RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.06□□□□□ -0.16
SOX6-213ENST00000530378 UNC5CLQ8IV45 518 aa14.05□□□□□ -0.16
SOX6-213ENST00000530378 RAPGEF4Q8WZA2 1011 aa14.05□□□□□ -0.16
SOX6-213ENST00000530378 CARD10Q9BWT7 1032 aa14.05□□□□□ -0.16
SOX6-213ENST00000530378 MTHFSDQ2M296 383 aaKnown RBP14.04□□□□□ -0.16
SOX6-213ENST00000530378 PNNQ9H307 717 aaKnown RBP14.04□□□□□ -0.16
SOX6-213ENST00000530378 VIRMAQ69YN4 1812 aaKnown RBP14.04□□□□□ -0.16
SOX6-213ENST00000530378 TMPOP42166 694 aaKnown RBP14.04□□□□□ -0.16
SOX6-213ENST00000530378 PKD1L3Q7Z443 1732 aa14.03□□□□□ -0.16
SOX6-213ENST00000530378 SHANK3Q9BYB0 1731 aa14.03□□□□□ -0.16
SOX6-213ENST00000530378 TATP17735 454 aaPredicted RBP14.03□□□□□ -0.16
SOX6-213ENST00000530378 RIPK4P57078 832 aa14.03□□□□□ -0.16
SOX6-213ENST00000530378 NFE2L2Q16236 605 aa14.03□□□□□ -0.16
SOX6-213ENST00000530378 FNBP4Q8N3X1 1017 aaPredicted RBP14.03□□□□□ -0.16
SOX6-213ENST00000530378 ZBED9Q6R2W3 1325 aa14.02□□□□□ -0.16
SOX6-213ENST00000530378 POTEAQ6S8J7 498 aa14.02□□□□□ -0.16
SOX6-213ENST00000530378 THUMPD2Q9BTF0 503 aaKnown RBP14.02□□□□□ -0.16
SOX6-213ENST00000530378 SPATA31A1Q5TZJ5 1347 aa14.02□□□□□ -0.17
SOX6-213ENST00000530378 NPM3O75607 178 aaKnown RBP14.01□□□□□ -0.17
SOX6-213ENST00000530378 DCTN1Q14203 1278 aa14.01□□□□□ -0.17
SOX6-213ENST00000530378 ZNF530Q6P9A1 599 aaPredicted RBP14.01□□□□□ -0.17
SOX6-213ENST00000530378 SPATA31A5Q5VU36 1347 aa14.01□□□□□ -0.17
SOX6-213ENST00000530378 SPATA31A7Q8IWB4 1347 aa14.01□□□□□ -0.17
SOX6-213ENST00000530378 OVOS2A0A0G2JMS6 1433 aa14.01□□□□□ -0.17
SOX6-213ENST00000530378 IL2RBP14784 551 aa14.01□□□□□ -0.17
SOX6-213ENST00000530378 GLI3P10071 1580 aa14□□□□□ -0.17
SOX6-213ENST00000530378 LRRC37A3O60309 1634 aa13.99□□□□□ -0.17
SOX6-213ENST00000530378 A0A0G2JS52 829 aa13.99□□□□□ -0.17
SOX6-213ENST00000530378 MYT1Q01538 1121 aa13.99□□□□□ -0.17
SOX6-213ENST00000530378 VPS72Q15906 364 aa13.99□□□□□ -0.17
SOX6-213ENST00000530378 FAM98CQ17RN3 349 aaKnown RBP13.99□□□□□ -0.17
SOX6-213ENST00000530378 PLEKHO1Q53GL0 409 aaPredicted RBP13.99□□□□□ -0.17
SOX6-213ENST00000530378 MCM10Q7L590 875 aa13.99□□□□□ -0.17
SOX6-213ENST00000530378 TRIM35Q9UPQ4 493 aa13.99□□□□□ -0.17
SOX6-213ENST00000530378 DISP2A7MBM2 1401 aa13.99□□□□□ -0.17
SOX6-213ENST00000530378 GAS2L2Q8NHY3 880 aa13.99□□□□□ -0.17
SOX6-213ENST00000530378 CDCA7LQ96GN5 454 aa13.99□□□□□ -0.17
SOX6-213ENST00000530378 KAT6BQ8WYB5 2073 aa13.98□□□□□ -0.17
SOX6-213ENST00000530378 MAP3K5Q99683 1374 aa13.98□□□□□ -0.17
SOX6-213ENST00000530378 WWC1Q8IX03 1113 aa13.98□□□□□ -0.17
SOX6-213ENST00000530378 DDX54Q8TDD1 881 aaKnown RBP13.97□□□□□ -0.17
SOX6-213ENST00000530378 ATRNO75882 1429 aa13.97□□□□□ -0.17
SOX6-213ENST00000530378 C1orf141Q5JVX7 400 aa13.97□□□□□ -0.17
SOX6-213ENST00000530378 MPRIPQ6WCQ1 1025 aa13.97□□□□□ -0.17
SOX6-213ENST00000530378 ZCRB1Q8TBF4 217 aaKnown RBP13.97□□□□□ -0.17
SOX6-213ENST00000530378 GNAT3A8MTJ3 354 aa13.96□□□□□ -0.17
SOX6-213ENST00000530378 AMOTQ4VCS5 1084 aa13.96□□□□□ -0.17
SOX6-213ENST00000530378 SPINK5Q9NQ38 1064 aaPredicted RBP13.96□□□□□ -0.17
SOX6-213ENST00000530378 SPG7Q9UQ90 795 aa13.96□□□□□ -0.17
SOX6-213ENST00000530378 LAS1LQ9Y4W2 734 aaKnown RBP13.96□□□□□ -0.17
SOX6-213ENST00000530378 ZNF521Q96K83 1311 aa13.96□□□□□ -0.18
SOX6-213ENST00000530378 CYP27B1O15528 508 aa13.95□□□□□ -0.18
SOX6-213ENST00000530378 QTRT2Q9H974 415 aaKnown RBP13.95□□□□□ -0.18
SOX6-213ENST00000530378 TRPC5Q9UL62 973 aaPredicted RBP13.95□□□□□ -0.18
SOX6-213ENST00000530378 SCN11AQ9UI33 1791 aa13.95□□□□□ -0.18
SOX6-213ENST00000530378 TNS2Q63HR2 1409 aa13.95□□□□□ -0.18
SOX6-213ENST00000530378 RTF1Q92541 710 aaKnown RBP13.94□□□□□ -0.18
SOX6-213ENST00000530378 PCDH11XQ9BZA7 1347 aa13.94□□□□□ -0.18
SOX6-213ENST00000530378 PCDH11YQ9BZA8 1340 aa13.94□□□□□ -0.18
SOX6-213ENST00000530378 TOGARAM1Q9Y4F4 1720 aa13.94□□□□□ -0.18
SOX6-213ENST00000530378 THSD7AQ9UPZ6 1657 aa13.94□□□□□ -0.18
SOX6-213ENST00000530378 PHKG2P15735 406 aa13.94□□□□□ -0.18
SOX6-213ENST00000530378 GJD4Q96KN9 370 aaPredicted RBP13.94□□□□□ -0.18
SOX6-213ENST00000530378 LGR6Q9HBX8 967 aa13.94□□□□□ -0.18
SOX6-213ENST00000530378 KDM6AO15550 1401 aaPredicted RBP13.93□□□□□ -0.18
SOX6-213ENST00000530378 GOLGA2Q08379 1002 aa13.93□□□□□ -0.18
SOX6-213ENST00000530378 LMOD3Q0VAK6 560 aa13.93□□□□□ -0.18
SOX6-213ENST00000530378 CCDC27Q2M243 656 aa13.93□□□□□ -0.18
SOX6-213ENST00000530378 AKAP4Q5JQC9 854 aa13.93□□□□□ -0.18
SOX6-213ENST00000530378 THRAP3Q9Y2W1 955 aaKnown RBP13.93□□□□□ -0.18
SOX6-213ENST00000530378 DDB1Q16531 1140 aa13.92□□□□□ -0.18
SOX6-213ENST00000530378 IFNL2Q8IZJ0 200 aa13.92□□□□□ -0.18
SOX6-213ENST00000530378 IL17REQ8NFR9 667 aa13.92□□□□□ -0.18
SOX6-213ENST00000530378 TSR2Q969E8 191 aaKnown RBP13.92□□□□□ -0.18
SOX6-213ENST00000530378 BARGINQ6ZT62 677 aa13.92□□□□□ -0.18
SOX6-213ENST00000530378 MIS18AQ9NYP9 233 aa13.92□□□□□ -0.18
SOX6-213ENST00000530378 DOT1LQ8TEK3 1739 aa13.92□□□□□ -0.18
SOX6-213ENST00000530378 BRWD3Q6RI45 1802 aa13.92□□□□□ -0.18
SOX6-213ENST00000530378 EXOC5O00471 708 aa13.91□□□□□ -0.18
SOX6-213ENST00000530378 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.91□□□□□ -0.18
SOX6-213ENST00000530378 ADAMTS7Q9UKP4 1686 aa13.91□□□□□ -0.18
SOX6-213ENST00000530378 SIPA1L3O60292 1781 aaPredicted RBP13.91□□□□□ -0.18
SOX6-213ENST00000530378 RNMTO43148 476 aaKnown RBP13.9□□□□□ -0.18
SOX6-213ENST00000530378 ZNF772Q68DY9 489 aaPredicted RBP13.9□□□□□ -0.18
SOX6-213ENST00000530378 NGEFQ8N5V2 710 aa13.9□□□□□ -0.18
SOX6-213ENST00000530378 CENPBP07199 599 aaPredicted RBP13.9□□□□□ -0.18
SOX6-213ENST00000530378 FAM182BQ5T319 152 aa13.9□□□□□ -0.18
SOX6-213ENST00000530378 UPF1Q92900 1129 aaKnown RBP eCLIP13.9□□□□□ -0.18
SOX6-213ENST00000530378 EP400Q96L91 3159 aa13.9□□□□□ -0.18
SOX6-213ENST00000530378 CDCA7Q9BWT1 371 aaPredicted RBP13.9□□□□□ -0.18
SOX6-213ENST00000530378 ITGB4P16144 1822 aa13.89□□□□□ -0.19
SOX6-213ENST00000530378 SLFN5Q08AF3 891 aa13.89□□□□□ -0.19
SOX6-213ENST00000530378 WDR63Q8IWG1 891 aa13.89□□□□□ -0.19
SOX6-213ENST00000530378 PLEKHG2Q9H7P9 1386 aa13.88□□□□□ -0.19
SOX6-213ENST00000530378 FANCIQ9NVI1 1328 aa13.88□□□□□ -0.19
SOX6-213ENST00000530378 SEPT12Q8IYM1 358 aa13.88□□□□□ -0.19
SOX6-213ENST00000530378 MARCH10Q8NA82 808 aaPredicted RBP13.88□□□□□ -0.19
SOX6-213ENST00000530378 CEMIPQ8WUJ3 1361 aa13.88□□□□□ -0.19
SOX6-213ENST00000530378 E9PSI1 815 aa13.87□□□□□ -0.19
SOX6-213ENST00000530378 TEFQ10587 303 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms