RNA–Protein interactions for RNA: ENST00000531546.1

CASP4-210, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 921 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-210ENST00000531546 ENAMQ9NRM1 1142 aa11.2□□□□□ -0.62
CASP4-210ENST00000531546 GPAT2Q6NUI2 795 aa11.19□□□□□ -0.62
CASP4-210ENST00000531546 KDF1Q8NAX2 398 aaPredicted RBP11.19□□□□□ -0.62
CASP4-210ENST00000531546 FAM117AQ9C073 453 aa11.19□□□□□ -0.62
CASP4-210ENST00000531546 GPBP1L1Q9HC44 474 aaPredicted RBP11.19□□□□□ -0.62
CASP4-210ENST00000531546 RNF144AP50876 292 aaPredicted RBP11.18□□□□□ -0.62
CASP4-210ENST00000531546 LYPD4Q6UWN0 246 aa11.18□□□□□ -0.62
CASP4-210ENST00000531546 CYLDQ9NQC7 956 aa11.18□□□□□ -0.62
CASP4-210ENST00000531546 GAS6Q14393 721 aa11.17□□□□□ -0.62
CASP4-210ENST00000531546 FOXR1Q6PIV2 292 aa11.17□□□□□ -0.62
CASP4-210ENST00000531546 ATP5J2-PTCD1G3V325 749 aa11.16□□□□□ -0.62
CASP4-210ENST00000531546 GPC1P35052 558 aa11.16□□□□□ -0.62
CASP4-210ENST00000531546 PRICKLE2Q7Z3G6 844 aa11.16□□□□□ -0.62
CASP4-210ENST00000531546 CCDC125Q86Z20 511 aa11.16□□□□□ -0.62
CASP4-210ENST00000531546 MBIPQ9NS73 344 aa11.16□□□□□ -0.62
CASP4-210ENST00000531546 CELA2BP08218 269 aaPredicted RBP11.15□□□□□ -0.62
CASP4-210ENST00000531546 RFC5P40937 340 aa11.15□□□□□ -0.62
CASP4-210ENST00000531546 TRIM22Q8IYM9 498 aa11.15□□□□□ -0.62
CASP4-210ENST00000531546 ZNF837Q96EG3 531 aaPredicted RBP11.15□□□□□ -0.62
CASP4-210ENST00000531546 CUEDC1Q9NWM3 386 aaPredicted RBP11.15□□□□□ -0.62
CASP4-210ENST00000531546 RHOQP17081 205 aa11.13□□□□□ -0.63
CASP4-210ENST00000531546 PHF20L1A8MW92 1017 aa11.12□□□□□ -0.63
CASP4-210ENST00000531546 H7C1W4 665 aa11.12□□□□□ -0.63
CASP4-210ENST00000531546 ZBBXA8MT70 800 aa11.11□□□□□ -0.63
CASP4-210ENST00000531546 MEN1O00255 615 aa11.1□□□□□ -0.63
CASP4-210ENST00000531546 RIPOR1Q6ZS17 1223 aa11.1□□□□□ -0.63
CASP4-210ENST00000531546 DYRK1BQ9Y463 629 aa11.1□□□□□ -0.63
CASP4-210ENST00000531546 PCDHB9Q9Y5E1 797 aa11.1□□□□□ -0.63
CASP4-210ENST00000531546 IGF1RP08069 1367 aa11.09□□□□□ -0.63
CASP4-210ENST00000531546 RNF20Q5VTR2 975 aa11.09□□□□□ -0.63
CASP4-210ENST00000531546 PODNQ7Z5L7 613 aa11.09□□□□□ -0.63
CASP4-210ENST00000531546 ZNF592Q92610 1267 aa11.09□□□□□ -0.63
CASP4-210ENST00000531546 TRERF1Q96PN7 1200 aa11.09□□□□□ -0.63
CASP4-210ENST00000531546 TRIM34Q9BYJ4 488 aa11.09□□□□□ -0.63
CASP4-210ENST00000531546 GIGYF1O75420 1035 aaPredicted RBP11.08□□□□□ -0.64
CASP4-210ENST00000531546 TMEM259Q4ZIN3 620 aa11.08□□□□□ -0.64
CASP4-210ENST00000531546 CC2D2BQ6DHV5 1058 aa11.08□□□□□ -0.64
CASP4-210ENST00000531546 NLRP3Q96P20 1036 aa11.08□□□□□ -0.64
CASP4-210ENST00000531546 GPR25O00155 361 aa11.07□□□□□ -0.64
CASP4-210ENST00000531546 ERVK-9P63128 1117 aa11.07□□□□□ -0.64
CASP4-210ENST00000531546 SLC27A3Q5K4L6 730 aa11.07□□□□□ -0.64
CASP4-210ENST00000531546 A0A1W2PRU2 124 aa11.06□□□□□ -0.64
CASP4-210ENST00000531546 BCRP11274 1271 aa11.06□□□□□ -0.64
CASP4-210ENST00000531546 DBN1Q16643 649 aa11.06□□□□□ -0.64
CASP4-210ENST00000531546 CYP2U1Q7Z449 544 aa11.06□□□□□ -0.64
CASP4-210ENST00000531546 PCMTD1Q96MG8 357 aaPredicted RBP11.06□□□□□ -0.64
CASP4-210ENST00000531546 GOPCQ9HD26 462 aa11.06□□□□□ -0.64
CASP4-210ENST00000531546 NSFL1CQ9UNZ2 370 aaKnown RBP11.06□□□□□ -0.64
CASP4-210ENST00000531546 MCCD1P59942 119 aaPredicted RBP11.05□□□□□ -0.64
CASP4-210ENST00000531546 BEND7Q8N7W2 519 aaPredicted RBP11.05□□□□□ -0.64
CASP4-210ENST00000531546 NEDD1Q8NHV4 660 aa11.05□□□□□ -0.64
CASP4-210ENST00000531546 LRRC4BQ9NT99 713 aa11.05□□□□□ -0.64
CASP4-210ENST00000531546 FBXO45P0C2W1 286 aa11.04□□□□□ -0.64
CASP4-210ENST00000531546 GTPBP3Q969Y2 492 aaKnown RBP11.04□□□□□ -0.64
CASP4-210ENST00000531546 GAS2L1Q99501 681 aaPredicted RBP11.04□□□□□ -0.64
CASP4-210ENST00000531546 CLN3Q13286 438 aa11.03□□□□□ -0.64
CASP4-210ENST00000531546 WDR44Q5JSH3 913 aa11.03□□□□□ -0.64
CASP4-210ENST00000531546 POU4F2Q12837 409 aa11.02□□□□□ -0.65
CASP4-210ENST00000531546 NBPF10Q6P3W6 841 aaKnown RBP11.02□□□□□ -0.65
CASP4-210ENST00000531546 NBPF15Q8N660 670 aa11.02□□□□□ -0.65
CASP4-210ENST00000531546 ZNF330Q9Y3S2 320 aaPredicted RBP11.02□□□□□ -0.65
CASP4-210ENST00000531546 SPATA31C2B4DYI2 1134 aa11.01□□□□□ -0.65
CASP4-210ENST00000531546 MSTNO14793 375 aa11.01□□□□□ -0.65
CASP4-210ENST00000531546 MX2P20592 715 aa11.01□□□□□ -0.65
CASP4-210ENST00000531546 PLA2G4EQ3MJ16 856 aa11.01□□□□□ -0.65
CASP4-210ENST00000531546 DCAF5Q96JK2 942 aa11.01□□□□□ -0.65
CASP4-210ENST00000531546 GRIP2Q9C0E4 1043 aa11.01□□□□□ -0.65
CASP4-210ENST00000531546 ESF1Q9H501 851 aaKnown RBP11.01□□□□□ -0.65
CASP4-210ENST00000531546 CNTNAP5Q8WYK1 1306 aa11.01□□□□□ -0.65
CASP4-210ENST00000531546 ACDQ96AP0 544 aa11□□□□□ -0.65
CASP4-210ENST00000531546 GJD4Q96KN9 370 aaPredicted RBP11□□□□□ -0.65
CASP4-210ENST00000531546 WASLO00401 505 aaPredicted RBP10.99□□□□□ -0.65
CASP4-210ENST00000531546 TAS1R3Q7RTX0 852 aa10.99□□□□□ -0.65
CASP4-210ENST00000531546 NUCKS1Q9H1E3 243 aaKnown RBP10.99□□□□□ -0.65
CASP4-210ENST00000531546 TIMMDC1Q9NPL8 285 aa10.99□□□□□ -0.65
CASP4-210ENST00000531546 NR1H3Q13133 447 aa10.98□□□□□ -0.65
CASP4-210ENST00000531546 ARHGEF10LQ9HCE6 1279 aa10.98□□□□□ -0.65
CASP4-210ENST00000531546 PCDHB11Q9Y5F2 797 aa10.98□□□□□ -0.65
CASP4-210ENST00000531546 F11P03951 625 aa10.97□□□□□ -0.65
CASP4-210ENST00000531546 MAP2K3P46734 347 aa10.97□□□□□ -0.65
CASP4-210ENST00000531546 TRAK2O60296 914 aa10.96□□□□□ -0.65
CASP4-210ENST00000531546 SCTRP47872 440 aa10.96□□□□□ -0.65
CASP4-210ENST00000531546 SPOCK3Q9BQ16 436 aa10.96□□□□□ -0.65
CASP4-210ENST00000531546 OIP5O43482 229 aa10.95□□□□□ -0.66
CASP4-210ENST00000531546 OSBPL3Q9H4L5 887 aa10.95□□□□□ -0.66
CASP4-210ENST00000531546 GALNT6Q8NCL4 622 aa10.94□□□□□ -0.66
CASP4-210ENST00000531546 CFHR5Q9BXR6 569 aa10.94□□□□□ -0.66
CASP4-210ENST00000531546 OXCT2Q9BYC2 517 aaPredicted RBP10.94□□□□□ -0.66
CASP4-210ENST00000531546 PHF24Q9UPV7 400 aa10.94□□□□□ -0.66
CASP4-210ENST00000531546 GNRH1P01148 92 aa10.93□□□□□ -0.66
CASP4-210ENST00000531546 SOCS7O14512 581 aa10.92□□□□□ -0.66
CASP4-210ENST00000531546 ADAM23O75077 832 aa10.92□□□□□ -0.66
CASP4-210ENST00000531546 A0A1B0GTH6 734 aa10.91□□□□□ -0.66
CASP4-210ENST00000531546 ESYT1Q9BSJ8 1104 aa10.91□□□□□ -0.66
CASP4-210ENST00000531546 RAB6BQ9NRW1 208 aa10.91□□□□□ -0.66
CASP4-210ENST00000531546 APBB1O00213 710 aa10.9□□□□□ -0.66
CASP4-210ENST00000531546 MYCP01106 439 aaPredicted RBP10.9□□□□□ -0.66
CASP4-210ENST00000531546 GTF2E1P29083 439 aaPredicted RBP10.9□□□□□ -0.66
CASP4-210ENST00000531546 LBRQ14739 615 aaKnown RBP10.9□□□□□ -0.66
CASP4-210ENST00000531546 ALYREFQ86V81 257 aaKnown RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms