85
UBXN1-212ENST00000531625 KIF24Q5T7B8 1368 aa26.62■■□□□ 1.85
UBXN1-212ENST00000531625 HSP90AB2PQ58FF8 381 aa26.61■■□□□ 1.85
UBXN1-212ENST00000531625 PCDH11XQ9BZA7 1347 aa26.61■■□□□ 1.85
UBXN1-212ENST00000531625 PCDH11YQ9BZA8 1340 aa26.61■■□□□ 1.85
UBXN1-212ENST00000531625 PELP1Q8IZL8 1130 aaKnown RBP26.6■■□□□ 1.85
UBXN1-212ENST00000531625 FLT4P35916 1363 aa26.59■■□□□ 1.85
UBXN1-212ENST00000531625 MSH5O43196 834 aa26.59■■□□□ 1.85
UBXN1-212ENST00000531625 SENP3-EIF4A1A0A087X0R7 540 aa26.58■■□□□ 1.85
UBXN1-212ENST00000531625 CDCA8Q53HL2 280 aa26.58■■□□□ 1.85
UBXN1-212ENST00000531625 GRIN3BO60391 1043 aa26.57■■□□□ 1.84
UBXN1-212ENST00000531625 FLAD1Q8NFF5 587 aa26.57■■□□□ 1.84
UBXN1-212ENST00000531625 PALLDQ8WX93 1383 aa26.55■■□□□ 1.84
UBXN1-212ENST00000531625 C5P01031 1676 aa26.54■■□□□ 1.84
UBXN1-212ENST00000531625 CYP27B1O15528 508 aa26.54■■□□□ 1.84
UBXN1-212ENST00000531625 YBX3P16989 372 aaKnown RBP eCLIP26.54■■□□□ 1.84
UBXN1-212ENST00000531625 KIF20BQ96Q89 1820 aa26.53■■□□□ 1.84
UBXN1-212ENST00000531625 GIGYF1O75420 1035 aaPredicted RBP26.53■■□□□ 1.84
UBXN1-212ENST00000531625 MPRIPQ6WCQ1 1025 aa26.53■■□□□ 1.84
UBXN1-212ENST00000531625 MSL1Q68DK7 614 aa26.52■■□□□ 1.84
UBXN1-212ENST00000531625 SMARCC1Q92922 1105 aaPredicted RBP26.52■■□□□ 1.84
UBXN1-212ENST00000531625 CLSPNQ9HAW4 1339 aa26.52■■□□□ 1.84
UBXN1-212ENST00000531625 CD2APQ9Y5K6 639 aa26.52■■□□□ 1.84
UBXN1-212ENST00000531625 TAF1LQ8IZX4 1826 aa26.51■■□□□ 1.83
UBXN1-212ENST00000531625 CARD14Q9BXL6 1004 aa26.5■■□□□ 1.83
UBXN1-212ENST00000531625 NCAPD2Q15021 1401 aa26.49■■□□□ 1.83
UBXN1-212ENST00000531625 CEP350Q5VT06 3117 aa26.49■■□□□ 1.83
UBXN1-212ENST00000531625 EMILIN1Q9Y6C2 1016 aa26.49■■□□□ 1.83
UBXN1-212ENST00000531625 NKX1-1Q15270 411 aaPredicted RBP26.48■■□□□ 1.83
UBXN1-212ENST00000531625 PKD1L3Q7Z443 1732 aa26.48■■□□□ 1.83
UBXN1-212ENST00000531625 ITGB4P16144 1822 aa26.47■■□□□ 1.83
UBXN1-212ENST00000531625 TOGARAM1Q9Y4F4 1720 aa26.46■■□□□ 1.83
UBXN1-212ENST00000531625 C4BP0C0L5 1744 aa26.45■■□□□ 1.83
UBXN1-212ENST00000531625 PIGBQ92521 554 aa26.45■■□□□ 1.82
UBXN1-212ENST00000531625 AK7Q96M32 723 aa26.45■■□□□ 1.82
UBXN1-212ENST00000531625 NSD3Q9BZ95 1437 aa26.45■■□□□ 1.82
UBXN1-212ENST00000531625 SPG7Q9UQ90 795 aa26.44■■□□□ 1.82
UBXN1-212ENST00000531625 WASHC2AQ641Q2 1341 aa26.43■■□□□ 1.82
UBXN1-212ENST00000531625 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.43■■□□□ 1.82
UBXN1-212ENST00000531625 AMIGO3Q86WK7 504 aa26.42■■□□□ 1.82
UBXN1-212ENST00000531625 ANKRD26Q9UPS8 1709 aa26.41■■□□□ 1.82
UBXN1-212ENST00000531625 UBR3Q6ZT12 1888 aa26.4■■□□□ 1.82
UBXN1-212ENST00000531625 PPM1GO15355 546 aaPredicted RBP26.4■■□□□ 1.82
UBXN1-212ENST00000531625 MAP2P11137 1827 aaKnown RBP26.39■■□□□ 1.82
UBXN1-212ENST00000531625 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.39■■□□□ 1.82
UBXN1-212ENST00000531625 LOC102724428A0A0B4J2F2 783 aa26.39■■□□□ 1.82
UBXN1-212ENST00000531625 SSFA2P28290 1259 aa26.39■■□□□ 1.82
UBXN1-212ENST00000531625 SIK1P57059 783 aa26.39■■□□□ 1.82
UBXN1-212ENST00000531625 EYA1Q99502 592 aa26.39■■□□□ 1.82
UBXN1-212ENST00000531625 ATP10DQ9P241 1426 aa26.38■■□□□ 1.81
UBXN1-212ENST00000531625 PHF14O94880 888 aa26.36■■□□□ 1.81
UBXN1-212ENST00000531625 LINC00116Q8NCU8 138 aa26.36■■□□□ 1.81
UBXN1-212ENST00000531625 TMOD3Q9NYL9 352 aa26.36■■□□□ 1.81
UBXN1-212ENST00000531625 POLKQ9UBT6 870 aa26.35■■□□□ 1.81
UBXN1-212ENST00000531625 ADCY9O60503 1353 aa26.34■■□□□ 1.81
UBXN1-212ENST00000531625 SMIM5Q71RC9 77 aa26.34■■□□□ 1.81
UBXN1-212ENST00000531625 IFNL2Q8IZJ0 200 aa26.34■■□□□ 1.81
UBXN1-212ENST00000531625 TIMELESSQ9UNS1 1208 aa26.34■■□□□ 1.81
UBXN1-212ENST00000531625 PLEKHG2Q9H7P9 1386 aa26.33■■□□□ 1.81
UBXN1-212ENST00000531625 PHKG2P15735 406 aa26.33■■□□□ 1.81
UBXN1-212ENST00000531625 ASAP1Q9ULH1 1129 aa26.33■■□□□ 1.81
UBXN1-212ENST00000531625 IGSF1Q8N6C5 1336 aa26.33■■□□□ 1.81
UBXN1-212ENST00000531625 ITPK1Q13572 414 aa26.31■■□□□ 1.8
UBXN1-212ENST00000531625 GPBP1L1Q9HC44 474 aaPredicted RBP26.31■■□□□ 1.8
UBXN1-212ENST00000531625 ATP6V1AP38606 617 aa26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms