RNA–Protein interactions for RNA: ENST00000530563.1

TM9SF1-210, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 3

Gene TM9SF1, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-210ENST00000530563 EDC4Q6P2E9 1401 aaKnown RBP15.27■□□□□ 0.04
TM9SF1-210ENST00000530563 ATP10DQ9P241 1426 aa15.26■□□□□ 0.03
TM9SF1-210ENST00000530563 SYTL4Q96C24 671 aaPredicted RBP15.26■□□□□ 0.03
TM9SF1-210ENST00000530563 FAM208AQ9UK61 1670 aaKnown RBP15.25■□□□□ 0.03
TM9SF1-210ENST00000530563 LTV1Q96GA3 475 aaPredicted RBP15.25■□□□□ 0.03
TM9SF1-210ENST00000530563 CCNL1Q9UK58 526 aaPredicted RBP15.25■□□□□ 0.03
TM9SF1-210ENST00000530563 DOT1LQ8TEK3 1739 aa15.25■□□□□ 0.03
TM9SF1-210ENST00000530563 A0A1W2PP64 1363 aa15.24■□□□□ 0.03
TM9SF1-210ENST00000530563 ADCY9O60503 1353 aa15.24■□□□□ 0.03
TM9SF1-210ENST00000530563 ZCRB1Q8TBF4 217 aaKnown RBP15.24■□□□□ 0.03
TM9SF1-210ENST00000530563 TMC1Q8TDI8 760 aa15.24■□□□□ 0.03
TM9SF1-210ENST00000530563 MEGF6O75095 1541 aa15.23■□□□□ 0.03
TM9SF1-210ENST00000530563 MAP3K19Q56UN5 1328 aa15.23■□□□□ 0.03
TM9SF1-210ENST00000530563 FBLN1P23142 703 aa15.23■□□□□ 0.03
TM9SF1-210ENST00000530563 MSL1Q68DK7 614 aa15.23■□□□□ 0.03
TM9SF1-210ENST00000530563 HDGFL2Q7Z4V5 671 aaPredicted RBP15.23■□□□□ 0.03
TM9SF1-210ENST00000530563 CD2APQ9Y5K6 639 aa15.23■□□□□ 0.03
TM9SF1-210ENST00000530563 HOXC9P31274 260 aa15.22■□□□□ 0.03
TM9SF1-210ENST00000530563 PUS7Q96PZ0 661 aaKnown RBP15.21■□□□□ 0.03
TM9SF1-210ENST00000530563 TERF2IPQ9NYB0 399 aa15.21■□□□□ 0.03
TM9SF1-210ENST00000530563 MSH5O43196 834 aa15.2■□□□□ 0.02
TM9SF1-210ENST00000530563 HSPA6P17066 643 aa15.2■□□□□ 0.02
TM9SF1-210ENST00000530563 NBPF6Q5VWK0 638 aa15.2■□□□□ 0.02
TM9SF1-210ENST00000530563 AMIGO3Q86WK7 504 aa15.2■□□□□ 0.02
TM9SF1-210ENST00000530563 NBPF4Q96M43 638 aa15.2■□□□□ 0.02
TM9SF1-210ENST00000530563 RGPD2P0DJD1 1756 aa15.19■□□□□ 0.02
TM9SF1-210ENST00000530563 GPBP1L1Q9HC44 474 aaPredicted RBP15.19■□□□□ 0.02
TM9SF1-210ENST00000530563 USP47Q96K76 1375 aa15.19■□□□□ 0.02
TM9SF1-210ENST00000530563 NEUROD1Q13562 356 aa15.18■□□□□ 0.02
TM9SF1-210ENST00000530563 CARD11Q9BXL7 1154 aa15.17■□□□□ 0.02
TM9SF1-210ENST00000530563 C5P01031 1676 aa15.16■□□□□ 0.02
TM9SF1-210ENST00000530563 PCNTO95613 3336 aa15.16■□□□□ 0.02
TM9SF1-210ENST00000530563 AMPHP49418 695 aa15.16■□□□□ 0.02
TM9SF1-210ENST00000530563 FLAD1Q8NFF5 587 aa15.16■□□□□ 0.02
TM9SF1-210ENST00000530563 CGNL1Q0VF96 1302 aa15.16■□□□□ 0.02
TM9SF1-210ENST00000530563 KIF3CO14782 793 aa15.15■□□□□ 0.02
TM9SF1-210ENST00000530563 USHBP1Q8N6Y0 703 aa15.15■□□□□ 0.02
TM9SF1-210ENST00000530563 ZNF526Q8TF50 670 aaPredicted RBP15.15■□□□□ 0.02
TM9SF1-210ENST00000530563 COG3Q96JB2 828 aa15.15■□□□□ 0.02
TM9SF1-210ENST00000530563 SMIM5Q71RC9 77 aa15.14■□□□□ 0.01
TM9SF1-210ENST00000530563 TESK2Q96S53 571 aa15.14■□□□□ 0.01
TM9SF1-210ENST00000530563 TAF1LQ8IZX4 1826 aa15.14■□□□□ 0.01
TM9SF1-210ENST00000530563 TOGARAM1Q9Y4F4 1720 aa15.14■□□□□ 0.01
TM9SF1-210ENST00000530563 RTL1A6NKG5 1358 aa15.13■□□□□ 0.01
TM9SF1-210ENST00000530563 PALLDQ8WX93 1383 aa15.13■□□□□ 0.01
TM9SF1-210ENST00000530563 CYP27B1O15528 508 aa15.13■□□□□ 0.01
TM9SF1-210ENST00000530563 RRS1Q15050 365 aaKnown RBP15.13■□□□□ 0.01
TM9SF1-210ENST00000530563 IGSF1Q8N6C5 1336 aa15.13■□□□□ 0.01
TM9SF1-210ENST00000530563 FYB1O15117 783 aa15.11■□□□□ 0.01
TM9SF1-210ENST00000530563 DNAJC5GQ8N7S2 189 aa15.11■□□□□ 0.01
TM9SF1-210ENST00000530563 C4BP0C0L5 1744 aa15.11■□□□□ 0.01
TM9SF1-210ENST00000530563 HSP90AB2PQ58FF8 381 aa15.1■□□□□ 0.01
TM9SF1-210ENST00000530563 MPRIPQ6WCQ1 1025 aa15.1■□□□□ 0.01
TM9SF1-210ENST00000530563 RAPGEF4Q8WZA2 1011 aa15.1■□□□□ 0.01
TM9SF1-210ENST00000530563 WWC3Q9ULE0 1092 aa15.1■□□□□ 0.01
TM9SF1-210ENST00000530563 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.09■□□□□ 0.01
TM9SF1-210ENST00000530563 TATP17735 454 aaPredicted RBP15.09■□□□□ 0.01
TM9SF1-210ENST00000530563 HMGB2P26583 209 aaKnown RBP15.09■□□□□ 0.01
TM9SF1-210ENST00000530563 PIGBQ92521 554 aa15.09■□□□□ 0.01
TM9SF1-210ENST00000530563 UBR3Q6ZT12 1888 aa15.09■□□□□ 0.01
TM9SF1-210ENST00000530563 PCDH11XQ9BZA7 1347 aa15.09■□□□□ 0.01
TM9SF1-210ENST00000530563 PCDH11YQ9BZA8 1340 aa15.09■□□□□ 0.01
TM9SF1-210ENST00000530563 CICQ96RK0 1608 aaPredicted RBP15.08■□□□□ 0
TM9SF1-210ENST00000530563 NKX1-1Q15270 411 aaPredicted RBP15.08■□□□□ 0
TM9SF1-210ENST00000530563 INSRP06213 1382 aa15.08■□□□□ 0
TM9SF1-210ENST00000530563 MAP2P11137 1827 aaKnown RBP15.08■□□□□ 0
TM9SF1-210ENST00000530563 ST20-MTHFSA0A0A6YYL1 179 aa15.07■□□□□ 0
TM9SF1-210ENST00000530563 LINC00116Q8NCU8 138 aa15.07■□□□□ 0
TM9SF1-210ENST00000530563 SMARCC1Q92922 1105 aaPredicted RBP15.07■□□□□ 0
TM9SF1-210ENST00000530563 AK7Q96M32 723 aa15.07■□□□□ 0
TM9SF1-210ENST00000530563 GGNBP2Q9H3C7 697 aa15.07■□□□□ 0
TM9SF1-210ENST00000530563 PHF14O94880 888 aa15.06■□□□□ 0
TM9SF1-210ENST00000530563 SSFA2P28290 1259 aa15.06■□□□□ 0
TM9SF1-210ENST00000530563 ITGB4P16144 1822 aa15.06■□□□□ 0
TM9SF1-210ENST00000530563 NCAPD2Q15021 1401 aa15.05■□□□□ -0
TM9SF1-210ENST00000530563 KIAA1551Q9HCM1 1747 aa15.04■□□□□ -0
TM9SF1-210ENST00000530563 SMG6Q86US8 1419 aaKnown RBP15.04■□□□□ -0
TM9SF1-210ENST00000530563 LOC102724428A0A0B4J2F2 783 aa15.04■□□□□ -0
TM9SF1-210ENST00000530563 APLP1P51693 650 aa15.04■□□□□ -0
TM9SF1-210ENST00000530563 SIK1P57059 783 aa15.04■□□□□ -0
TM9SF1-210ENST00000530563 ITPK1Q13572 414 aa15.04■□□□□ -0
TM9SF1-210ENST00000530563 PXDNLA1KZ92 1463 aa15.03■□□□□ -0
TM9SF1-210ENST00000530563 NSD3Q9BZ95 1437 aa15.03■□□□□ -0
TM9SF1-210ENST00000530563 KIF24Q5T7B8 1368 aa15.03■□□□□ -0
TM9SF1-210ENST00000530563 TOMM70O94826 608 aa15.03■□□□□ -0
TM9SF1-210ENST00000530563 PKD1L3Q7Z443 1732 aa15.03■□□□□ -0
TM9SF1-210ENST00000530563 FLT4P35916 1363 aa15.02■□□□□ -0
TM9SF1-210ENST00000530563 ASAP1Q9ULH1 1129 aa15.02■□□□□ -0
TM9SF1-210ENST00000530563 MMP10P09238 476 aa15.01□□□□□ -0.01
TM9SF1-210ENST00000530563 KIF13BQ9NQT8 1826 aa15.01□□□□□ -0.01
TM9SF1-210ENST00000530563 NMRK2Q9NPI5 230 aa15□□□□□ -0.01
TM9SF1-210ENST00000530563 A0A0G2JLW4 131 aa14.99□□□□□ -0.01
TM9SF1-210ENST00000530563 GNPATO15228 680 aa14.99□□□□□ -0.01
TM9SF1-210ENST00000530563 TGFB2P61812 414 aa14.99□□□□□ -0.01
TM9SF1-210ENST00000530563 SLC4A9Q96Q91 983 aa14.99□□□□□ -0.01
TM9SF1-210ENST00000530563 ATG3Q9NT62 314 aa14.99□□□□□ -0.01
TM9SF1-210ENST00000530563 EMILIN1Q9Y6C2 1016 aa14.99□□□□□ -0.01
TM9SF1-210ENST00000530563 SLC24A1O60721 1099 aa14.98□□□□□ -0.01
TM9SF1-210ENST00000530563 KCNA3P22001 575 aa14.98□□□□□ -0.01
TM9SF1-210ENST00000530563 CARD14Q9BXL6 1004 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms