RNA–Protein interactions for RNA: ENST00000531516.1

C11orf54-210, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3

Gene C11orf54, Length 168 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-210ENST00000531516 SRCAPQ6ZRS2 3230 aa17.15■□□□□ 0.34
C11orf54-210ENST00000531516 POLKQ9UBT6 870 aa17.15■□□□□ 0.34
C11orf54-210ENST00000531516 PPP1R1BQ9UD71 204 aaPredicted RBP17.15■□□□□ 0.34
C11orf54-210ENST00000531516 SPG7Q9UQ90 795 aa17.15■□□□□ 0.34
C11orf54-210ENST00000531516 SPON1Q9HCB6 807 aa17.14■□□□□ 0.33
C11orf54-210ENST00000531516 PRIM1P49642 420 aaKnown RBP17.13■□□□□ 0.33
C11orf54-210ENST00000531516 KIF7Q2M1P5 1343 aa17.13■□□□□ 0.33
C11orf54-210ENST00000531516 MEGF6O75095 1541 aa17.12■□□□□ 0.33
C11orf54-210ENST00000531516 SLC27A3Q5K4L6 730 aa17.12■□□□□ 0.33
C11orf54-210ENST00000531516 PROM2Q8N271 834 aa17.12■□□□□ 0.33
C11orf54-210ENST00000531516 RGPD3A6NKT7 1758 aaPredicted RBP17.11■□□□□ 0.33
C11orf54-210ENST00000531516 RGPD4Q7Z3J3 1758 aa17.11■□□□□ 0.33
C11orf54-210ENST00000531516 SLC15A2Q16348 729 aa17.11■□□□□ 0.33
C11orf54-210ENST00000531516 RREB1Q92766 1687 aa17.1■□□□□ 0.33
C11orf54-210ENST00000531516 EYA1Q99502 592 aa17.1■□□□□ 0.33
C11orf54-210ENST00000531516 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.1■□□□□ 0.33
C11orf54-210ENST00000531516 DCAF8L1A6NGE4 600 aa17.09■□□□□ 0.33
C11orf54-210ENST00000531516 LRP5O75197 1615 aa17.09■□□□□ 0.33
C11orf54-210ENST00000531516 NHSQ6T4R5 1651 aa17.09■□□□□ 0.33
C11orf54-210ENST00000531516 SBF2Q86WG5 1849 aa17.08■□□□□ 0.33
C11orf54-210ENST00000531516 EIF4A2Q14240 407 aaKnown RBP17.08■□□□□ 0.32
C11orf54-210ENST00000531516 ANO8Q9HCE9 1232 aaPredicted RBP17.08■□□□□ 0.32
C11orf54-210ENST00000531516 NUP188Q5SRE5 1749 aa17.07■□□□□ 0.32
C11orf54-210ENST00000531516 IFNL2Q8IZJ0 200 aa17.06■□□□□ 0.32
C11orf54-210ENST00000531516 SMARCC1Q92922 1105 aaPredicted RBP17.06■□□□□ 0.32
C11orf54-210ENST00000531516 PLEKHG2Q9H7P9 1386 aa17.05■□□□□ 0.32
C11orf54-210ENST00000531516 PLEKHO1Q53GL0 409 aaPredicted RBP17.05■□□□□ 0.32
C11orf54-210ENST00000531516 MPRIPQ6WCQ1 1025 aa17.05■□□□□ 0.32
C11orf54-210ENST00000531516 CCNL1Q9UK58 526 aaPredicted RBP17.05■□□□□ 0.32
C11orf54-210ENST00000531516 CYP27B1O15528 508 aa17.04■□□□□ 0.32
C11orf54-210ENST00000531516 HSP90AB1P08238 724 aaKnown RBP17.04■□□□□ 0.32
C11orf54-210ENST00000531516 AMOTQ4VCS5 1084 aa17.04■□□□□ 0.32
C11orf54-210ENST00000531516 AMER1Q5JTC6 1135 aaPredicted RBP17.04■□□□□ 0.32
C11orf54-210ENST00000531516 TFCP2L1Q9NZI6 479 aa17.03■□□□□ 0.32
C11orf54-210ENST00000531516 IGSF1Q8N6C5 1336 aa17.02■□□□□ 0.32
C11orf54-210ENST00000531516 ZBTB7AO95365 584 aa17.02■□□□□ 0.32
C11orf54-210ENST00000531516 NKX1-1Q15270 411 aaPredicted RBP17.02■□□□□ 0.32
C11orf54-210ENST00000531516 CC2D1BQ5T0F9 858 aaKnown RBP17.02■□□□□ 0.32
C11orf54-210ENST00000531516 MTFR1LQ9H019 292 aa17.02■□□□□ 0.32
C11orf54-210ENST00000531516 TMOD3Q9NYL9 352 aa17.02■□□□□ 0.32
C11orf54-210ENST00000531516 NCAPD2Q15021 1401 aa17.02■□□□□ 0.31
C11orf54-210ENST00000531516 ANKRD26Q9UPS8 1709 aa17.01■□□□□ 0.31
C11orf54-210ENST00000531516 C1orf141Q5JVX7 400 aa17■□□□□ 0.31
C11orf54-210ENST00000531516 SLC16A10Q8TF71 515 aa17■□□□□ 0.31
C11orf54-210ENST00000531516 LRRC4BQ9NT99 713 aa17■□□□□ 0.31
C11orf54-210ENST00000531516 ATF5Q9Y2D1 282 aaPredicted RBP17■□□□□ 0.31
C11orf54-210ENST00000531516 RGPD2P0DJD1 1756 aa17■□□□□ 0.31
C11orf54-210ENST00000531516 PHKG2P15735 406 aa16.99■□□□□ 0.31
C11orf54-210ENST00000531516 MTHFSP49914 203 aa16.99■□□□□ 0.31
C11orf54-210ENST00000531516 KAT6BQ8WYB5 2073 aa16.99■□□□□ 0.31
C11orf54-210ENST00000531516 BTAF1O14981 1849 aa16.98■□□□□ 0.31
C11orf54-210ENST00000531516 MAP2P11137 1827 aaKnown RBP16.98■□□□□ 0.31
C11orf54-210ENST00000531516 PER1O15534 1290 aaPredicted RBP16.98■□□□□ 0.31
C11orf54-210ENST00000531516 MSH5O43196 834 aa16.98■□□□□ 0.31
C11orf54-210ENST00000531516 POLD1P28340 1107 aa16.98■□□□□ 0.31
C11orf54-210ENST00000531516 SULT6B1Q6IMI4 303 aa16.98■□□□□ 0.31
C11orf54-210ENST00000531516 ZNF530Q6P9A1 599 aaPredicted RBP16.98■□□□□ 0.31
C11orf54-210ENST00000531516 DCAF5Q96JK2 942 aa16.98■□□□□ 0.31
C11orf54-210ENST00000531516 PALLDQ8WX93 1383 aa16.98■□□□□ 0.31
C11orf54-210ENST00000531516 CNGB1Q14028 1251 aaPredicted RBP16.97■□□□□ 0.31
C11orf54-210ENST00000531516 ZNF827Q17R98 1081 aa16.97■□□□□ 0.31
C11orf54-210ENST00000531516 FLAD1Q8NFF5 587 aa16.97■□□□□ 0.31
C11orf54-210ENST00000531516 AKT1S1Q96B36 256 aa16.97■□□□□ 0.31
C11orf54-210ENST00000531516 NPC1L1Q9UHC9 1359 aa16.97■□□□□ 0.31
C11orf54-210ENST00000531516 DIAPH1O60610 1272 aaKnown RBP16.96■□□□□ 0.31
C11orf54-210ENST00000531516 PIGBQ92521 554 aa16.96■□□□□ 0.31
C11orf54-210ENST00000531516 DOT1LQ8TEK3 1739 aa16.96■□□□□ 0.3
C11orf54-210ENST00000531516 ERVV-2B6SEH9 535 aa16.95■□□□□ 0.3
C11orf54-210ENST00000531516 IL13P35225 146 aa16.95■□□□□ 0.3
C11orf54-210ENST00000531516 KCNQ4P56696 695 aa16.95■□□□□ 0.3
C11orf54-210ENST00000531516 AK7Q96M32 723 aa16.95■□□□□ 0.3
C11orf54-210ENST00000531516 CFAP53Q96M91 514 aa16.95■□□□□ 0.3
C11orf54-210ENST00000531516 PDGFDQ9GZP0 370 aaPredicted RBP16.95■□□□□ 0.3
C11orf54-210ENST00000531516 CABP4P57796 275 aa16.94■□□□□ 0.3
C11orf54-210ENST00000531516 AEBP1Q8IUX7 1158 aa16.92■□□□□ 0.3
C11orf54-210ENST00000531516 ARXQ96QS3 562 aa16.92■□□□□ 0.3
C11orf54-210ENST00000531516 PKD1L3Q7Z443 1732 aa16.92■□□□□ 0.3
C11orf54-210ENST00000531516 SHANK3Q9BYB0 1731 aa16.92■□□□□ 0.3
C11orf54-210ENST00000531516 LOC102724428A0A0B4J2F2 783 aa16.91■□□□□ 0.3
C11orf54-210ENST00000531516 PTGER2P43116 358 aa16.91■□□□□ 0.3
C11orf54-210ENST00000531516 SIK1P57059 783 aa16.91■□□□□ 0.3
C11orf54-210ENST00000531516 NUDCQ9Y266 331 aa16.91■□□□□ 0.3
C11orf54-210ENST00000531516 PNPLA7Q6ZV29 1317 aa16.91■□□□□ 0.3
C11orf54-210ENST00000531516 KDRP35968 1356 aa16.9■□□□□ 0.3
C11orf54-210ENST00000531516 U2SURPO15042 1029 aaKnown RBP16.9■□□□□ 0.3
C11orf54-210ENST00000531516 ATP6V1AP38606 617 aa16.9■□□□□ 0.3
C11orf54-210ENST00000531516 PAPPAQ13219 1627 aa16.89■□□□□ 0.29
C11orf54-210ENST00000531516 HMOX1P09601 288 aa16.89■□□□□ 0.29
C11orf54-210ENST00000531516 AKAP4Q5JQC9 854 aa16.89■□□□□ 0.29
C11orf54-210ENST00000531516 ASAP1Q9ULH1 1129 aa16.89■□□□□ 0.29
C11orf54-210ENST00000531516 CASZ1Q86V15 1759 aa16.89■□□□□ 0.29
C11orf54-210ENST00000531516 KLHL34Q8N239 644 aa16.88■□□□□ 0.29
C11orf54-210ENST00000531516 RBM42Q9BTD8 480 aaKnown RBP16.88■□□□□ 0.29
C11orf54-210ENST00000531516 FHDC1Q9C0D6 1143 aaPredicted RBP16.88■□□□□ 0.29
C11orf54-210ENST00000531516 ATG3Q9NT62 314 aa16.87■□□□□ 0.29
C11orf54-210ENST00000531516 COL23A1Q86Y22 540 aaPredicted RBP16.86■□□□□ 0.29
C11orf54-210ENST00000531516 SYT17Q9BSW7 474 aa16.86■□□□□ 0.29
C11orf54-210ENST00000531516 SSFA2P28290 1259 aa16.85■□□□□ 0.29
C11orf54-210ENST00000531516 SGIP1Q9BQI5 828 aa16.85■□□□□ 0.29
C11orf54-210ENST00000531516 LY75O60449 1722 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms