RNA–Protein interactions for RNA: ENST00000531542.1

AMBRA1-210, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-210ENST00000531542 RAPGEF4Q8WZA2 1011 aa18.5■□□□□ 0.55
AMBRA1-210ENST00000531542 SGIP1Q9BQI5 828 aa18.5■□□□□ 0.55
AMBRA1-210ENST00000531542 BTAF1O14981 1849 aa18.5■□□□□ 0.55
AMBRA1-210ENST00000531542 NSD3Q9BZ95 1437 aa18.49■□□□□ 0.55
AMBRA1-210ENST00000531542 AKT1S1Q96B36 256 aa18.49■□□□□ 0.55
AMBRA1-210ENST00000531542 PCGF6Q9BYE7 350 aa18.49■□□□□ 0.55
AMBRA1-210ENST00000531542 NSD2O96028 1365 aa18.48■□□□□ 0.55
AMBRA1-210ENST00000531542 DCAF8L1A6NGE4 600 aa18.48■□□□□ 0.55
AMBRA1-210ENST00000531542 TATP17735 454 aaPredicted RBP18.47■□□□□ 0.55
AMBRA1-210ENST00000531542 SLC16A10Q8TF71 515 aa18.47■□□□□ 0.55
AMBRA1-210ENST00000531542 ATF5Q9Y2D1 282 aaPredicted RBP18.47■□□□□ 0.55
AMBRA1-210ENST00000531542 MYOM1P52179 1685 aa18.47■□□□□ 0.55
AMBRA1-210ENST00000531542 HMGB2P26583 209 aaKnown RBP18.46■□□□□ 0.55
AMBRA1-210ENST00000531542 ZNF827Q17R98 1081 aa18.46■□□□□ 0.55
AMBRA1-210ENST00000531542 NCAPD2Q15021 1401 aa18.46■□□□□ 0.55
AMBRA1-210ENST00000531542 WASHC2AQ641Q2 1341 aa18.46■□□□□ 0.55
AMBRA1-210ENST00000531542 PCDH11XQ9BZA7 1347 aa18.46■□□□□ 0.55
AMBRA1-210ENST00000531542 PCDH11YQ9BZA8 1340 aa18.46■□□□□ 0.55
AMBRA1-210ENST00000531542 KIF20BQ96Q89 1820 aa18.45■□□□□ 0.54
AMBRA1-210ENST00000531542 SYTL4Q96C24 671 aaPredicted RBP18.45■□□□□ 0.54
AMBRA1-210ENST00000531542 EIF4G2P78344 907 aaKnown RBP eCLIP18.44■□□□□ 0.54
AMBRA1-210ENST00000531542 USHBP1Q8N6Y0 703 aa18.44■□□□□ 0.54
AMBRA1-210ENST00000531542 EMILIN1Q9Y6C2 1016 aa18.44■□□□□ 0.54
AMBRA1-210ENST00000531542 MAP3K5Q99683 1374 aa18.43■□□□□ 0.54
AMBRA1-210ENST00000531542 SHANK3Q9BYB0 1731 aa18.43■□□□□ 0.54
AMBRA1-210ENST00000531542 RGPD2P0DJD1 1756 aa18.42■□□□□ 0.54
AMBRA1-210ENST00000531542 SYT17Q9BSW7 474 aa18.42■□□□□ 0.54
AMBRA1-210ENST00000531542 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.42■□□□□ 0.541e-6■■■□□ 15.9
AMBRA1-210ENST00000531542 PLEKHG2Q9H7P9 1386 aa18.42■□□□□ 0.54
AMBRA1-210ENST00000531542 ARXQ96QS3 562 aa18.41■□□□□ 0.54
AMBRA1-210ENST00000531542 FHDC1Q9C0D6 1143 aaPredicted RBP18.41■□□□□ 0.54
AMBRA1-210ENST00000531542 PNPLA7Q6ZV29 1317 aa18.41■□□□□ 0.54
AMBRA1-210ENST00000531542 CYP27B1O15528 508 aa18.4■□□□□ 0.54
AMBRA1-210ENST00000531542 NKX1-1Q15270 411 aaPredicted RBP18.4■□□□□ 0.54
AMBRA1-210ENST00000531542 TFCP2L1Q9NZI6 479 aa18.4■□□□□ 0.54
AMBRA1-210ENST00000531542 POLKQ9UBT6 870 aa18.4■□□□□ 0.54
AMBRA1-210ENST00000531542 KAT6BQ8WYB5 2073 aa18.39■□□□□ 0.53
AMBRA1-210ENST00000531542 YY1P25490 414 aa18.39■□□□□ 0.53
AMBRA1-210ENST00000531542 CCNL1Q9UK58 526 aaPredicted RBP18.39■□□□□ 0.53
AMBRA1-210ENST00000531542 DOT1LQ8TEK3 1739 aa18.39■□□□□ 0.53
AMBRA1-210ENST00000531542 ANKRD26Q9UPS8 1709 aa18.39■□□□□ 0.53
AMBRA1-210ENST00000531542 LY75O60449 1722 aa18.38■□□□□ 0.53
AMBRA1-210ENST00000531542 QSER1Q2KHR3 1735 aa18.38■□□□□ 0.53
AMBRA1-210ENST00000531542 HSPA5P11021 654 aaKnown RBP18.38■□□□□ 0.53
AMBRA1-210ENST00000531542 SPG7Q9UQ90 795 aa18.38■□□□□ 0.53
AMBRA1-210ENST00000531542 PPM1GO15355 546 aaPredicted RBP18.37■□□□□ 0.53
AMBRA1-210ENST00000531542 EYA1Q99502 592 aa18.37■□□□□ 0.53
AMBRA1-210ENST00000531542 KCNQ4P56696 695 aa18.36■□□□□ 0.53
AMBRA1-210ENST00000531542 POLD1P28340 1107 aa18.35■□□□□ 0.53
AMBRA1-210ENST00000531542 CCER1Q8TC90 406 aaPredicted RBP18.35■□□□□ 0.53
AMBRA1-210ENST00000531542 SMARCC1Q92922 1105 aaPredicted RBP18.35■□□□□ 0.53
AMBRA1-210ENST00000531542 PANK3Q9H999 370 aa18.34■□□□□ 0.53
AMBRA1-210ENST00000531542 COL24A1Q17RW2 1714 aa18.34■□□□□ 0.53
AMBRA1-210ENST00000531542 PALLDQ8WX93 1383 aa18.33■□□□□ 0.53
AMBRA1-210ENST00000531542 PKD1L3Q7Z443 1732 aa18.33■□□□□ 0.52
AMBRA1-210ENST00000531542 MPRIPQ6WCQ1 1025 aa18.33■□□□□ 0.52
AMBRA1-210ENST00000531542 FLAD1Q8NFF5 587 aa18.33■□□□□ 0.52
AMBRA1-210ENST00000531542 EIF4A2Q14240 407 aaKnown RBP18.32■□□□□ 0.52
AMBRA1-210ENST00000531542 IFNL2Q8IZJ0 200 aa18.31■□□□□ 0.52
AMBRA1-210ENST00000531542 PIGBQ92521 554 aa18.31■□□□□ 0.52
AMBRA1-210ENST00000531542 POLR3GLQ9BT43 218 aa18.31■□□□□ 0.52
AMBRA1-210ENST00000531542 IGSF1Q8N6C5 1336 aa18.3■□□□□ 0.52
AMBRA1-210ENST00000531542 COL23A1Q86Y22 540 aaPredicted RBP18.3■□□□□ 0.52
AMBRA1-210ENST00000531542 MAP2P11137 1827 aaKnown RBP18.29■□□□□ 0.52
AMBRA1-210ENST00000531542 PHKG2P15735 406 aa18.29■□□□□ 0.52
AMBRA1-210ENST00000531542 TNNT2P45379 298 aaPredicted RBP18.27■□□□□ 0.52
AMBRA1-210ENST00000531542 TMOD3Q9NYL9 352 aa18.26■□□□□ 0.51
AMBRA1-210ENST00000531542 UTRNP46939 3433 aa18.26■□□□□ 0.51
AMBRA1-210ENST00000531542 TOGARAM1Q9Y4F4 1720 aa18.26■□□□□ 0.51
AMBRA1-210ENST00000531542 TUBGCP6Q96RT7 1819 aa18.26■□□□□ 0.51
AMBRA1-210ENST00000531542 LOC102724428A0A0B4J2F2 783 aa18.25■□□□□ 0.51
AMBRA1-210ENST00000531542 SIK1P57059 783 aa18.25■□□□□ 0.51
AMBRA1-210ENST00000531542 MORC1Q86VD1 984 aa18.25■□□□□ 0.51
AMBRA1-210ENST00000531542 KNSTRNQ9Y448 316 aa18.25■□□□□ 0.51
AMBRA1-210ENST00000531542 C5P01031 1676 aa18.25■□□□□ 0.51
AMBRA1-210ENST00000531542 ERVV-2B6SEH9 535 aa18.24■□□□□ 0.51
AMBRA1-210ENST00000531542 HSP90AB1P08238 724 aaKnown RBP18.24■□□□□ 0.51
AMBRA1-210ENST00000531542 AMOTQ4VCS5 1084 aa18.24■□□□□ 0.51
AMBRA1-210ENST00000531542 MSH5O43196 834 aa18.23■□□□□ 0.51
AMBRA1-210ENST00000531542 PLEKHO1Q53GL0 409 aaPredicted RBP18.23■□□□□ 0.51
AMBRA1-210ENST00000531542 DCAF5Q96JK2 942 aa18.23■□□□□ 0.51
AMBRA1-210ENST00000531542 AK7Q96M32 723 aa18.23■□□□□ 0.51
AMBRA1-210ENST00000531542 ITGB4P16144 1822 aa18.23■□□□□ 0.51
AMBRA1-210ENST00000531542 SSFA2P28290 1259 aa18.22■□□□□ 0.51
AMBRA1-210ENST00000531542 AMER1Q5JTC6 1135 aaPredicted RBP18.22■□□□□ 0.51
AMBRA1-210ENST00000531542 ASAP1Q9ULH1 1129 aa18.22■□□□□ 0.51
AMBRA1-210ENST00000531542 GPR162Q16538 588 aa18.21■□□□□ 0.51
AMBRA1-210ENST00000531542 ATG3Q9NT62 314 aa18.21■□□□□ 0.51
AMBRA1-210ENST00000531542 CD2APQ9Y5K6 639 aa18.21■□□□□ 0.51
AMBRA1-210ENST00000531542 C4BP0C0L5 1744 aa18.2■□□□□ 0.5
AMBRA1-210ENST00000531542 KDRP35968 1356 aa18.2■□□□□ 0.5
AMBRA1-210ENST00000531542 ZNF784Q8NCA9 323 aaPredicted RBP18.2■□□□□ 0.5
AMBRA1-210ENST00000531542 TAF1LQ8IZX4 1826 aa18.2■□□□□ 0.5
AMBRA1-210ENST00000531542 KIF7Q2M1P5 1343 aa18.2■□□□□ 0.5
AMBRA1-210ENST00000531542 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.19■□□□□ 0.5
AMBRA1-210ENST00000531542 LINC00116Q8NCU8 138 aa18.19■□□□□ 0.5
AMBRA1-210ENST00000531542 NLGN2Q8NFZ4 835 aa18.19■□□□□ 0.5
AMBRA1-210ENST00000531542 PER1O15534 1290 aaPredicted RBP18.18■□□□□ 0.5
AMBRA1-210ENST00000531542 IL13P35225 146 aa18.18■□□□□ 0.5
AMBRA1-210ENST00000531542 ATP6V1AP38606 617 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms