RNA–Protein interactions for RNA: ENST00000531089.5

CTSB-220, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTSB, Length 1,436 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-220ENST00000531089 PPP1R1BQ9UD71 204 aaPredicted RBP21.46■■□□□ 1.03
CTSB-220ENST00000531089 MEGF6O75095 1541 aa21.45■■□□□ 1.02
CTSB-220ENST00000531089 PTGER2P43116 358 aa21.45■■□□□ 1.02
CTSB-220ENST00000531089 SHANK3Q9BYB0 1731 aa21.45■■□□□ 1.02
CTSB-220ENST00000531089 NSD3Q9BZ95 1437 aa21.45■■□□□ 1.02
CTSB-220ENST00000531089 ATF5Q9Y2D1 282 aaPredicted RBP21.45■■□□□ 1.02
CTSB-220ENST00000531089 EMILIN1Q9Y6C2 1016 aa21.45■■□□□ 1.02
CTSB-220ENST00000531089 MAP2P11137 1827 aaKnown RBP21.44■■□□□ 1.02
CTSB-220ENST00000531089 KIF24Q5T7B8 1368 aa21.44■■□□□ 1.02
CTSB-220ENST00000531089 POLR3GLQ9BT43 218 aa21.44■■□□□ 1.02
CTSB-220ENST00000531089 CGNL1Q0VF96 1302 aa21.43■■□□□ 1.02
CTSB-220ENST00000531089 FLT4P35916 1363 aa21.42■■□□□ 1.02
CTSB-220ENST00000531089 SYTL4Q96C24 671 aaPredicted RBP21.42■■□□□ 1.02
CTSB-220ENST00000531089 RAPGEF4Q8WZA2 1011 aa21.41■■□□□ 1.02
CTSB-220ENST00000531089 TATP17735 454 aaPredicted RBP21.4■■□□□ 1.02
CTSB-220ENST00000531089 ZNF827Q17R98 1081 aa21.4■■□□□ 1.02
CTSB-220ENST00000531089 SLC27A3Q5K4L6 730 aa21.4■■□□□ 1.02
CTSB-220ENST00000531089 PAPPAQ13219 1627 aa21.4■■□□□ 1.02
CTSB-220ENST00000531089 KCNQ4P56696 695 aa21.39■■□□□ 1.02
CTSB-220ENST00000531089 AKT1S1Q96B36 256 aa21.39■■□□□ 1.02
CTSB-220ENST00000531089 SGIP1Q9BQI5 828 aa21.39■■□□□ 1.02
CTSB-220ENST00000531089 NSD2O96028 1365 aa21.39■■□□□ 1.01
CTSB-220ENST00000531089 WASHC2AQ641Q2 1341 aa21.39■■□□□ 1.01
CTSB-220ENST00000531089 MTFR1LQ9H019 292 aa21.38■■□□□ 1.01
CTSB-220ENST00000531089 SMG6Q86US8 1419 aaKnown RBP21.38■■□□□ 1.01
CTSB-220ENST00000531089 PPM1GO15355 546 aaPredicted RBP21.38■■□□□ 1.01
CTSB-220ENST00000531089 POLKQ9UBT6 870 aa21.38■■□□□ 1.01
CTSB-220ENST00000531089 DOT1LQ8TEK3 1739 aa21.37■■□□□ 1.01
CTSB-220ENST00000531089 CYP27B1O15528 508 aa21.36■■□□□ 1.01
CTSB-220ENST00000531089 PANK3Q9H999 370 aa21.35■■□□□ 1.01
CTSB-220ENST00000531089 LY75O60449 1722 aa21.35■■□□□ 1.01
CTSB-220ENST00000531089 EYA1Q99502 592 aa21.34■■□□□ 1.01
CTSB-220ENST00000531089 SYT17Q9BSW7 474 aa21.32■■□□□ 1
CTSB-220ENST00000531089 PCDH11XQ9BZA7 1347 aa21.32■■□□□ 1
CTSB-220ENST00000531089 PCDH11YQ9BZA8 1340 aa21.32■■□□□ 1
CTSB-220ENST00000531089 ANKRD26Q9UPS8 1709 aa21.31■■□□□ 1
CTSB-220ENST00000531089 NCAPD2Q15021 1401 aa21.31■■□□□ 1
CTSB-220ENST00000531089 TNNT2P45379 298 aaPredicted RBP21.3■■□□□ 1
CTSB-220ENST00000531089 SLC16A10Q8TF71 515 aa21.3■■□□□ 1
CTSB-220ENST00000531089 FHDC1Q9C0D6 1143 aaPredicted RBP21.3■■□□□ 1
CTSB-220ENST00000531089 PNPLA7Q6ZV29 1317 aa21.3■■□□□ 1
CTSB-220ENST00000531089 UTRNP46939 3433 aa21.3■■□□□ 1
CTSB-220ENST00000531089 NKX1-1Q15270 411 aaPredicted RBP21.29■■□□□ 1
CTSB-220ENST00000531089 QSER1Q2KHR3 1735 aa21.29■■□□□ 1
CTSB-220ENST00000531089 TFCP2L1Q9NZI6 479 aa21.29■■□□□ 1
CTSB-220ENST00000531089 CCNL1Q9UK58 526 aaPredicted RBP21.29■■□□□ 1
CTSB-220ENST00000531089 MPRIPQ6WCQ1 1025 aa21.29■■□□□ 1
CTSB-220ENST00000531089 ARXQ96QS3 562 aa21.29■■□□□ 1
CTSB-220ENST00000531089 ITGB4P16144 1822 aa21.28■■□□□ 1
CTSB-220ENST00000531089 DCAF8L1A6NGE4 600 aa21.28■■□□□ 1
CTSB-220ENST00000531089 EIF4A2Q14240 407 aaKnown RBP21.28■■□□□ 1
CTSB-220ENST00000531089 TUBGCP6Q96RT7 1819 aa21.27■■□□□ 1
CTSB-220ENST00000531089 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.27■■□□□ 1
CTSB-220ENST00000531089 SPG7Q9UQ90 795 aa21.27■■□□□ 1
CTSB-220ENST00000531089 PKD1L3Q7Z443 1732 aa21.26■□□□□ 0.99
CTSB-220ENST00000531089 YY1P25490 414 aa21.25■□□□□ 0.99
CTSB-220ENST00000531089 PIGBQ92521 554 aa21.25■□□□□ 0.99
CTSB-220ENST00000531089 COL24A1Q17RW2 1714 aa21.24■□□□□ 0.99
CTSB-220ENST00000531089 COL23A1Q86Y22 540 aaPredicted RBP21.23■□□□□ 0.99
CTSB-220ENST00000531089 TOGARAM1Q9Y4F4 1720 aa21.23■□□□□ 0.99
CTSB-220ENST00000531089 KIF7Q2M1P5 1343 aa21.22■□□□□ 0.99
CTSB-220ENST00000531089 TAF1LQ8IZX4 1826 aa21.22■□□□□ 0.99
CTSB-220ENST00000531089 PALLDQ8WX93 1383 aa21.21■□□□□ 0.99
CTSB-220ENST00000531089 PHKG2P15735 406 aa21.21■□□□□ 0.99
CTSB-220ENST00000531089 IFNL2Q8IZJ0 200 aa21.21■□□□□ 0.99
CTSB-220ENST00000531089 SMARCC1Q92922 1105 aaPredicted RBP21.21■□□□□ 0.99
CTSB-220ENST00000531089 MORC1Q86VD1 984 aa21.2■□□□□ 0.98
CTSB-220ENST00000531089 MAP3K5Q99683 1374 aa21.19■□□□□ 0.98
CTSB-220ENST00000531089 IGSF1Q8N6C5 1336 aa21.19■□□□□ 0.98
CTSB-220ENST00000531089 KNSTRNQ9Y448 316 aa21.19■□□□□ 0.98
CTSB-220ENST00000531089 POLD1P28340 1107 aa21.18■□□□□ 0.98
CTSB-220ENST00000531089 HMGB2P26583 209 aaKnown RBP21.17■□□□□ 0.98
CTSB-220ENST00000531089 C5P01031 1676 aa21.17■□□□□ 0.98
CTSB-220ENST00000531089 GOLGB1Q14789 3259 aaKnown RBP21.16■□□□□ 0.98
CTSB-220ENST00000531089 MSH5O43196 834 aa21.16■□□□□ 0.98
CTSB-220ENST00000531089 AMER1Q5JTC6 1135 aaPredicted RBP21.16■□□□□ 0.98
CTSB-220ENST00000531089 ASAP1Q9ULH1 1129 aa21.16■□□□□ 0.98
CTSB-220ENST00000531089 TMOD3Q9NYL9 352 aa21.15■□□□□ 0.98
CTSB-220ENST00000531089 PER1O15534 1290 aaPredicted RBP21.14■□□□□ 0.98
CTSB-220ENST00000531089 AMIGO3Q86WK7 504 aa21.14■□□□□ 0.98
CTSB-220ENST00000531089 LOC102724428A0A0B4J2F2 783 aa21.13■□□□□ 0.97
CTSB-220ENST00000531089 SIK1P57059 783 aa21.13■□□□□ 0.97
CTSB-220ENST00000531089 FLAD1Q8NFF5 587 aa21.13■□□□□ 0.97
CTSB-220ENST00000531089 ATG3Q9NT62 314 aa21.13■□□□□ 0.97
CTSB-220ENST00000531089 PLEKHO1Q53GL0 409 aaPredicted RBP21.12■□□□□ 0.97
CTSB-220ENST00000531089 SMIM5Q71RC9 77 aa21.12■□□□□ 0.97
CTSB-220ENST00000531089 PLEKHG2Q9H7P9 1386 aa21.12■□□□□ 0.97
CTSB-220ENST00000531089 CHD4Q14839 1912 aa21.12■□□□□ 0.97
CTSB-220ENST00000531089 AEBP1Q8IUX7 1158 aa21.12■□□□□ 0.97
CTSB-220ENST00000531089 C4BP0C0L5 1744 aa21.11■□□□□ 0.97
CTSB-220ENST00000531089 ERVV-2B6SEH9 535 aa21.11■□□□□ 0.97
CTSB-220ENST00000531089 IL13P35225 146 aa21.11■□□□□ 0.97
CTSB-220ENST00000531089 MSL1Q68DK7 614 aa21.11■□□□□ 0.97
CTSB-220ENST00000531089 KLHL34Q8N239 644 aa21.11■□□□□ 0.97
CTSB-220ENST00000531089 LINC00116Q8NCU8 138 aa21.11■□□□□ 0.97
CTSB-220ENST00000531089 ITPK1Q13572 414 aa21.1■□□□□ 0.97
CTSB-220ENST00000531089 NLGN2Q8NFZ4 835 aa21.1■□□□□ 0.97
CTSB-220ENST00000531089 UBR3Q6ZT12 1888 aa21.09■□□□□ 0.97
CTSB-220ENST00000531089 ATP6V1AP38606 617 aa21.09■□□□□ 0.97
CTSB-220ENST00000531089 AMOTQ4VCS5 1084 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms