RNA–Protein interactions for RNA: ENST00000530701.1

FGFR1-235, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 276 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-235ENST00000530701 FAM160A2Q8N612 972 aaPredicted RBP3.22□□□□□ -1.89
FGFR1-235ENST00000530701 ASB16Q96NS5 453 aa3.22□□□□□ -1.89
FGFR1-235ENST00000530701 CCDC85AQ96PX6 553 aaPredicted RBP3.22□□□□□ -1.89
FGFR1-235ENST00000530701 PRDM9Q9NQV7 894 aa3.22□□□□□ -1.89
FGFR1-235ENST00000530701 KIAA1522Q9P206 1035 aaPredicted RBP3.22□□□□□ -1.89
FGFR1-235ENST00000530701 SLAIN2Q9P270 581 aa3.22□□□□□ -1.89
FGFR1-235ENST00000530701 KIAA1024Q9UPX6 916 aa3.22□□□□□ -1.89
FGFR1-235ENST00000530701 M0R2N6 131 aa3.21□□□□□ -1.9
FGFR1-235ENST00000530701 BACH1O14867 736 aa3.21□□□□□ -1.9
FGFR1-235ENST00000530701 ZBTB24O43167 697 aaPredicted RBP3.21□□□□□ -1.9
FGFR1-235ENST00000530701 NDUFB5O43674 189 aa3.21□□□□□ -1.9
FGFR1-235ENST00000530701 FAM13AO94988 1023 aa3.21□□□□□ -1.9
FGFR1-235ENST00000530701 HSP90B1P14625 803 aaKnown RBP3.21□□□□□ -1.9
FGFR1-235ENST00000530701 SCNN1AP37088 669 aa3.21□□□□□ -1.9
FGFR1-235ENST00000530701 ZC3H6P61129 1189 aaKnown RBP3.21□□□□□ -1.9
FGFR1-235ENST00000530701 OCLNQ16625 522 aa3.21□□□□□ -1.9
FGFR1-235ENST00000530701 TSNAXIP1Q2TAA8 658 aa3.21□□□□□ -1.9
FGFR1-235ENST00000530701 TSGA10IPQ3SY00 556 aa3.21□□□□□ -1.9
FGFR1-235ENST00000530701 LINC01559Q495D7 138 aa3.21□□□□□ -1.9
FGFR1-235ENST00000530701 ERFEQ4G0M1 354 aa3.21□□□□□ -1.9
FGFR1-235ENST00000530701 ANKRD13DQ6ZTN6 518 aa3.21□□□□□ -1.9
FGFR1-235ENST00000530701 BAP1Q92560 729 aa3.21□□□□□ -1.9
FGFR1-235ENST00000530701 MARVELD3Q96A59 401 aa3.21□□□□□ -1.9
FGFR1-235ENST00000530701 DRC1Q96MC2 740 aa3.21□□□□□ -1.9
FGFR1-235ENST00000530701 OCSTAMPQ9BR26 566 aa3.21□□□□□ -1.9
FGFR1-235ENST00000530701 SLC6A16Q9GZN6 736 aa3.21□□□□□ -1.9
FGFR1-235ENST00000530701 MRS2Q9HD23 443 aa3.21□□□□□ -1.9
FGFR1-235ENST00000530701 ZBTB7BO15156 539 aaPredicted RBP3.2□□□□□ -1.9
FGFR1-235ENST00000530701 FOXO3O43524 673 aa3.2□□□□□ -1.9
FGFR1-235ENST00000530701 ZPR1O75312 459 aa3.2□□□□□ -1.9
FGFR1-235ENST00000530701 LGR5O75473 907 aa3.2□□□□□ -1.9
FGFR1-235ENST00000530701 VAMP1P23763 118 aa3.2□□□□□ -1.9
FGFR1-235ENST00000530701 XPCQ01831 940 aaPredicted RBP3.2□□□□□ -1.9
FGFR1-235ENST00000530701 COL19A1Q14993 1142 aa3.2□□□□□ -1.9
FGFR1-235ENST00000530701 SF3A1Q15459 793 aaKnown RBP3.2□□□□□ -1.9
FGFR1-235ENST00000530701 NYAP1Q6ZVC0 841 aa3.2□□□□□ -1.9
FGFR1-235ENST00000530701 RGL4Q8IZJ4 473 aa3.2□□□□□ -1.9
FGFR1-235ENST00000530701 ZNF511Q8NB15 262 aa3.2□□□□□ -1.9
FGFR1-235ENST00000530701 TSEN2Q8NCE0 465 aaKnown RBP3.2□□□□□ -1.9
FGFR1-235ENST00000530701 HELQQ8TDG4 1101 aa3.2□□□□□ -1.9
FGFR1-235ENST00000530701 SREK1Q8WXA9 508 aaKnown RBP3.2□□□□□ -1.9
FGFR1-235ENST00000530701 COL26A1Q96A83 441 aa3.2□□□□□ -1.9
FGFR1-235ENST00000530701 IGSF5Q9NSI5 407 aa3.2□□□□□ -1.9
FGFR1-235ENST00000530701 WBP1LQ9NX94 342 aa3.2□□□□□ -1.9
FGFR1-235ENST00000530701 PCDH10Q9P2E7 1040 aa3.2□□□□□ -1.9
FGFR1-235ENST00000530701 PPP1R1BQ9UD71 204 aaPredicted RBP3.2□□□□□ -1.9
FGFR1-235ENST00000530701 SEPT3Q9UH03 358 aa3.2□□□□□ -1.9
FGFR1-235ENST00000530701 BRPF3Q9ULD4 1205 aa3.2□□□□□ -1.9
FGFR1-235ENST00000530701 CHMP3Q9Y3E7 222 aa3.2□□□□□ -1.9
FGFR1-235ENST00000530701 DNMT3AQ9Y6K1 912 aaPredicted RBP3.2□□□□□ -1.9
FGFR1-235ENST00000530701 HRO43593 1189 aa3.19□□□□□ -1.9
FGFR1-235ENST00000530701 TLL1O43897 1013 aa3.19□□□□□ -1.9
FGFR1-235ENST00000530701 ST18O60284 1047 aa3.19□□□□□ -1.9
FGFR1-235ENST00000530701 ERCC5P28715 1186 aaPredicted RBP3.19□□□□□ -1.9
FGFR1-235ENST00000530701 WEE1P30291 646 aa3.19□□□□□ -1.9
FGFR1-235ENST00000530701 ATP2B2Q01814 1243 aa3.19□□□□□ -1.9
FGFR1-235ENST00000530701 FKBP5Q13451 457 aaPredicted RBP3.19□□□□□ -1.9
FGFR1-235ENST00000530701 MTMR3Q13615 1198 aa3.19□□□□□ -1.9
FGFR1-235ENST00000530701 NAA30Q147X3 362 aaPredicted RBP3.19□□□□□ -1.9
FGFR1-235ENST00000530701 ALKBH2Q6NS38 261 aa3.19□□□□□ -1.9
FGFR1-235ENST00000530701 SH3RF1Q7Z6J0 888 aa3.19□□□□□ -1.9
FGFR1-235ENST00000530701 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.19□□□□□ -1.9
FGFR1-235ENST00000530701 CHMP7Q8WUX9 453 aaPredicted RBP3.19□□□□□ -1.9
FGFR1-235ENST00000530701 SCG3Q8WXD2 468 aaKnown RBP3.19□□□□□ -1.9
FGFR1-235ENST00000530701 FOXJ1Q92949 421 aa3.19□□□□□ -1.9
FGFR1-235ENST00000530701 C8orf37Q96NL8 207 aa3.19□□□□□ -1.9
FGFR1-235ENST00000530701 HS3ST6Q96QI5 342 aa3.19□□□□□ -1.9
FGFR1-235ENST00000530701 KCTD15Q96SI1 283 aaPredicted RBP3.19□□□□□ -1.9
FGFR1-235ENST00000530701 PCDHGA11Q9Y5H2 935 aa3.19□□□□□ -1.9
FGFR1-235ENST00000530701 ESPNB1AK53 854 aa3.18□□□□□ -1.9
FGFR1-235ENST00000530701 DKK1O94907 266 aa3.18□□□□□ -1.9
FGFR1-235ENST00000530701 CDK11BP21127 795 aaKnown RBP3.18□□□□□ -1.9
FGFR1-235ENST00000530701 IGFBP4P22692 258 aa3.18□□□□□ -1.9
FGFR1-235ENST00000530701 MAPK8P45983 427 aa3.18□□□□□ -1.9
FGFR1-235ENST00000530701 ARHGAP4P98171 946 aa3.18□□□□□ -1.9
FGFR1-235ENST00000530701 PDE3BQ13370 1112 aa3.18□□□□□ -1.9
FGFR1-235ENST00000530701 ARID5BQ14865 1188 aa3.18□□□□□ -1.9
FGFR1-235ENST00000530701 NOM1Q5C9Z4 860 aaKnown RBP3.18□□□□□ -1.9
FGFR1-235ENST00000530701 PTCRAQ6ISU1 281 aaPredicted RBP3.18□□□□□ -1.9
FGFR1-235ENST00000530701 VASH1Q7L8A9 365 aaPredicted RBP3.18□□□□□ -1.9
FGFR1-235ENST00000530701 TRMT44Q8IYL2 757 aaKnown RBP3.18□□□□□ -1.9
FGFR1-235ENST00000530701 GAS2L2Q8NHY3 880 aa3.18□□□□□ -1.9
FGFR1-235ENST00000530701 CITED4Q96RK1 184 aa3.18□□□□□ -1.9
FGFR1-235ENST00000530701 CDK11AQ9UQ88 783 aaPredicted RBP3.18□□□□□ -1.9
FGFR1-235ENST00000530701 FCF1Q9Y324 198 aaKnown RBP3.18□□□□□ -1.9
FGFR1-235ENST00000530701 ATAD2Q6PL18 1390 aa3.17□□□□□ -1.9
FGFR1-235ENST00000530701 SCAMP3O14828 347 aaKnown RBP3.17□□□□□ -1.9
FGFR1-235ENST00000530701 CANXP27824 592 aaKnown RBP3.17□□□□□ -1.9
FGFR1-235ENST00000530701 DHX9Q08211 1270 aaKnown RBP3.17□□□□□ -1.9
FGFR1-235ENST00000530701 ESCO1Q5FWF5 840 aa3.17□□□□□ -1.9
FGFR1-235ENST00000530701 CC2D2BQ6DHV5 1058 aa3.17□□□□□ -1.9
FGFR1-235ENST00000530701 C16orf46Q6P387 395 aa3.17□□□□□ -1.9
FGFR1-235ENST00000530701 FBXO33Q7Z6M2 555 aa3.17□□□□□ -1.9
FGFR1-235ENST00000530701 ABTB2Q8N961 1025 aa3.17□□□□□ -1.9
FGFR1-235ENST00000530701 TTC16Q8NEE8 873 aa3.17□□□□□ -1.9
FGFR1-235ENST00000530701 UBXN4Q92575 508 aa3.17□□□□□ -1.9
FGFR1-235ENST00000530701 DMRTB1Q96MA1 342 aa3.17□□□□□ -1.9
FGFR1-235ENST00000530701 PUS7Q96PZ0 661 aaKnown RBP3.17□□□□□ -1.9
FGFR1-235ENST00000530701 MTRQ99707 1265 aa3.17□□□□□ -1.9
FGFR1-235ENST00000530701 IL21Q9HBE4 155 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms