RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 FCHSD2O94868 740 aa13.04□□□□□ -0.32
CTNND1-228ENST00000531007 RUNDC1Q96C34 613 aa13.04□□□□□ -0.32
CTNND1-228ENST00000531007 ALS2Q96Q42 1657 aa13.04□□□□□ -0.32
CTNND1-228ENST00000531007 SOS2Q07890 1332 aaPredicted RBP13.04□□□□□ -0.32
CTNND1-228ENST00000531007 TNS3Q68CZ2 1445 aa13.04□□□□□ -0.32
CTNND1-228ENST00000531007 PHRF1Q9P1Y6 1649 aaKnown RBP13.03□□□□□ -0.32
CTNND1-228ENST00000531007 MARF1Q9Y4F3 1742 aaKnown RBP13.03□□□□□ -0.32
CTNND1-228ENST00000531007 RGL2O15211 777 aa13.03□□□□□ -0.32
CTNND1-228ENST00000531007 EMILIN1Q9Y6C2 1016 aa13.03□□□□□ -0.32
CTNND1-228ENST00000531007 PPM1GO15355 546 aaPredicted RBP13.02□□□□□ -0.33
CTNND1-228ENST00000531007 NEFMP07197 916 aa13.02□□□□□ -0.33
CTNND1-228ENST00000531007 U2AF1L5P0DN76 240 aaPredicted RBP13.02□□□□□ -0.33
CTNND1-228ENST00000531007 IL13P35225 146 aa13.02□□□□□ -0.33
CTNND1-228ENST00000531007 AMPHP49418 695 aa13.02□□□□□ -0.33
CTNND1-228ENST00000531007 U2AF1Q01081 240 aaKnown RBP eCLIP13.02□□□□□ -0.33
CTNND1-228ENST00000531007 MAP3K19Q56UN5 1328 aa13.02□□□□□ -0.33
CTNND1-228ENST00000531007 SPATA31A3Q5VYP0 1347 aa13.02□□□□□ -0.33
CTNND1-228ENST00000531007 RRS1Q15050 365 aaKnown RBP13.01□□□□□ -0.33
CTNND1-228ENST00000531007 PDCD7Q8N8D1 485 aaKnown RBP13.01□□□□□ -0.33
CTNND1-228ENST00000531007 NFAT5O94916 1531 aa13.01□□□□□ -0.33
CTNND1-228ENST00000531007 ABCC6O95255 1503 aa13.01□□□□□ -0.33
CTNND1-228ENST00000531007 MED1Q15648 1581 aaPredicted RBP13.01□□□□□ -0.33
CTNND1-228ENST00000531007 NHSL1Q5SYE7 1610 aa13.01□□□□□ -0.33
CTNND1-228ENST00000531007 U2SURPO15042 1029 aaKnown RBP13□□□□□ -0.33
CTNND1-228ENST00000531007 GCP02774 474 aa13□□□□□ -0.33
CTNND1-228ENST00000531007 EFCAB3Q8N7B9 438 aa13□□□□□ -0.33
CTNND1-228ENST00000531007 CCDC27Q2M243 656 aa12.99□□□□□ -0.33
CTNND1-228ENST00000531007 IP6K1Q92551 441 aa12.99□□□□□ -0.33
CTNND1-228ENST00000531007 MAPK8IP3Q9UPT6 1336 aa12.98□□□□□ -0.33
CTNND1-228ENST00000531007 AHDC1Q5TGY3 1603 aaPredicted RBP12.98□□□□□ -0.33
CTNND1-228ENST00000531007 CPDO75976 1380 aa12.97□□□□□ -0.33
CTNND1-228ENST00000531007 HOXC9P31274 260 aa12.97□□□□□ -0.33
CTNND1-228ENST00000531007 XPCQ01831 940 aaPredicted RBP12.97□□□□□ -0.33
CTNND1-228ENST00000531007 NUTM2GQ5VZR2 741 aa12.97□□□□□ -0.33
CTNND1-228ENST00000531007 LMOD2Q6P5Q4 547 aa12.97□□□□□ -0.33
CTNND1-228ENST00000531007 ARHGEF25Q86VW2 580 aa12.97□□□□□ -0.33
CTNND1-228ENST00000531007 PLEKHF1Q96S99 279 aa12.97□□□□□ -0.33
CTNND1-228ENST00000531007 BCL11BQ9C0K0 894 aaPredicted RBP12.97□□□□□ -0.33
CTNND1-228ENST00000531007 PEAK1Q9H792 1746 aa12.96□□□□□ -0.33
CTNND1-228ENST00000531007 FBLN1P23142 703 aa12.96□□□□□ -0.33
CTNND1-228ENST00000531007 EIF4A2Q14240 407 aaKnown RBP12.96□□□□□ -0.33
CTNND1-228ENST00000531007 HSP90AB2PQ58FF8 381 aa12.96□□□□□ -0.33
CTNND1-228ENST00000531007 LRRC59Q96AG4 307 aaKnown RBP12.96□□□□□ -0.33
CTNND1-228ENST00000531007 LTN1O94822 1766 aa12.95□□□□□ -0.34
CTNND1-228ENST00000531007 STK25O00506 426 aa12.95□□□□□ -0.34
CTNND1-228ENST00000531007 APAF1O14727 1248 aa12.95□□□□□ -0.34
CTNND1-228ENST00000531007 L3MBTL3Q96JM7 780 aaPredicted RBP12.95□□□□□ -0.34
CTNND1-228ENST00000531007 RSPH6AQ9H0K4 717 aa12.95□□□□□ -0.34
CTNND1-228ENST00000531007 STK24Q9Y6E0 443 aa12.95□□□□□ -0.34
CTNND1-228ENST00000531007 PLEKHG2Q9H7P9 1386 aa12.94□□□□□ -0.34
CTNND1-228ENST00000531007 ZNF521Q96K83 1311 aa12.94□□□□□ -0.34
CTNND1-228ENST00000531007 RGPD1P0DJD0 1748 aa12.94□□□□□ -0.34
CTNND1-228ENST00000531007 ROBO1Q9Y6N7 1651 aa12.94□□□□□ -0.34
CTNND1-228ENST00000531007 SOX12O15370 315 aa12.94□□□□□ -0.34
CTNND1-228ENST00000531007 HSPA1LP34931 641 aa12.94□□□□□ -0.34
CTNND1-228ENST00000531007 WDR63Q8IWG1 891 aa12.94□□□□□ -0.34
CTNND1-228ENST00000531007 TCP11L2Q8N4U5 519 aa12.94□□□□□ -0.34
CTNND1-228ENST00000531007 KDRP35968 1356 aa12.94□□□□□ -0.34
CTNND1-228ENST00000531007 IGSF1Q8N6C5 1336 aa12.93□□□□□ -0.34
CTNND1-228ENST00000531007 LMOD3Q0VAK6 560 aa12.93□□□□□ -0.34
CTNND1-228ENST00000531007 CCDC146Q8IYE0 955 aa12.93□□□□□ -0.34
CTNND1-228ENST00000531007 CRYBG1Q9Y4K1 1723 aa12.93□□□□□ -0.34
CTNND1-228ENST00000531007 CALD1Q05682 793 aaKnown RBP12.92□□□□□ -0.34
CTNND1-228ENST00000531007 E9PSI1 815 aa12.91□□□□□ -0.34
CTNND1-228ENST00000531007 PRKAR2BP31323 418 aa12.91□□□□□ -0.34
CTNND1-228ENST00000531007 TMPOP42166 694 aaKnown RBP12.91□□□□□ -0.34
CTNND1-228ENST00000531007 DDX17Q92841 729 aaKnown RBP12.91□□□□□ -0.34
CTNND1-228ENST00000531007 IL16Q14005 1332 aa12.9□□□□□ -0.34
CTNND1-228ENST00000531007 NFE2L2Q16236 605 aa12.9□□□□□ -0.34
CTNND1-228ENST00000531007 SULT6B1Q6IMI4 303 aa12.9□□□□□ -0.34
CTNND1-228ENST00000531007 WWC1Q8IX03 1113 aa12.9□□□□□ -0.34
CTNND1-228ENST00000531007 EYA1Q99502 592 aa12.9□□□□□ -0.34
CTNND1-228ENST00000531007 COL22A1Q8NFW1 1626 aaPredicted RBP12.9□□□□□ -0.34
CTNND1-228ENST00000531007 NCAPD2Q15021 1401 aa12.89□□□□□ -0.35
CTNND1-228ENST00000531007 FAM208AQ9UK61 1670 aaKnown RBP12.89□□□□□ -0.35
CTNND1-228ENST00000531007 G3V3G9 751 aa12.88□□□□□ -0.35
CTNND1-228ENST00000531007 HMOX1P09601 288 aa12.88□□□□□ -0.35
CTNND1-228ENST00000531007 HAP1P54257 671 aaPredicted RBP12.88□□□□□ -0.35
CTNND1-228ENST00000531007 TRMT2AQ8IZ69 625 aaKnown RBP12.88□□□□□ -0.35
CTNND1-228ENST00000531007 GAS2L2Q8NHY3 880 aa12.88□□□□□ -0.35
CTNND1-228ENST00000531007 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.88□□□□□ -0.35
CTNND1-228ENST00000531007 ERBB3P21860 1342 aa12.88□□□□□ -0.35
CTNND1-228ENST00000531007 HTATSF1O43719 755 aaKnown RBP12.87□□□□□ -0.35
CTNND1-228ENST00000531007 RIPK4P57078 832 aa12.87□□□□□ -0.35
CTNND1-228ENST00000531007 SLFN5Q08AF3 891 aa12.87□□□□□ -0.35
CTNND1-228ENST00000531007 DPY19L2Q6NUT2 758 aa12.87□□□□□ -0.35
CTNND1-228ENST00000531007 MYH16Q9H6N6 1097 aa12.87□□□□□ -0.35
CTNND1-228ENST00000531007 SALL2Q9Y467 1007 aaPredicted RBP12.87□□□□□ -0.35
CTNND1-228ENST00000531007 COL18A1P39060 1754 aa12.86□□□□□ -0.35
CTNND1-228ENST00000531007 CAMTA1Q9Y6Y1 1673 aa12.86□□□□□ -0.35
CTNND1-228ENST00000531007 KIAA0232Q92628 1395 aa12.86□□□□□ -0.35
CTNND1-228ENST00000531007 PHLPP1O60346 1717 aa12.86□□□□□ -0.35
CTNND1-228ENST00000531007 ZC3H6P61129 1189 aaKnown RBP12.86□□□□□ -0.35
CTNND1-228ENST00000531007 C3orf67Q6ZVT6 689 aa12.86□□□□□ -0.35
CTNND1-228ENST00000531007 SLAIN1Q8ND83 568 aa12.86□□□□□ -0.35
CTNND1-228ENST00000531007 ANKRD24Q8TF21 1146 aa12.86□□□□□ -0.35
CTNND1-228ENST00000531007 ABCA3Q99758 1704 aa12.85□□□□□ -0.35
CTNND1-228ENST00000531007 COL16A1Q07092 1604 aaPredicted RBP12.85□□□□□ -0.35
CTNND1-228ENST00000531007 AMOTQ4VCS5 1084 aa12.85□□□□□ -0.35
CTNND1-228ENST00000531007 PRDM11Q9NQV5 511 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms