RNA–Protein interactions for RNA: ENST00000531478.5

ABCA7-215, Transcript of ATP binding cassette subfamily A member 7, humanhuman

TSL 3

Gene ABCA7, Length 725 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA7-215ENST00000531478 NBPF4Q96M43 638 aa27.29■■□□□ 1.96
ABCA7-215ENST00000531478 NUP188Q5SRE5 1749 aa27.28■■□□□ 1.96
ABCA7-215ENST00000531478 DDX54Q8TDD1 881 aaKnown RBP27.28■■□□□ 1.96
ABCA7-215ENST00000531478 RGPD3A6NKT7 1758 aaPredicted RBP27.27■■□□□ 1.96
ABCA7-215ENST00000531478 RGPD4Q7Z3J3 1758 aa27.27■■□□□ 1.96
ABCA7-215ENST00000531478 RAPGEF4Q8WZA2 1011 aa27.26■■□□□ 1.95
ABCA7-215ENST00000531478 ACSBG1Q96GR2 724 aa27.26■■□□□ 1.95
ABCA7-215ENST00000531478 PTF1AQ7RTS3 328 aa27.25■■□□□ 1.95
ABCA7-215ENST00000531478 USHBP1Q8N6Y0 703 aa27.25■■□□□ 1.95
ABCA7-215ENST00000531478 NHSQ6T4R5 1651 aa27.24■■□□□ 1.95
ABCA7-215ENST00000531478 MTHFSP49914 203 aa27.24■■□□□ 1.95
ABCA7-215ENST00000531478 ZCRB1Q8TBF4 217 aaKnown RBP27.24■■□□□ 1.95
ABCA7-215ENST00000531478 ZNF316A6NFI3 1004 aaPredicted RBP27.22■■□□□ 1.95
ABCA7-215ENST00000531478 KCNQ2O43526 872 aa27.22■■□□□ 1.95
ABCA7-215ENST00000531478 TATP17735 454 aaPredicted RBP27.22■■□□□ 1.95
ABCA7-215ENST00000531478 EIF4A2Q14240 407 aaKnown RBP27.22■■□□□ 1.95
ABCA7-215ENST00000531478 EYA1Q99502 592 aa27.2■■□□□ 1.94
ABCA7-215ENST00000531478 MEGF6O75095 1541 aa27.19■■□□□ 1.94
ABCA7-215ENST00000531478 BTAF1O14981 1849 aa27.17■■□□□ 1.94
ABCA7-215ENST00000531478 LRP5O75197 1615 aa27.16■■□□□ 1.94
ABCA7-215ENST00000531478 TXNRD1Q16881 649 aa27.16■■□□□ 1.94
ABCA7-215ENST00000531478 SYTL4Q96C24 671 aaPredicted RBP27.16■■□□□ 1.94
ABCA7-215ENST00000531478 PPP2R1AP30153 589 aa27.14■■□□□ 1.94
ABCA7-215ENST00000531478 SHANK3Q9BYB0 1731 aa27.13■■□□□ 1.93
ABCA7-215ENST00000531478 IL13P35225 146 aa27.12■■□□□ 1.93
ABCA7-215ENST00000531478 PCDH11XQ9BZA7 1347 aa27.12■■□□□ 1.93
ABCA7-215ENST00000531478 PCDH11YQ9BZA8 1340 aa27.12■■□□□ 1.93
ABCA7-215ENST00000531478 DOT1LQ8TEK3 1739 aa27.11■■□□□ 1.93
ABCA7-215ENST00000531478 PROM2Q8N271 834 aa27.11■■□□□ 1.93
ABCA7-215ENST00000531478 STK32BQ9NY57 414 aa27.11■■□□□ 1.93
ABCA7-215ENST00000531478 PRIM1P49642 420 aaKnown RBP27.09■■□□□ 1.93
ABCA7-215ENST00000531478 SPG7Q9UQ90 795 aa27.07■■□□□ 1.92
ABCA7-215ENST00000531478 IGSF1Q8N6C5 1336 aa27.07■■□□□ 1.92
ABCA7-215ENST00000531478 NCAPD2Q15021 1401 aa27.07■■□□□ 1.92
ABCA7-215ENST00000531478 DIAPH1O60610 1272 aaKnown RBP27.06■■□□□ 1.92
ABCA7-215ENST00000531478 AEBP1Q8IUX7 1158 aa27.05■■□□□ 1.92
ABCA7-215ENST00000531478 ANO8Q9HCE9 1232 aaPredicted RBP27.05■■□□□ 1.92
ABCA7-215ENST00000531478 SULT6B1Q6IMI4 303 aa27.03■■□□□ 1.92
ABCA7-215ENST00000531478 PKD1L3Q7Z443 1732 aa27.02■■□□□ 1.92
ABCA7-215ENST00000531478 SLC15A2Q16348 729 aa27.02■■□□□ 1.92
ABCA7-215ENST00000531478 SPON1Q9HCB6 807 aa27.02■■□□□ 1.92
ABCA7-215ENST00000531478 RALBP1Q15311 655 aa27.01■■□□□ 1.91
ABCA7-215ENST00000531478 CFAP53Q96M91 514 aa27.01■■□□□ 1.91
ABCA7-215ENST00000531478 SLC27A3Q5K4L6 730 aa27■■□□□ 1.91
ABCA7-215ENST00000531478 COL3A1P02461 1466 aaPredicted RBP27■■□□□ 1.91
ABCA7-215ENST00000531478 CYP27B1O15528 508 aa26.99■■□□□ 1.91
ABCA7-215ENST00000531478 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.99■■□□□ 1.91
ABCA7-215ENST00000531478 PPP1R1BQ9UD71 204 aaPredicted RBP26.99■■□□□ 1.91
ABCA7-215ENST00000531478 HMOX1P09601 288 aa26.98■■□□□ 1.91
ABCA7-215ENST00000531478 U2SURPO15042 1029 aaKnown RBP26.97■■□□□ 1.91
ABCA7-215ENST00000531478 MPRIPQ6WCQ1 1025 aa26.96■■□□□ 1.91
ABCA7-215ENST00000531478 ITGB4P16144 1822 aa26.95■■□□□ 1.91
ABCA7-215ENST00000531478 LY75O60449 1722 aa26.95■■□□□ 1.9
ABCA7-215ENST00000531478 CASZ1Q86V15 1759 aa26.94■■□□□ 1.9
ABCA7-215ENST00000531478 IFNL2Q8IZJ0 200 aa26.94■■□□□ 1.9
ABCA7-215ENST00000531478 PRKRIP1Q9H875 184 aaPredicted RBP26.94■■□□□ 1.9
ABCA7-215ENST00000531478 LRRC4BQ9NT99 713 aa26.94■■□□□ 1.9
ABCA7-215ENST00000531478 KDRP35968 1356 aa26.94■■□□□ 1.9
ABCA7-215ENST00000531478 CCNL1Q9UK58 526 aaPredicted RBP26.93■■□□□ 1.9
ABCA7-215ENST00000531478 PAPPAQ13219 1627 aa26.92■■□□□ 1.9
ABCA7-215ENST00000531478 HMGB2P26583 209 aaKnown RBP26.92■■□□□ 1.9
ABCA7-215ENST00000531478 PLEKHO1Q53GL0 409 aaPredicted RBP26.92■■□□□ 1.9
ABCA7-215ENST00000531478 ZBTB7AO95365 584 aa26.91■■□□□ 1.9
ABCA7-215ENST00000531478 PLEKHG2Q9H7P9 1386 aa26.91■■□□□ 1.9
ABCA7-215ENST00000531478 KCNQ4P56696 695 aa26.9■■□□□ 1.9
ABCA7-215ENST00000531478 NKX1-1Q15270 411 aaPredicted RBP26.9■■□□□ 1.9
ABCA7-215ENST00000531478 NUDCQ9Y266 331 aa26.9■■□□□ 1.9
ABCA7-215ENST00000531478 MYBBP1AQ9BQG0 1328 aaKnown RBP26.9■■□□□ 1.9
ABCA7-215ENST00000531478 PHKG2P15735 406 aa26.89■■□□□ 1.9
ABCA7-215ENST00000531478 SMARCC1Q92922 1105 aaPredicted RBP26.89■■□□□ 1.9
ABCA7-215ENST00000531478 PDGFDQ9GZP0 370 aaPredicted RBP26.89■■□□□ 1.9
ABCA7-215ENST00000531478 TOGARAM1Q9Y4F4 1720 aa26.89■■□□□ 1.9
ABCA7-215ENST00000531478 ZNF827Q17R98 1081 aa26.88■■□□□ 1.89
ABCA7-215ENST00000531478 AMOTQ4VCS5 1084 aa26.88■■□□□ 1.89
ABCA7-215ENST00000531478 TMOD3Q9NYL9 352 aa26.88■■□□□ 1.89
ABCA7-215ENST00000531478 TFCP2L1Q9NZI6 479 aa26.88■■□□□ 1.89
ABCA7-215ENST00000531478 ATF5Q9Y2D1 282 aaPredicted RBP26.88■■□□□ 1.89
ABCA7-215ENST00000531478 U2AF1L5P0DN76 240 aaPredicted RBP26.87■■□□□ 1.89
ABCA7-215ENST00000531478 U2AF1Q01081 240 aaKnown RBP eCLIP26.87■■□□□ 1.89
ABCA7-215ENST00000531478 HSP90AB1P08238 724 aaKnown RBP26.86■■□□□ 1.89
ABCA7-215ENST00000531478 ZNF530Q6P9A1 599 aaPredicted RBP26.86■■□□□ 1.89
ABCA7-215ENST00000531478 PALLDQ8WX93 1383 aa26.85■■□□□ 1.89
ABCA7-215ENST00000531478 AKT1S1Q96B36 256 aa26.85■■□□□ 1.89
ABCA7-215ENST00000531478 MTFR1LQ9H019 292 aa26.85■■□□□ 1.89
ABCA7-215ENST00000531478 C1orf141Q5JVX7 400 aa26.84■■□□□ 1.89
ABCA7-215ENST00000531478 QSER1Q2KHR3 1735 aa26.83■■□□□ 1.89
ABCA7-215ENST00000531478 PIGBQ92521 554 aa26.83■■□□□ 1.89
ABCA7-215ENST00000531478 RSPH6AQ9H0K4 717 aa26.82■■□□□ 1.88
ABCA7-215ENST00000531478 MTHFSDQ2M296 383 aaKnown RBP26.81■■□□□ 1.88
ABCA7-215ENST00000531478 DCAF5Q96JK2 942 aa26.81■■□□□ 1.88
ABCA7-215ENST00000531478 C5P01031 1676 aa26.81■■□□□ 1.88
ABCA7-215ENST00000531478 SRCAPQ6ZRS2 3230 aa26.8■■□□□ 1.88
ABCA7-215ENST00000531478 PRKAR2BP31323 418 aa26.8■■□□□ 1.88
ABCA7-215ENST00000531478 PHACTR3Q96KR7 559 aa26.8■■□□□ 1.88
ABCA7-215ENST00000531478 DCAF8L1A6NGE4 600 aa26.79■■□□□ 1.88
ABCA7-215ENST00000531478 MSH5O43196 834 aa26.79■■□□□ 1.88
ABCA7-215ENST00000531478 TAF1LQ8IZX4 1826 aa26.79■■□□□ 1.88
ABCA7-215ENST00000531478 TUBGCP6Q96RT7 1819 aa26.79■■□□□ 1.88
ABCA7-215ENST00000531478 ERVV-2B6SEH9 535 aa26.78■■□□□ 1.88
ABCA7-215ENST00000531478 FCHSD2O94868 740 aa26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms