RNA–Protein interactions for RNA: ENST00000530618.1

SSBP3-213, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-213ENST00000530618 C5P01031 1676 aa6.56□□□□□ -1.36
SSBP3-213ENST00000530618 ZBTB7CA1YPR0 619 aa6.56□□□□□ -1.36
SSBP3-213ENST00000530618 EVX2Q03828 476 aa6.56□□□□□ -1.36
SSBP3-213ENST00000530618 TXNRD1Q16881 649 aa6.56□□□□□ -1.36
SSBP3-213ENST00000530618 KCNH5Q8NCM2 988 aa6.56□□□□□ -1.36
SSBP3-213ENST00000530618 CDCA7Q9BWT1 371 aaPredicted RBP6.56□□□□□ -1.36
SSBP3-213ENST00000530618 SLC12A5Q9H2X9 1139 aa6.56□□□□□ -1.36
SSBP3-213ENST00000530618 TERF2IPQ9NYB0 399 aa6.56□□□□□ -1.36
SSBP3-213ENST00000530618 SOX12O15370 315 aa6.55□□□□□ -1.36
SSBP3-213ENST00000530618 NBPF14Q5TI25 921 aa6.55□□□□□ -1.36
SSBP3-213ENST00000530618 TMC1Q8TDI8 760 aa6.55□□□□□ -1.36
SSBP3-213ENST00000530618 SPON1Q9HCB6 807 aa6.55□□□□□ -1.36
SSBP3-213ENST00000530618 LRRC4BQ9NT99 713 aa6.55□□□□□ -1.36
SSBP3-213ENST00000530618 PCDH10Q9P2E7 1040 aa6.55□□□□□ -1.36
SSBP3-213ENST00000530618 NCAPD2Q15021 1401 aa6.55□□□□□ -1.36
SSBP3-213ENST00000530618 UBR3Q6ZT12 1888 aa6.55□□□□□ -1.36
SSBP3-213ENST00000530618 SLC15A2Q16348 729 aa6.54□□□□□ -1.36
SSBP3-213ENST00000530618 ZNF827Q17R98 1081 aa6.54□□□□□ -1.36
SSBP3-213ENST00000530618 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.54□□□□□ -1.36
SSBP3-213ENST00000530618 MAP3K5Q99683 1374 aa6.54□□□□□ -1.36
SSBP3-213ENST00000530618 ZBTB7AO95365 584 aa6.53□□□□□ -1.36
SSBP3-213ENST00000530618 FBLN1P23142 703 aa6.53□□□□□ -1.36
SSBP3-213ENST00000530618 ANKRD24Q8TF21 1146 aa6.53□□□□□ -1.36
SSBP3-213ENST00000530618 IP6K1Q92551 441 aa6.53□□□□□ -1.36
SSBP3-213ENST00000530618 AKT1S1Q96B36 256 aa6.53□□□□□ -1.36
SSBP3-213ENST00000530618 KIAA1551Q9HCM1 1747 aa6.53□□□□□ -1.36
SSBP3-213ENST00000530618 MAP3K19Q56UN5 1328 aa6.52□□□□□ -1.37
SSBP3-213ENST00000530618 EXOC5O00471 708 aa6.52□□□□□ -1.37
SSBP3-213ENST00000530618 POTEGQ6S5H5 508 aa6.52□□□□□ -1.37
SSBP3-213ENST00000530618 ACSBG1Q96GR2 724 aa6.52□□□□□ -1.37
SSBP3-213ENST00000530618 KNSTRNQ9Y448 316 aa6.52□□□□□ -1.37
SSBP3-213ENST00000530618 ANKRD36BQ8N2N9 1353 aa6.52□□□□□ -1.37
SSBP3-213ENST00000530618 KIF7Q2M1P5 1343 aa6.51□□□□□ -1.37
SSBP3-213ENST00000530618 CSB-PGBD3P0DP91 1061 aa6.51□□□□□ -1.37
SSBP3-213ENST00000530618 IL2RBP14784 551 aa6.51□□□□□ -1.37
SSBP3-213ENST00000530618 HOXC9P31274 260 aa6.51□□□□□ -1.37
SSBP3-213ENST00000530618 SYT17Q9BSW7 474 aa6.51□□□□□ -1.37
SSBP3-213ENST00000530618 ATF5Q9Y2D1 282 aaPredicted RBP6.51□□□□□ -1.37
SSBP3-213ENST00000530618 RTL1A6NKG5 1358 aa6.51□□□□□ -1.37
SSBP3-213ENST00000530618 CGNL1Q0VF96 1302 aa6.5□□□□□ -1.37
SSBP3-213ENST00000530618 PNPLA7Q6ZV29 1317 aa6.5□□□□□ -1.37
SSBP3-213ENST00000530618 C4BP0C0L5 1744 aa6.5□□□□□ -1.37
SSBP3-213ENST00000530618 COL5A3P25940 1745 aaPredicted RBP6.5□□□□□ -1.37
SSBP3-213ENST00000530618 VIRMAQ69YN4 1812 aaKnown RBP6.5□□□□□ -1.37
SSBP3-213ENST00000530618 KIF13BQ9NQT8 1826 aa6.5□□□□□ -1.37
SSBP3-213ENST00000530618 YY1P25490 414 aa6.5□□□□□ -1.37
SSBP3-213ENST00000530618 FHDC1Q9C0D6 1143 aaPredicted RBP6.5□□□□□ -1.37
SSBP3-213ENST00000530618 MTFR1LQ9H019 292 aa6.5□□□□□ -1.37
SSBP3-213ENST00000530618 NLRP2Q9NX02 1062 aa6.5□□□□□ -1.37
SSBP3-213ENST00000530618 STK32BQ9NY57 414 aa6.5□□□□□ -1.37
SSBP3-213ENST00000530618 WASHC2AQ641Q2 1341 aa6.5□□□□□ -1.37
SSBP3-213ENST00000530618 BRCA1P38398 1863 aaKnown RBP6.49□□□□□ -1.37
SSBP3-213ENST00000530618 ZNF831Q5JPB2 1677 aa6.49□□□□□ -1.37
SSBP3-213ENST00000530618 FYB1O15117 783 aa6.49□□□□□ -1.37
SSBP3-213ENST00000530618 PPP1R1BQ9UD71 204 aaPredicted RBP6.49□□□□□ -1.37
SSBP3-213ENST00000530618 MYH14Q7Z406 1995 aaKnown RBP6.49□□□□□ -1.37
SSBP3-213ENST00000530618 INSRP06213 1382 aa6.48□□□□□ -1.37
SSBP3-213ENST00000530618 ANP32CO43423 234 aa6.48□□□□□ -1.37
SSBP3-213ENST00000530618 KCNQ4P56696 695 aa6.48□□□□□ -1.37
SSBP3-213ENST00000530618 NBPF6Q5VWK0 638 aa6.48□□□□□ -1.37
SSBP3-213ENST00000530618 NBPF4Q96M43 638 aa6.48□□□□□ -1.37
SSBP3-213ENST00000530618 CARD14Q9BXL6 1004 aa6.48□□□□□ -1.37
SSBP3-213ENST00000530618 C4AP0C0L4 1744 aa6.47□□□□□ -1.37
SSBP3-213ENST00000530618 CICQ96RK0 1608 aaPredicted RBP6.47□□□□□ -1.37
SSBP3-213ENST00000530618 ADAMTS7Q9UKP4 1686 aa6.47□□□□□ -1.37
SSBP3-213ENST00000530618 PRIM1P49642 420 aaKnown RBP6.47□□□□□ -1.37
SSBP3-213ENST00000530618 DDX10Q13206 875 aaKnown RBP6.47□□□□□ -1.37
SSBP3-213ENST00000530618 RRS1Q15050 365 aaKnown RBP6.47□□□□□ -1.37
SSBP3-213ENST00000530618 SLC27A3Q5K4L6 730 aa6.47□□□□□ -1.37
SSBP3-213ENST00000530618 AMIGO3Q86WK7 504 aa6.47□□□□□ -1.37
SSBP3-213ENST00000530618 ZNF784Q8NCA9 323 aaPredicted RBP6.47□□□□□ -1.37
SSBP3-213ENST00000530618 COG3Q96JB2 828 aa6.47□□□□□ -1.37
SSBP3-213ENST00000530618 PANK3Q9H999 370 aa6.47□□□□□ -1.37
SSBP3-213ENST00000530618 KIF24Q5T7B8 1368 aa6.46□□□□□ -1.37
SSBP3-213ENST00000530618 CYP27B1O15528 508 aa6.46□□□□□ -1.38
SSBP3-213ENST00000530618 USHBP1Q8N6Y0 703 aa6.46□□□□□ -1.38
SSBP3-213ENST00000530618 DDX54Q8TDD1 881 aaKnown RBP6.46□□□□□ -1.38
SSBP3-213ENST00000530618 LTV1Q96GA3 475 aaPredicted RBP6.46□□□□□ -1.38
SSBP3-213ENST00000530618 ARXQ96QS3 562 aa6.46□□□□□ -1.38
SSBP3-213ENST00000530618 NSD3Q9BZ95 1437 aa6.46□□□□□ -1.38
SSBP3-213ENST00000530618 GGNBP2Q9H3C7 697 aa6.46□□□□□ -1.38
SSBP3-213ENST00000530618 FLT4P35916 1363 aa6.45□□□□□ -1.38
SSBP3-213ENST00000530618 NPC1L1Q9UHC9 1359 aa6.45□□□□□ -1.38
SSBP3-213ENST00000530618 TJP1Q07157 1748 aa6.45□□□□□ -1.38
SSBP3-213ENST00000530618 SMG6Q86US8 1419 aaKnown RBP6.45□□□□□ -1.38
SSBP3-213ENST00000530618 RALBP1Q15311 655 aa6.45□□□□□ -1.38
SSBP3-213ENST00000530618 HSP90AB2PQ58FF8 381 aa6.45□□□□□ -1.38
SSBP3-213ENST00000530618 NLGN2Q8NFZ4 835 aa6.45□□□□□ -1.38
SSBP3-213ENST00000530618 ZCRB1Q8TBF4 217 aaKnown RBP6.45□□□□□ -1.38
SSBP3-213ENST00000530618 SLC16A10Q8TF71 515 aa6.45□□□□□ -1.38
SSBP3-213ENST00000530618 PCNTO95613 3336 aa6.45□□□□□ -1.38
SSBP3-213ENST00000530618 N4BP2Q86UW6 1770 aaPredicted RBP6.44□□□□□ -1.38
SSBP3-213ENST00000530618 SCN11AQ9UI33 1791 aa6.44□□□□□ -1.38
SSBP3-213ENST00000530618 YBX3P16989 372 aaKnown RBP eCLIP6.44□□□□□ -1.38
SSBP3-213ENST00000530618 DIEXFQ68CQ4 756 aaKnown RBP6.44□□□□□ -1.38
SSBP3-213ENST00000530618 MORC1Q86VD1 984 aa6.44□□□□□ -1.38
SSBP3-213ENST00000530618 COL23A1Q86Y22 540 aaPredicted RBP6.44□□□□□ -1.38
SSBP3-213ENST00000530618 CFAP53Q96M91 514 aa6.44□□□□□ -1.38
SSBP3-213ENST00000530618 EMILIN1Q9Y6C2 1016 aa6.44□□□□□ -1.38
SSBP3-213ENST00000530618 ADCY9O60503 1353 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms