RNA–Protein interactions for RNA: ENST00000531523.1

SNHG9-201, Transcript of small nucleolar RNA host gene 9, humanhuman

TSL 1 (best) BASIC

Gene SNHG9, Length 275 nt, Biotype lincRNA, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG9-201ENST00000531523 NBPF4Q96M43 638 aa20.81■□□□□ 0.92
SNHG9-201ENST00000531523 SPON1Q9HCB6 807 aa20.81■□□□□ 0.92
SNHG9-201ENST00000531523 FLT4P35916 1363 aa20.81■□□□□ 0.92
SNHG9-201ENST00000531523 TOGARAM1Q9Y4F4 1720 aa20.81■□□□□ 0.92
SNHG9-201ENST00000531523 SLC15A2Q16348 729 aa20.79■□□□□ 0.92
SNHG9-201ENST00000531523 DDX54Q8TDD1 881 aaKnown RBP20.79■□□□□ 0.92
SNHG9-201ENST00000531523 COL24A1Q17RW2 1714 aa20.78■□□□□ 0.92
SNHG9-201ENST00000531523 HSP90AB2PQ58FF8 381 aa20.78■□□□□ 0.92
SNHG9-201ENST00000531523 USHBP1Q8N6Y0 703 aa20.78■□□□□ 0.92
SNHG9-201ENST00000531523 LRRC4BQ9NT99 713 aa20.78■□□□□ 0.92
SNHG9-201ENST00000531523 SMG6Q86US8 1419 aaKnown RBP20.78■□□□□ 0.92
SNHG9-201ENST00000531523 PTGER2P43116 358 aa20.76■□□□□ 0.91
SNHG9-201ENST00000531523 ZNF827Q17R98 1081 aa20.76■□□□□ 0.91
SNHG9-201ENST00000531523 STK32BQ9NY57 414 aa20.76■□□□□ 0.91
SNHG9-201ENST00000531523 EMILIN1Q9Y6C2 1016 aa20.76■□□□□ 0.91
SNHG9-201ENST00000531523 ZCRB1Q8TBF4 217 aaKnown RBP20.75■□□□□ 0.91
SNHG9-201ENST00000531523 ITGB4P16144 1822 aa20.74■□□□□ 0.91
SNHG9-201ENST00000531523 ZBTB7AO95365 584 aa20.74■□□□□ 0.91
SNHG9-201ENST00000531523 SGIP1Q9BQI5 828 aa20.73■□□□□ 0.91
SNHG9-201ENST00000531523 CGNL1Q0VF96 1302 aa20.73■□□□□ 0.91
SNHG9-201ENST00000531523 HSPA5P11021 654 aaKnown RBP20.72■□□□□ 0.91
SNHG9-201ENST00000531523 PRIM1P49642 420 aaKnown RBP20.71■□□□□ 0.91
SNHG9-201ENST00000531523 AKT1S1Q96B36 256 aa20.71■□□□□ 0.91
SNHG9-201ENST00000531523 TAF1LQ8IZX4 1826 aa20.71■□□□□ 0.91
SNHG9-201ENST00000531523 PPP1R1BQ9UD71 204 aaPredicted RBP20.7■□□□□ 0.9
SNHG9-201ENST00000531523 C5P01031 1676 aa20.7■□□□□ 0.9
SNHG9-201ENST00000531523 EIF4G2P78344 907 aaKnown RBP eCLIP20.68■□□□□ 0.9
SNHG9-201ENST00000531523 SLC27A3Q5K4L6 730 aa20.68■□□□□ 0.9
SNHG9-201ENST00000531523 RAPGEF4Q8WZA2 1011 aa20.68■□□□□ 0.9
SNHG9-201ENST00000531523 MTFR1LQ9H019 292 aa20.68■□□□□ 0.9
SNHG9-201ENST00000531523 ATF5Q9Y2D1 282 aaPredicted RBP20.68■□□□□ 0.9
SNHG9-201ENST00000531523 WASHC2AQ641Q2 1341 aa20.68■□□□□ 0.9
SNHG9-201ENST00000531523 TATP17735 454 aaPredicted RBP20.67■□□□□ 0.9
SNHG9-201ENST00000531523 KCNQ4P56696 695 aa20.67■□□□□ 0.9
SNHG9-201ENST00000531523 CYP27B1O15528 508 aa20.66■□□□□ 0.9
SNHG9-201ENST00000531523 CCER1Q8TC90 406 aaPredicted RBP20.66■□□□□ 0.9
SNHG9-201ENST00000531523 SYTL4Q96C24 671 aaPredicted RBP20.66■□□□□ 0.9
SNHG9-201ENST00000531523 POLKQ9UBT6 870 aa20.66■□□□□ 0.9
SNHG9-201ENST00000531523 PCDH11XQ9BZA7 1347 aa20.66■□□□□ 0.9
SNHG9-201ENST00000531523 PCDH11YQ9BZA8 1340 aa20.66■□□□□ 0.9
SNHG9-201ENST00000531523 PNPLA7Q6ZV29 1317 aa20.64■□□□□ 0.89
SNHG9-201ENST00000531523 POLR3GLQ9BT43 218 aa20.63■□□□□ 0.89
SNHG9-201ENST00000531523 EYA1Q99502 592 aa20.62■□□□□ 0.89
SNHG9-201ENST00000531523 PPM1GO15355 546 aaPredicted RBP20.61■□□□□ 0.89
SNHG9-201ENST00000531523 PANK3Q9H999 370 aa20.61■□□□□ 0.89
SNHG9-201ENST00000531523 FHDC1Q9C0D6 1143 aaPredicted RBP20.6■□□□□ 0.89
SNHG9-201ENST00000531523 MAP3K5Q99683 1374 aa20.59■□□□□ 0.89
SNHG9-201ENST00000531523 C4BP0C0L5 1744 aa20.59■□□□□ 0.89
SNHG9-201ENST00000531523 EIF4A2Q14240 407 aaKnown RBP20.59■□□□□ 0.89
SNHG9-201ENST00000531523 NKX1-1Q15270 411 aaPredicted RBP20.59■□□□□ 0.89
SNHG9-201ENST00000531523 CCNL1Q9UK58 526 aaPredicted RBP20.59■□□□□ 0.89
SNHG9-201ENST00000531523 UBR3Q6ZT12 1888 aa20.58■□□□□ 0.89
SNHG9-201ENST00000531523 PALLDQ8WX93 1383 aa20.58■□□□□ 0.88
SNHG9-201ENST00000531523 TNNT2P45379 298 aaPredicted RBP20.57■□□□□ 0.88
SNHG9-201ENST00000531523 SYT17Q9BSW7 474 aa20.57■□□□□ 0.88
SNHG9-201ENST00000531523 PLEKHG2Q9H7P9 1386 aa20.57■□□□□ 0.88
SNHG9-201ENST00000531523 IGSF1Q8N6C5 1336 aa20.56■□□□□ 0.88
SNHG9-201ENST00000531523 SLC16A10Q8TF71 515 aa20.55■□□□□ 0.88
SNHG9-201ENST00000531523 ARXQ96QS3 562 aa20.55■□□□□ 0.88
SNHG9-201ENST00000531523 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.54■□□□□ 0.88
SNHG9-201ENST00000531523 TFCP2L1Q9NZI6 479 aa20.54■□□□□ 0.88
SNHG9-201ENST00000531523 MPRIPQ6WCQ1 1025 aa20.53■□□□□ 0.88
SNHG9-201ENST00000531523 PIGBQ92521 554 aa20.53■□□□□ 0.88
SNHG9-201ENST00000531523 UTRNP46939 3433 aa20.53■□□□□ 0.88
SNHG9-201ENST00000531523 PHKG2P15735 406 aa20.52■□□□□ 0.88
SNHG9-201ENST00000531523 SPG7Q9UQ90 795 aa20.52■□□□□ 0.88
SNHG9-201ENST00000531523 KIF7Q2M1P5 1343 aa20.52■□□□□ 0.87
SNHG9-201ENST00000531523 CHD4Q14839 1912 aa20.51■□□□□ 0.87
SNHG9-201ENST00000531523 YY1P25490 414 aa20.51■□□□□ 0.87
SNHG9-201ENST00000531523 COL23A1Q86Y22 540 aaPredicted RBP20.51■□□□□ 0.87
SNHG9-201ENST00000531523 ZNF831Q5JPB2 1677 aa20.51■□□□□ 0.87
SNHG9-201ENST00000531523 AMIGO3Q86WK7 504 aa20.5■□□□□ 0.87
SNHG9-201ENST00000531523 AMER1Q5JTC6 1135 aaPredicted RBP20.49■□□□□ 0.87
SNHG9-201ENST00000531523 COL5A3P25940 1745 aaPredicted RBP20.49■□□□□ 0.87
SNHG9-201ENST00000531523 KDM6AO15550 1401 aaPredicted RBP20.48■□□□□ 0.87
SNHG9-201ENST00000531523 IFNL2Q8IZJ0 200 aa20.47■□□□□ 0.87
SNHG9-201ENST00000531523 SMARCC1Q92922 1105 aaPredicted RBP20.47■□□□□ 0.87
SNHG9-201ENST00000531523 KDRP35968 1356 aa20.46■□□□□ 0.87
SNHG9-201ENST00000531523 VIRMAQ69YN4 1812 aaKnown RBP20.46■□□□□ 0.87
SNHG9-201ENST00000531523 SCN11AQ9UI33 1791 aa20.45■□□□□ 0.86
SNHG9-201ENST00000531523 MORC1Q86VD1 984 aa20.45■□□□□ 0.86
SNHG9-201ENST00000531523 AEBP1Q8IUX7 1158 aa20.45■□□□□ 0.86
SNHG9-201ENST00000531523 ASAP1Q9ULH1 1129 aa20.45■□□□□ 0.86
SNHG9-201ENST00000531523 POLD1P28340 1107 aa20.44■□□□□ 0.86
SNHG9-201ENST00000531523 TMOD3Q9NYL9 352 aa20.44■□□□□ 0.86
SNHG9-201ENST00000531523 KNSTRNQ9Y448 316 aa20.44■□□□□ 0.86
SNHG9-201ENST00000531523 CICQ96RK0 1608 aaPredicted RBP20.43■□□□□ 0.86
SNHG9-201ENST00000531523 LOC102724428A0A0B4J2F2 783 aa20.43■□□□□ 0.86
SNHG9-201ENST00000531523 DCAF8L1A6NGE4 600 aa20.43■□□□□ 0.86
SNHG9-201ENST00000531523 PER1O15534 1290 aaPredicted RBP20.43■□□□□ 0.86
SNHG9-201ENST00000531523 SIK1P57059 783 aa20.43■□□□□ 0.86
SNHG9-201ENST00000531523 LINC00116Q8NCU8 138 aa20.43■□□□□ 0.86
SNHG9-201ENST00000531523 ITPK1Q13572 414 aa20.42■□□□□ 0.86
SNHG9-201ENST00000531523 MSL1Q68DK7 614 aa20.42■□□□□ 0.86
SNHG9-201ENST00000531523 SMIM5Q71RC9 77 aa20.42■□□□□ 0.86
SNHG9-201ENST00000531523 NLGN2Q8NFZ4 835 aa20.42■□□□□ 0.86
SNHG9-201ENST00000531523 ATG3Q9NT62 314 aa20.42■□□□□ 0.86
SNHG9-201ENST00000531523 IL13P35225 146 aa20.41■□□□□ 0.86
SNHG9-201ENST00000531523 GOLGB1Q14789 3259 aaKnown RBP20.4■□□□□ 0.86
SNHG9-201ENST00000531523 TJP1Q07157 1748 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 190.5 ms