RNA–Protein interactions for RNA: ENST00000531467.5

ABCA7-214, Transcript of ATP binding cassette subfamily A member 7, human

TSL 5

Gene ABCA7, Length 569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Exosome, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA7-214	ENST00000531467	NLGN2	Q8NFZ4	835 aa		18.53	■□□□□ 0.56
ABCA7-214	ENST00000531467	SYTL4	Q96C24	671 aa	Predicted RBP	18.53	■□□□□ 0.56
ABCA7-214	ENST00000531467		A0A1W2PP64	1363 aa		18.53	■□□□□ 0.56
ABCA7-214	ENST00000531467	TMF1	P82094	1093 aa		18.52	■□□□□ 0.56
ABCA7-214	ENST00000531467	LTN1	O94822	1766 aa		18.52	■□□□□ 0.55
ABCA7-214	ENST00000531467	EDC4	Q6P2E9	1401 aa	Known RBP	18.51	■□□□□ 0.55
ABCA7-214	ENST00000531467	PRIM1	P49642	420 aa	Known RBP	18.51	■□□□□ 0.55
ABCA7-214	ENST00000531467	LTV1	Q96GA3	475 aa	Predicted RBP	18.5	■□□□□ 0.55
ABCA7-214	ENST00000531467	QSER1	Q2KHR3	1735 aa		18.49	■□□□□ 0.55
ABCA7-214	ENST00000531467	IP6K1	Q92551	441 aa		18.49	■□□□□ 0.55
ABCA7-214	ENST00000531467	USP54	Q70EL1	1684 aa		18.49	■□□□□ 0.55
ABCA7-214	ENST00000531467	MSH5	O43196	834 aa		18.48	■□□□□ 0.55
ABCA7-214	ENST00000531467	GRIN3B	O60391	1043 aa		18.48	■□□□□ 0.55
ABCA7-214	ENST00000531467	YBX3	P16989	372 aa	Known RBP eCLIP	18.48	■□□□□ 0.55
ABCA7-214	ENST00000531467	COL24A1	Q17RW2	1714 aa		18.48	■□□□□ 0.55
ABCA7-214	ENST00000531467	SHANK3	Q9BYB0	1731 aa		18.47	■□□□□ 0.55
ABCA7-214	ENST00000531467	CDCA8	Q53HL2	280 aa		18.47	■□□□□ 0.55
ABCA7-214	ENST00000531467	CEP350	Q5VT06	3117 aa		18.47	■□□□□ 0.55
ABCA7-214	ENST00000531467	ANKRD36B	Q8N2N9	1353 aa		18.46	■□□□□ 0.55
ABCA7-214	ENST00000531467	TUBGCP6	Q96RT7	1819 aa		18.45	■□□□□ 0.54
ABCA7-214	ENST00000531467	CCNL1	Q9UK58	526 aa	Predicted RBP	18.45	■□□□□ 0.54
ABCA7-214	ENST00000531467	COL23A1	Q86Y22	540 aa	Predicted RBP	18.44	■□□□□ 0.54
ABCA7-214	ENST00000531467	ZCRB1	Q8TBF4	217 aa	Known RBP	18.44	■□□□□ 0.54
ABCA7-214	ENST00000531467	NSD2	O96028	1365 aa		18.43	■□□□□ 0.54
ABCA7-214	ENST00000531467	MSL1	Q68DK7	614 aa		18.42	■□□□□ 0.54
ABCA7-214	ENST00000531467	LY75	O60449	1722 aa		18.41	■□□□□ 0.54
ABCA7-214	ENST00000531467	DOT1L	Q8TEK3	1739 aa		18.41	■□□□□ 0.54
ABCA7-214	ENST00000531467	HOXC9	P31274	260 aa		18.4	■□□□□ 0.54
ABCA7-214	ENST00000531467	FAM208A	Q9UK61	1670 aa	Known RBP	18.4	■□□□□ 0.54
ABCA7-214	ENST00000531467	ATP10D	Q9P241	1426 aa		18.4	■□□□□ 0.54
ABCA7-214	ENST00000531467	FBLN1	P23142	703 aa		18.39	■□□□□ 0.53
ABCA7-214	ENST00000531467	AMPH	P49418	695 aa		18.39	■□□□□ 0.53
ABCA7-214	ENST00000531467	MAP3K19	Q56UN5	1328 aa		18.39	■□□□□ 0.53
ABCA7-214	ENST00000531467	EIF4G2	P78344	907 aa	Known RBP eCLIP	18.38	■□□□□ 0.53
ABCA7-214	ENST00000531467	COG3	Q96JB2	828 aa		18.38	■□□□□ 0.53
ABCA7-214	ENST00000531467	GPBP1L1	Q9HC44	474 aa	Predicted RBP	18.38	■□□□□ 0.53
ABCA7-214	ENST00000531467	CD2AP	Q9Y5K6	639 aa		18.37	■□□□□ 0.53
ABCA7-214	ENST00000531467	MEGF6	O75095	1541 aa		18.37	■□□□□ 0.53
ABCA7-214	ENST00000531467	FYB1	O15117	783 aa		18.35	■□□□□ 0.53
ABCA7-214	ENST00000531467	HSPA5	P11021	654 aa	Known RBP	18.35	■□□□□ 0.53
ABCA7-214	ENST00000531467	ZNF526	Q8TF50	670 aa	Predicted RBP	18.35	■□□□□ 0.53
ABCA7-214	ENST00000531467	NBPF6	Q5VWK0	638 aa		18.34	■□□□□ 0.53
ABCA7-214	ENST00000531467	USHBP1	Q8N6Y0	703 aa		18.34	■□□□□ 0.53
ABCA7-214	ENST00000531467	FLAD1	Q8NFF5	587 aa		18.34	■□□□□ 0.53
ABCA7-214	ENST00000531467	NBPF4	Q96M43	638 aa		18.34	■□□□□ 0.53
ABCA7-214	ENST00000531467	RGPD2	P0DJD1	1756 aa		18.33	■□□□□ 0.53
ABCA7-214	ENST00000531467	RAPGEF4	Q8WZA2	1011 aa		18.33	■□□□□ 0.52
ABCA7-214	ENST00000531467	CARD14	Q9BXL6	1004 aa		18.33	■□□□□ 0.52
ABCA7-214	ENST00000531467	GGNBP2	Q9H3C7	697 aa		18.33	■□□□□ 0.52
ABCA7-214	ENST00000531467	CGNL1	Q0VF96	1302 aa		18.32	■□□□□ 0.52
ABCA7-214	ENST00000531467	HSPA6	P17066	643 aa		18.32	■□□□□ 0.52
ABCA7-214	ENST00000531467	HMGB2	P26583	209 aa	Known RBP	18.31	■□□□□ 0.52
ABCA7-214	ENST00000531467	RRS1	Q15050	365 aa	Known RBP	18.31	■□□□□ 0.52
ABCA7-214	ENST00000531467	NSD3	Q9BZ95	1437 aa		18.31	■□□□□ 0.52
ABCA7-214	ENST00000531467	TAT	P17735	454 aa	Predicted RBP	18.3	■□□□□ 0.52
ABCA7-214	ENST00000531467	ADCY9	O60503	1353 aa		18.3	■□□□□ 0.52
ABCA7-214	ENST00000531467	PALLD	Q8WX93	1383 aa		18.3	■□□□□ 0.52
ABCA7-214	ENST00000531467	C5	P01031	1676 aa		18.29	■□□□□ 0.52
ABCA7-214	ENST00000531467	MPRIP	Q6WCQ1	1025 aa		18.29	■□□□□ 0.52
ABCA7-214	ENST00000531467	POLR3GL	Q9BT43	218 aa		18.29	■□□□□ 0.52
ABCA7-214	ENST00000531467	WWC3	Q9ULE0	1092 aa		18.29	■□□□□ 0.52
ABCA7-214	ENST00000531467	RTL1	A6NKG5	1358 aa		18.29	■□□□□ 0.52
ABCA7-214	ENST00000531467	AK7	Q96M32	723 aa		18.28	■□□□□ 0.52
ABCA7-214	ENST00000531467	IGSF1	Q8N6C5	1336 aa		18.27	■□□□□ 0.52
ABCA7-214	ENST00000531467	PCDH11X	Q9BZA7	1347 aa		18.27	■□□□□ 0.52
ABCA7-214	ENST00000531467	PCDH11Y	Q9BZA8	1340 aa		18.27	■□□□□ 0.52
ABCA7-214	ENST00000531467	SMG6	Q86US8	1419 aa	Known RBP	18.27	■□□□□ 0.52
ABCA7-214	ENST00000531467	KIF20B	Q96Q89	1820 aa		18.26	■□□□□ 0.51
ABCA7-214	ENST00000531467	PHF14	O94880	888 aa		18.26	■□□□□ 0.51
ABCA7-214	ENST00000531467	SMIM5	Q71RC9	77 aa		18.26	■□□□□ 0.51
ABCA7-214	ENST00000531467	AMIGO3	Q86WK7	504 aa		18.26	■□□□□ 0.51
ABCA7-214	ENST00000531467	SMARCC1	Q92922	1105 aa	Predicted RBP	18.25	■□□□□ 0.51
ABCA7-214	ENST00000531467	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	18.24	■□□□□ 0.51
ABCA7-214	ENST00000531467	TAF1L	Q8IZX4	1826 aa		18.23	■□□□□ 0.51
ABCA7-214	ENST00000531467	CYP27B1	O15528	508 aa		18.23	■□□□□ 0.51
ABCA7-214	ENST00000531467	HSP90AB2P	Q58FF8	381 aa		18.23	■□□□□ 0.51
ABCA7-214	ENST00000531467	C4B	P0C0L5	1744 aa		18.23	■□□□□ 0.51
ABCA7-214	ENST00000531467	INSR	P06213	1382 aa		18.21	■□□□□ 0.51
ABCA7-214	ENST00000531467	KIF24	Q5T7B8	1368 aa		18.21	■□□□□ 0.51
ABCA7-214	ENST00000531467	KIF3C	O14782	793 aa		18.21	■□□□□ 0.51
ABCA7-214	ENST00000531467	PIGB	Q92521	554 aa		18.21	■□□□□ 0.51
ABCA7-214	ENST00000531467	FLT4	P35916	1363 aa		18.2	■□□□□ 0.5
ABCA7-214	ENST00000531467	SSFA2	P28290	1259 aa		18.2	■□□□□ 0.5
ABCA7-214	ENST00000531467	PANK3	Q9H999	370 aa		18.2	■□□□□ 0.5
ABCA7-214	ENST00000531467	TOGARAM1	Q9Y4F4	1720 aa		18.18	■□□□□ 0.5
ABCA7-214	ENST00000531467	LINC00116	Q8NCU8	138 aa		18.18	■□□□□ 0.5
ABCA7-214	ENST00000531467	EMILIN1	Q9Y6C2	1016 aa		18.18	■□□□□ 0.5
ABCA7-214	ENST00000531467	LOC102724428	A0A0B4J2F2	783 aa		18.17	■□□□□ 0.5
ABCA7-214	ENST00000531467	SIK1	P57059	783 aa		18.17	■□□□□ 0.5
ABCA7-214	ENST00000531467	UBR3	Q6ZT12	1888 aa		18.17	■□□□□ 0.5
ABCA7-214	ENST00000531467	ITGB4	P16144	1822 aa		18.16	■□□□□ 0.5
ABCA7-214	ENST00000531467	APLP1	P51693	650 aa		18.16	■□□□□ 0.5
ABCA7-214	ENST00000531467	GNPAT	O15228	680 aa		18.15	■□□□□ 0.5
ABCA7-214	ENST00000531467	NKX1-1	Q15270	411 aa	Predicted RBP	18.15	■□□□□ 0.5
ABCA7-214	ENST00000531467	SPG7	Q9UQ90	795 aa		18.15	■□□□□ 0.5
ABCA7-214	ENST00000531467	KIF7	Q2M1P5	1343 aa		18.15	■□□□□ 0.5
ABCA7-214	ENST00000531467	MMP10	P09238	476 aa		18.14	■□□□□ 0.49
ABCA7-214	ENST00000531467	ITPK1	Q13572	414 aa		18.14	■□□□□ 0.49
ABCA7-214	ENST00000531467	TMOD3	Q9NYL9	352 aa		18.14	■□□□□ 0.49
ABCA7-214	ENST00000531467	ASAP1	Q9ULH1	1129 aa		18.14	■□□□□ 0.49

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