RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 GJD4Q96KN9 370 aaPredicted RBP9.35□□□□□ -0.91
USP47-211ENST00000531513 GIGYF1O75420 1035 aaPredicted RBP9.34□□□□□ -0.91
USP47-211ENST00000531513 GDF11O95390 407 aa9.34□□□□□ -0.91
USP47-211ENST00000531513 RNF225M0QZC1 329 aaPredicted RBP9.33□□□□□ -0.92
USP47-211ENST00000531513 PRICKLE2Q7Z3G6 844 aa9.33□□□□□ -0.92
USP47-211ENST00000531513 ATP5J2-PTCD1G3V325 749 aa9.32□□□□□ -0.92
USP47-211ENST00000531513 RHOQP17081 205 aa9.32□□□□□ -0.92
USP47-211ENST00000531513 RNF144AP50876 292 aaPredicted RBP9.32□□□□□ -0.92
USP47-211ENST00000531513 GAS6Q14393 721 aa9.32□□□□□ -0.92
USP47-211ENST00000531513 ARHGEF15O94989 841 aa9.31□□□□□ -0.92
USP47-211ENST00000531513 NEUROD2Q15784 382 aa9.31□□□□□ -0.92
USP47-211ENST00000531513 MEN1O00255 615 aa9.3□□□□□ -0.92
USP47-211ENST00000531513 ADAMTS2O95450 1211 aa9.3□□□□□ -0.92
USP47-211ENST00000531513 ERVK-9P63128 1117 aa9.29□□□□□ -0.92
USP47-211ENST00000531513 IL27Q8NEV9 243 aa9.29□□□□□ -0.92
USP47-211ENST00000531513 TRIM52Q96A61 297 aa9.29□□□□□ -0.92
USP47-211ENST00000531513 ZNF837Q96EG3 531 aaPredicted RBP9.29□□□□□ -0.92
USP47-211ENST00000531513 A0A1W2PRU2 124 aa9.28□□□□□ -0.92
USP47-211ENST00000531513 CC2D2BQ6DHV5 1058 aa9.28□□□□□ -0.92
USP47-211ENST00000531513 GPR37L1O60883 481 aa9.27□□□□□ -0.93
USP47-211ENST00000531513 GPC1P35052 558 aa9.27□□□□□ -0.93
USP47-211ENST00000531513 SCTRP47872 440 aa9.27□□□□□ -0.93
USP47-211ENST00000531513 SRSF11Q05519 484 aaKnown RBP9.27□□□□□ -0.93
USP47-211ENST00000531513 LYPD4Q6UWN0 246 aa9.27□□□□□ -0.93
USP47-211ENST00000531513 NR1H3Q13133 447 aa9.26□□□□□ -0.93
USP47-211ENST00000531513 CCDC125Q86Z20 511 aa9.26□□□□□ -0.93
USP47-211ENST00000531513 TRIM22Q8IYM9 498 aa9.26□□□□□ -0.93
USP47-211ENST00000531513 GPR25O00155 361 aa9.25□□□□□ -0.93
USP47-211ENST00000531513 IRS1P35568 1242 aa9.25□□□□□ -0.93
USP47-211ENST00000531513 RNF20Q5VTR2 975 aa9.25□□□□□ -0.93
USP47-211ENST00000531513 RIPOR1Q6ZS17 1223 aa9.25□□□□□ -0.93
USP47-211ENST00000531513 MARSP56192 900 aaKnown RBP9.24□□□□□ -0.93
USP47-211ENST00000531513 CYP2U1Q7Z449 544 aa9.24□□□□□ -0.93
USP47-211ENST00000531513 PCDHB11Q9Y5F2 797 aa9.24□□□□□ -0.93
USP47-211ENST00000531513 CELA2BP08218 269 aaPredicted RBP9.23□□□□□ -0.93
USP47-211ENST00000531513 MAP3K10Q02779 954 aa9.23□□□□□ -0.93
USP47-211ENST00000531513 POU4F2Q12837 409 aa9.23□□□□□ -0.93
USP47-211ENST00000531513 CLN3Q13286 438 aa9.23□□□□□ -0.93
USP47-211ENST00000531513 DBN1Q16643 649 aa9.23□□□□□ -0.93
USP47-211ENST00000531513 SLC27A3Q5K4L6 730 aa9.23□□□□□ -0.93
USP47-211ENST00000531513 MTMR14Q8NCE2 650 aa9.23□□□□□ -0.93
USP47-211ENST00000531513 GMCL1Q96IK5 515 aa9.23□□□□□ -0.93
USP47-211ENST00000531513 NLRP3Q96P20 1036 aa9.23□□□□□ -0.93
USP47-211ENST00000531513 DYRK1BQ9Y463 629 aa9.23□□□□□ -0.93
USP47-211ENST00000531513 OSBPL3Q9H4L5 887 aa9.22□□□□□ -0.93
USP47-211ENST00000531513 ARHGEF10LQ9HCE6 1279 aa9.22□□□□□ -0.93
USP47-211ENST00000531513 MBIPQ9NS73 344 aa9.22□□□□□ -0.93
USP47-211ENST00000531513 TRAK2O60296 914 aa9.21□□□□□ -0.94
USP47-211ENST00000531513 BRPF1P55201 1214 aaPredicted RBP9.21□□□□□ -0.94
USP47-211ENST00000531513 MCCD1P59942 119 aaPredicted RBP9.21□□□□□ -0.94
USP47-211ENST00000531513 NBPF10Q6P3W6 841 aaKnown RBP9.21□□□□□ -0.94
USP47-211ENST00000531513 NBPF15Q8N660 670 aa9.21□□□□□ -0.94
USP47-211ENST00000531513 BANK1Q8NDB2 785 aa9.21□□□□□ -0.94
USP47-211ENST00000531513 ZNF592Q92610 1267 aa9.21□□□□□ -0.94
USP47-211ENST00000531513 GTPBP3Q969Y2 492 aaKnown RBP9.21□□□□□ -0.94
USP47-211ENST00000531513 GAS2L1Q99501 681 aaPredicted RBP9.21□□□□□ -0.94
USP47-211ENST00000531513 GRIP2Q9C0E4 1043 aa9.21□□□□□ -0.94
USP47-211ENST00000531513 DNMT3AQ9Y6K1 912 aaPredicted RBP9.21□□□□□ -0.94
USP47-211ENST00000531513 NDUFB9Q9Y6M9 179 aa9.21□□□□□ -0.94
USP47-211ENST00000531513 SOCS7O14512 581 aa9.2□□□□□ -0.94
USP47-211ENST00000531513 FOXR1Q6PIV2 292 aa9.2□□□□□ -0.94
USP47-211ENST00000531513 SCARF2Q96GP6 870 aaPredicted RBP9.2□□□□□ -0.94
USP47-211ENST00000531513 ZNF330Q9Y3S2 320 aaPredicted RBP9.2□□□□□ -0.94
USP47-211ENST00000531513 IGF1RP08069 1367 aa9.2□□□□□ -0.94
USP47-211ENST00000531513 GPAT2Q6NUI2 795 aa9.19□□□□□ -0.94
USP47-211ENST00000531513 KANK3Q6NY19 840 aa9.19□□□□□ -0.94
USP47-211ENST00000531513 RAB6BQ9NRW1 208 aa9.19□□□□□ -0.94
USP47-211ENST00000531513 SPATA31C2B4DYI2 1134 aa9.18□□□□□ -0.94
USP47-211ENST00000531513 H7C1W4 665 aa9.18□□□□□ -0.94
USP47-211ENST00000531513 IGHA1P01876 353 aa9.18□□□□□ -0.94
USP47-211ENST00000531513 SNRKQ9NRH2 765 aa9.18□□□□□ -0.94
USP47-211ENST00000531513 WASLO00401 505 aaPredicted RBP9.17□□□□□ -0.94
USP47-211ENST00000531513 TAS1R3Q7RTX0 852 aa9.16□□□□□ -0.94
USP47-211ENST00000531513 TRERF1Q96PN7 1200 aa9.16□□□□□ -0.94
USP47-211ENST00000531513 ESF1Q9H501 851 aaKnown RBP9.16□□□□□ -0.94
USP47-211ENST00000531513 TIMMDC1Q9NPL8 285 aa9.16□□□□□ -0.94
USP47-211ENST00000531513 ENAMQ9NRM1 1142 aa9.16□□□□□ -0.94
USP47-211ENST00000531513 IL2RAP01589 272 aa9.15□□□□□ -0.94
USP47-211ENST00000531513 WDR44Q5JSH3 913 aa9.15□□□□□ -0.94
USP47-211ENST00000531513 ACDQ96AP0 544 aa9.15□□□□□ -0.94
USP47-211ENST00000531513 CCDC85AQ96PX6 553 aaPredicted RBP9.15□□□□□ -0.94
USP47-211ENST00000531513 APBB1O00213 710 aa9.14□□□□□ -0.95
USP47-211ENST00000531513 GNRH1P01148 92 aa9.14□□□□□ -0.95
USP47-211ENST00000531513 BCRP11274 1271 aa9.14□□□□□ -0.95
USP47-211ENST00000531513 CNKSR1Q969H4 720 aa9.14□□□□□ -0.95
USP47-211ENST00000531513 CDCA7Q9BWT1 371 aaPredicted RBP9.14□□□□□ -0.95
USP47-211ENST00000531513 NUCKS1Q9H1E3 243 aaKnown RBP9.14□□□□□ -0.95
USP47-211ENST00000531513 F11P03951 625 aa9.13□□□□□ -0.95
USP47-211ENST00000531513 THBS1P07996 1170 aa9.13□□□□□ -0.95
USP47-211ENST00000531513 XP32Q5T750 250 aa9.13□□□□□ -0.95
USP47-211ENST00000531513 ESYT1Q9BSJ8 1104 aa9.13□□□□□ -0.95
USP47-211ENST00000531513 CEP126Q9P2H0 1117 aa9.13□□□□□ -0.95
USP47-211ENST00000531513 MX2P20592 715 aa9.12□□□□□ -0.95
USP47-211ENST00000531513 FOXK2Q01167 660 aa9.12□□□□□ -0.95
USP47-211ENST00000531513 CENPCQ03188 943 aa9.12□□□□□ -0.95
USP47-211ENST00000531513 GPAMQ9HCL2 828 aa9.12□□□□□ -0.95
USP47-211ENST00000531513 CNTNAP5Q8WYK1 1306 aa9.11□□□□□ -0.95
USP47-211ENST00000531513 MYCP01106 439 aaPredicted RBP9.11□□□□□ -0.95
USP47-211ENST00000531513 PHKA2P46019 1235 aa9.11□□□□□ -0.95
USP47-211ENST00000531513 NEDD1Q8NHV4 660 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms