RNA–Protein interactions for RNA: ENST00000531104.1

SRPRA-205, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 542 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-205ENST00000531104 RGPD5Q99666 1765 aa14.09□□□□□ -0.15
SRPRA-205ENST00000531104 SSH1Q8WYL5 1049 aa14.08□□□□□ -0.16
SRPRA-205ENST00000531104 KIAA0232Q92628 1395 aa14.08□□□□□ -0.16
SRPRA-205ENST00000531104 FAM208AQ9UK61 1670 aaKnown RBP14.07□□□□□ -0.16
SRPRA-205ENST00000531104 MCM10Q7L590 875 aa14.07□□□□□ -0.16
SRPRA-205ENST00000531104 LAS1LQ9Y4W2 734 aaKnown RBP14.07□□□□□ -0.16
SRPRA-205ENST00000531104 ERBB3P21860 1342 aa14.07□□□□□ -0.16
SRPRA-205ENST00000531104 MAP3K5Q99683 1374 aa14.07□□□□□ -0.16
SRPRA-205ENST00000531104 PLEKHG2Q9H7P9 1386 aa14.07□□□□□ -0.16
SRPRA-205ENST00000531104 ABCA3Q99758 1704 aa14.07□□□□□ -0.16
SRPRA-205ENST00000531104 USHBP1Q8N6Y0 703 aa14.06□□□□□ -0.16
SRPRA-205ENST00000531104 LRRC59Q96AG4 307 aaKnown RBP14.06□□□□□ -0.16
SRPRA-205ENST00000531104 GNAT3A8MTJ3 354 aa14.05□□□□□ -0.16
SRPRA-205ENST00000531104 ZC3H6P61129 1189 aaKnown RBP14.05□□□□□ -0.16
SRPRA-205ENST00000531104 AAMPQ13685 434 aa14.05□□□□□ -0.16
SRPRA-205ENST00000531104 ZKSCAN2Q63HK3 967 aa14.05□□□□□ -0.16
SRPRA-205ENST00000531104 TSPYL6Q8N831 410 aa14.05□□□□□ -0.16
SRPRA-205ENST00000531104 SMC4Q9NTJ3 1288 aa14.05□□□□□ -0.16
SRPRA-205ENST00000531104 BABAM1Q9NWV8 329 aa14.05□□□□□ -0.16
SRPRA-205ENST00000531104 CEMIPQ8WUJ3 1361 aa14.05□□□□□ -0.16
SRPRA-205ENST00000531104 ZBTB7CA1YPR0 619 aa14.04□□□□□ -0.16
SRPRA-205ENST00000531104 RLBP1P12271 317 aa14.04□□□□□ -0.16
SRPRA-205ENST00000531104 MRPL50Q8N5N7 158 aaKnown RBP14.04□□□□□ -0.16
SRPRA-205ENST00000531104 C8orf58Q8NAV2 365 aa14.04□□□□□ -0.16
SRPRA-205ENST00000531104 IL17REQ8NFR9 667 aa14.04□□□□□ -0.16
SRPRA-205ENST00000531104 CABLES1Q8TDN4 633 aa14.04□□□□□ -0.16
SRPRA-205ENST00000531104 PANK1Q8TE04 598 aa14.04□□□□□ -0.16
SRPRA-205ENST00000531104 RTF1Q92541 710 aaKnown RBP14.04□□□□□ -0.16
SRPRA-205ENST00000531104 BCL2L13Q9BXK5 485 aa14.04□□□□□ -0.16
SRPRA-205ENST00000531104 AHDC1Q5TGY3 1603 aaPredicted RBP14.04□□□□□ -0.16
SRPRA-205ENST00000531104 ADAMTS7Q9UKP4 1686 aa14.04□□□□□ -0.16
SRPRA-205ENST00000531104 MS4A1P11836 297 aa14.03□□□□□ -0.16
SRPRA-205ENST00000531104 TWISTNBQ3B726 338 aaPredicted RBP14.03□□□□□ -0.16
SRPRA-205ENST00000531104 AMOTQ4VCS5 1084 aa14.03□□□□□ -0.16
SRPRA-205ENST00000531104 FRAT1Q92837 279 aaPredicted RBP14.03□□□□□ -0.16
SRPRA-205ENST00000531104 TNNQ9UQP3 1299 aa14.03□□□□□ -0.16
SRPRA-205ENST00000531104 KDM2BQ8NHM5 1336 aa14.03□□□□□ -0.16
SRPRA-205ENST00000531104 KIF16BQ96L93 1317 aa14.03□□□□□ -0.16
SRPRA-205ENST00000531104 OVOS2A0A0G2JMS6 1433 aa14.02□□□□□ -0.16
SRPRA-205ENST00000531104 CANXP27824 592 aaKnown RBP14.02□□□□□ -0.17
SRPRA-205ENST00000531104 PLEKHO1Q53GL0 409 aaPredicted RBP14.02□□□□□ -0.17
SRPRA-205ENST00000531104 ATF7IPQ6VMQ6 1270 aa14.02□□□□□ -0.17
SRPRA-205ENST00000531104 ARHGAP45Q92619 1136 aa14.02□□□□□ -0.17
SRPRA-205ENST00000531104 TRIM27P14373 513 aa14.01□□□□□ -0.17
SRPRA-205ENST00000531104 AKAP4Q5JQC9 854 aa14.01□□□□□ -0.17
SRPRA-205ENST00000531104 DZIP1LQ8IYY4 767 aaKnown RBP14.01□□□□□ -0.17
SRPRA-205ENST00000531104 TSHZ2Q9NRE2 1034 aa14.01□□□□□ -0.17
SRPRA-205ENST00000531104 NOB1Q9ULX3 412 aaKnown RBP14.01□□□□□ -0.17
SRPRA-205ENST00000531104 COG6Q9Y2V7 657 aa14.01□□□□□ -0.17
SRPRA-205ENST00000531104 ROBO1Q9Y6N7 1651 aa14.01□□□□□ -0.17
SRPRA-205ENST00000531104 IPO8O15397 1037 aaKnown RBP14□□□□□ -0.17
SRPRA-205ENST00000531104 PLEKHG5O94827 1062 aa14□□□□□ -0.17
SRPRA-205ENST00000531104 HAP1P54257 671 aaPredicted RBP14□□□□□ -0.17
SRPRA-205ENST00000531104 MVPQ14764 893 aaKnown RBP14□□□□□ -0.17
SRPRA-205ENST00000531104 COL22A1Q8NFW1 1626 aaPredicted RBP14□□□□□ -0.17
SRPRA-205ENST00000531104 SOS1Q07889 1333 aaPredicted RBP13.99□□□□□ -0.17
SRPRA-205ENST00000531104 TAF7Q15545 349 aaPredicted RBP13.98□□□□□ -0.17
SRPRA-205ENST00000531104 CHRNA2Q15822 529 aa13.98□□□□□ -0.17
SRPRA-205ENST00000531104 CLUAP1Q96AJ1 413 aa13.98□□□□□ -0.17
SRPRA-205ENST00000531104 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.98□□□□□ -0.17
SRPRA-205ENST00000531104 TSPYL4Q9UJ04 414 aa13.98□□□□□ -0.17
SRPRA-205ENST00000531104 KDM3BQ7LBC6 1761 aa13.98□□□□□ -0.17
SRPRA-205ENST00000531104 PKD1L3Q7Z443 1732 aa13.98□□□□□ -0.17
SRPRA-205ENST00000531104 KRT24Q2M2I5 525 aa13.97□□□□□ -0.17
SRPRA-205ENST00000531104 ZNF530Q6P9A1 599 aaPredicted RBP13.97□□□□□ -0.17
SRPRA-205ENST00000531104 CENPQQ7L2Z9 268 aaPredicted RBP13.97□□□□□ -0.17
SRPRA-205ENST00000531104 COL5A2P05997 1499 aaPredicted RBP13.97□□□□□ -0.17
SRPRA-205ENST00000531104 SIPA1L3O60292 1781 aaPredicted RBP13.96□□□□□ -0.17
SRPRA-205ENST00000531104 MEGF6O75095 1541 aa13.96□□□□□ -0.17
SRPRA-205ENST00000531104 ELL2O00472 640 aaPredicted RBP13.96□□□□□ -0.17
SRPRA-205ENST00000531104 RNMTO43148 476 aaKnown RBP13.96□□□□□ -0.17
SRPRA-205ENST00000531104 KCNA4P22459 653 aa13.96□□□□□ -0.17
SRPRA-205ENST00000531104 LGR6Q9HBX8 967 aa13.96□□□□□ -0.17
SRPRA-205ENST00000531104 MIS18AQ9NYP9 233 aa13.96□□□□□ -0.17
SRPRA-205ENST00000531104 ABCC4O15439 1325 aa13.95□□□□□ -0.18
SRPRA-205ENST00000531104 WDR17Q8IZU2 1322 aa13.95□□□□□ -0.18
SRPRA-205ENST00000531104 VIRMAQ69YN4 1812 aaKnown RBP13.95□□□□□ -0.18
SRPRA-205ENST00000531104 FTSJ3Q8IY81 847 aaKnown RBP13.95□□□□□ -0.18
SRPRA-205ENST00000531104 NLRP2Q9NX02 1062 aa13.95□□□□□ -0.18
SRPRA-205ENST00000531104 RGS12O14924 1447 aa13.94□□□□□ -0.18
SRPRA-205ENST00000531104 TATP17735 454 aaPredicted RBP13.94□□□□□ -0.18
SRPRA-205ENST00000531104 TMEM57Q8N5G2 664 aa13.94□□□□□ -0.18
SRPRA-205ENST00000531104 PRDM11Q9NQV5 511 aa13.94□□□□□ -0.18
SRPRA-205ENST00000531104 DDX19BQ9UMR2 479 aa13.94□□□□□ -0.18
SRPRA-205ENST00000531104 C1orf141Q5JVX7 400 aa13.93□□□□□ -0.18
SRPRA-205ENST00000531104 RAPGEF4Q8WZA2 1011 aa13.93□□□□□ -0.18
SRPRA-205ENST00000531104 API5Q9BZZ5 524 aaKnown RBP13.93□□□□□ -0.18
SRPRA-205ENST00000531104 PARP4Q9UKK3 1724 aaKnown RBP13.93□□□□□ -0.18
SRPRA-205ENST00000531104 SCN11AQ9UI33 1791 aa13.92□□□□□ -0.18
SRPRA-205ENST00000531104 IGHDP01880 384 aa13.92□□□□□ -0.18
SRPRA-205ENST00000531104 CSB-PGBD3P0DP91 1061 aa13.92□□□□□ -0.18
SRPRA-205ENST00000531104 SPG7Q9UQ90 795 aa13.92□□□□□ -0.18
SRPRA-205ENST00000531104 PCDHB15Q9Y5E8 787 aa13.92□□□□□ -0.18
SRPRA-205ENST00000531104 COL16A1Q07092 1604 aaPredicted RBP13.92□□□□□ -0.18
SRPRA-205ENST00000531104 MRC1P22897 1456 aa13.92□□□□□ -0.18
SRPRA-205ENST00000531104 PTPRCP08575 1304 aa13.91□□□□□ -0.18
SRPRA-205ENST00000531104 COL14A1Q05707 1796 aaKnown RBP13.91□□□□□ -0.18
SRPRA-205ENST00000531104 KDM6AO15550 1401 aaPredicted RBP13.91□□□□□ -0.18
SRPRA-205ENST00000531104 HOXB7P09629 217 aa13.91□□□□□ -0.18
SRPRA-205ENST00000531104 PHKG2P15735 406 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms