RNA–Protein interactions for RNA: ENST00000530334.5

ACER3-208, Transcript of alkaline ceramidase 3, humanhuman

TSL 2

Gene ACER3, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-208ENST00000530334 PLA2R1Q13018 1463 aa9.62□□□□□ -0.87
ACER3-208ENST00000530334 TUSC1Q2TAM9 212 aa9.62□□□□□ -0.87
ACER3-208ENST00000530334 CLIP1P30622 1438 aa9.62□□□□□ -0.87
ACER3-208ENST00000530334 MYO5CQ9NQX4 1742 aa9.62□□□□□ -0.87
ACER3-208ENST00000530334 HOXA2O43364 376 aa9.61□□□□□ -0.87
ACER3-208ENST00000530334 GJA5P36382 358 aa9.61□□□□□ -0.87
ACER3-208ENST00000530334 CLK2P49760 499 aaKnown RBP9.61□□□□□ -0.87
ACER3-208ENST00000530334 KIFC2Q96AC6 838 aa9.61□□□□□ -0.87
ACER3-208ENST00000530334 PRDM9Q9NQV7 894 aa9.61□□□□□ -0.87
ACER3-208ENST00000530334 PROCA1Q8NCQ7 364 aaPredicted RBP9.6□□□□□ -0.87
ACER3-208ENST00000530334 POLR3EQ9NVU0 708 aa9.6□□□□□ -0.87
ACER3-208ENST00000530334 PTPRKQ15262 1439 aa9.59□□□□□ -0.87
ACER3-208ENST00000530334 C11orf95C9JLR9 678 aaPredicted RBP9.59□□□□□ -0.87
ACER3-208ENST00000530334 SPIRE2Q8WWL2 714 aa9.59□□□□□ -0.87
ACER3-208ENST00000530334 KIF14Q15058 1648 aa9.59□□□□□ -0.87
ACER3-208ENST00000530334 ABCA6Q8N139 1617 aa9.59□□□□□ -0.87
ACER3-208ENST00000530334 TCOF1Q13428 1488 aaKnown RBP9.59□□□□□ -0.87
ACER3-208ENST00000530334 TROQ12816 1431 aaPredicted RBP9.58□□□□□ -0.88
ACER3-208ENST00000530334 FMN1Q68DA7 1419 aa9.58□□□□□ -0.88
ACER3-208ENST00000530334 CPS1P31327 1500 aa9.58□□□□□ -0.88
ACER3-208ENST00000530334 SPTLC1O15269 473 aa9.57□□□□□ -0.88
ACER3-208ENST00000530334 SMPD1P17405 629 aa9.57□□□□□ -0.88
ACER3-208ENST00000530334 JUNDP17535 347 aa9.57□□□□□ -0.88
ACER3-208ENST00000530334 RETREG3Q86VR2 466 aa9.57□□□□□ -0.88
ACER3-208ENST00000530334 NUTM1Q86Y26 1132 aa9.57□□□□□ -0.88
ACER3-208ENST00000530334 MRGPRX2Q96LB1 330 aa9.57□□□□□ -0.88
ACER3-208ENST00000530334 ARXQ96QS3 562 aa9.57□□□□□ -0.88
ACER3-208ENST00000530334 MROH2AA6NES4 1674 aa9.57□□□□□ -0.88
ACER3-208ENST00000530334 SNRPBP14678 240 aaKnown RBP9.56□□□□□ -0.88
ACER3-208ENST00000530334 LORP23490 312 aaPredicted RBP9.56□□□□□ -0.88
ACER3-208ENST00000530334 PPP2R2DQ66LE6 453 aa9.56□□□□□ -0.88
ACER3-208ENST00000530334 GGT6Q6P531 493 aa9.56□□□□□ -0.88
ACER3-208ENST00000530334 RIC3Q7Z5B4 369 aa9.56□□□□□ -0.88
ACER3-208ENST00000530334 EEA1Q15075 1411 aa9.56□□□□□ -0.88
ACER3-208ENST00000530334 SPAG9O60271 1321 aaKnown RBP9.56□□□□□ -0.88
ACER3-208ENST00000530334 CEP170BQ9Y4F5 1589 aaPredicted RBP9.55□□□□□ -0.88
ACER3-208ENST00000530334 SHANK2Q9UPX8 1470 aa9.55□□□□□ -0.88
ACER3-208ENST00000530334 BANK1Q8NDB2 785 aa9.55□□□□□ -0.88
ACER3-208ENST00000530334 ZNF777Q9ULD5 760 aaPredicted RBP9.55□□□□□ -0.88
ACER3-208ENST00000530334 SPDYE5A6NIY4 337 aa9.54□□□□□ -0.88
ACER3-208ENST00000530334 A6NJR5 290 aa9.54□□□□□ -0.88
ACER3-208ENST00000530334 MCM6Q14566 821 aa9.54□□□□□ -0.88
ACER3-208ENST00000530334 RSBN1LQ6PCB5 846 aaPredicted RBP9.54□□□□□ -0.88
ACER3-208ENST00000530334 ANKLE2Q86XL3 938 aa9.54□□□□□ -0.88
ACER3-208ENST00000530334 LIMD1Q9UGP4 676 aa9.54□□□□□ -0.88
ACER3-208ENST00000530334 MYO3AQ8NEV4 1616 aa9.53□□□□□ -0.88
ACER3-208ENST00000530334 ZNF142P52746 1687 aaPredicted RBP9.53□□□□□ -0.88
ACER3-208ENST00000530334 INSM1Q01101 510 aaPredicted RBP9.53□□□□□ -0.88
ACER3-208ENST00000530334 TMEM259Q4ZIN3 620 aa9.53□□□□□ -0.88
ACER3-208ENST00000530334 RC3H1Q5TC82 1133 aaKnown RBP9.53□□□□□ -0.88
ACER3-208ENST00000530334 TRIM47Q96LD4 638 aa9.53□□□□□ -0.88
ACER3-208ENST00000530334 ATP13A2Q9NQ11 1180 aa9.53□□□□□ -0.88
ACER3-208ENST00000530334 A2ML1A8K2U0 1454 aa9.53□□□□□ -0.88
ACER3-208ENST00000530334 ABCC1P33527 1531 aa9.52□□□□□ -0.88
ACER3-208ENST00000530334 UBTFP17480 764 aaKnown RBP9.52□□□□□ -0.89
ACER3-208ENST00000530334 DESI1Q6ICB0 168 aa9.52□□□□□ -0.89
ACER3-208ENST00000530334 SUPT6HQ7KZ85 1726 aaKnown RBP9.52□□□□□ -0.89
ACER3-208ENST00000530334 THEMISQ8N1K5 641 aaPredicted RBP9.52□□□□□ -0.89
ACER3-208ENST00000530334 CCDC24Q8N4L8 307 aa9.52□□□□□ -0.89
ACER3-208ENST00000530334 KIDINS220Q9ULH0 1771 aa9.51□□□□□ -0.89
ACER3-208ENST00000530334 MOXD2PA6NHM9 499 aa9.51□□□□□ -0.89
ACER3-208ENST00000530334 TERTO14746 1132 aaKnown RBP9.51□□□□□ -0.89
ACER3-208ENST00000530334 RFC5P40937 340 aa9.51□□□□□ -0.89
ACER3-208ENST00000530334 NUDT12Q9BQG2 462 aa9.51□□□□□ -0.89
ACER3-208ENST00000530334 HNRNPMP52272 730 aaKnown RBP eCLIP9.5□□□□□ -0.891e-6■■■■■ 27.5
ACER3-208ENST00000530334 PRPF38BQ5VTL8 546 aaKnown RBP9.5□□□□□ -0.89
ACER3-208ENST00000530334 NPAS3Q8IXF0 933 aa9.5□□□□□ -0.89
ACER3-208ENST00000530334 MPNDQ8N594 471 aa9.5□□□□□ -0.89
ACER3-208ENST00000530334 CLTCQ00610 1675 aaKnown RBP9.5□□□□□ -0.89
ACER3-208ENST00000530334 ITSN2Q9NZM3 1697 aa9.49□□□□□ -0.89
ACER3-208ENST00000530334 A2MP01023 1474 aa9.49□□□□□ -0.89
ACER3-208ENST00000530334 CDC42BPBQ9Y5S2 1711 aa9.49□□□□□ -0.89
ACER3-208ENST00000530334 PTPRNQ16849 979 aa9.49□□□□□ -0.89
ACER3-208ENST00000530334 RGS17Q9UGC6 210 aaPredicted RBP9.49□□□□□ -0.89
ACER3-208ENST00000530334 SAMD9LQ8IVG5 1584 aa9.49□□□□□ -0.89
ACER3-208ENST00000530334 DNMT1P26358 1616 aaKnown RBP9.49□□□□□ -0.89
ACER3-208ENST00000530334 PREX2Q70Z35 1606 aa9.49□□□□□ -0.89
ACER3-208ENST00000530334 LILRB3O75022 631 aa9.48□□□□□ -0.89
ACER3-208ENST00000530334 FDX1P10109 184 aa9.48□□□□□ -0.89
ACER3-208ENST00000530334 TNRQ92752 1358 aa9.48□□□□□ -0.89
ACER3-208ENST00000530334 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.48□□□□□ -0.896e-7■■■□□ 19.2
ACER3-208ENST00000530334 CCNYL3P0C7X3 344 aa9.47□□□□□ -0.89
ACER3-208ENST00000530334 NPHP4O75161 1426 aaPredicted RBP9.47□□□□□ -0.89
ACER3-208ENST00000530334 J3QL48 77 aa9.46□□□□□ -0.9
ACER3-208ENST00000530334 NDUFV2P19404 249 aa9.46□□□□□ -0.9
ACER3-208ENST00000530334 FBXO31Q5XUX0 539 aaPredicted RBP9.46□□□□□ -0.9
ACER3-208ENST00000530334 EHBP1Q8NDI1 1231 aa9.46□□□□□ -0.9
ACER3-208ENST00000530334 ATP7AQ04656 1500 aa9.46□□□□□ -0.9
ACER3-208ENST00000530334 SKOR1P84550 965 aa9.45□□□□□ -0.9
ACER3-208ENST00000530334 POTEAQ6S8J7 498 aa9.45□□□□□ -0.9
ACER3-208ENST00000530334 SLC16A10Q8TF71 515 aa9.45□□□□□ -0.9
ACER3-208ENST00000530334 EVA1BQ9NVM1 165 aa9.45□□□□□ -0.9
ACER3-208ENST00000530334 CFDP1Q9UEE9 299 aaPredicted RBP9.45□□□□□ -0.9
ACER3-208ENST00000530334 PCDHB15Q9Y5E8 787 aa9.45□□□□□ -0.9
ACER3-208ENST00000530334 CCDC18Q5T9S5 1454 aa9.45□□□□□ -0.9
ACER3-208ENST00000530334 PLEKHH2Q8IVE3 1493 aa9.45□□□□□ -0.9
ACER3-208ENST00000530334 ARHGAP35Q9NRY4 1499 aa9.45□□□□□ -0.9
ACER3-208ENST00000530334 FAM135AQ9P2D6 1515 aa9.45□□□□□ -0.9
ACER3-208ENST00000530334 VWDEQ8N2E2 1590 aa9.45□□□□□ -0.9
ACER3-208ENST00000530334 NEURL4Q96JN8 1562 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms