RNA–Protein interactions for RNA: ENST00000530302.1

CLINT1-209, Transcript of clathrin interactor 1, humanhuman

TSL 2

Gene CLINT1, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-209ENST00000530302 NBPF4Q96M43 638 aa10.06□□□□□ -0.8
CLINT1-209ENST00000530302 POLKQ9UBT6 870 aa10.06□□□□□ -0.8
CLINT1-209ENST00000530302 KIF24Q5T7B8 1368 aa10.05□□□□□ -0.8
CLINT1-209ENST00000530302 PPM1GO15355 546 aaPredicted RBP10.05□□□□□ -0.8
CLINT1-209ENST00000530302 PDE3BQ13370 1112 aa10.05□□□□□ -0.8
CLINT1-209ENST00000530302 DDB1Q16531 1140 aa10.05□□□□□ -0.8
CLINT1-209ENST00000530302 LHX8Q68G74 356 aa10.05□□□□□ -0.8
CLINT1-209ENST00000530302 OVOS2A0A0G2JMS6 1433 aa10.05□□□□□ -0.8
CLINT1-209ENST00000530302 TRIM37O94972 964 aa10.04□□□□□ -0.8
CLINT1-209ENST00000530302 IL2RBP14784 551 aa10.04□□□□□ -0.8
CLINT1-209ENST00000530302 KNSTRNQ9Y448 316 aa10.04□□□□□ -0.8
CLINT1-209ENST00000530302 NCAPD2Q15021 1401 aa10.04□□□□□ -0.8
CLINT1-209ENST00000530302 FAM196AQ6ZSG2 479 aa10.03□□□□□ -0.8
CLINT1-209ENST00000530302 CDCA7Q9BWT1 371 aaPredicted RBP10.03□□□□□ -0.8
CLINT1-209ENST00000530302 NHSQ6T4R5 1651 aa10.02□□□□□ -0.8
CLINT1-209ENST00000530302 RREB1Q92766 1687 aa10.02□□□□□ -0.8
CLINT1-209ENST00000530302 PKD1L3Q7Z443 1732 aa10.02□□□□□ -0.8
CLINT1-209ENST00000530302 KAT6BQ8WYB5 2073 aa10.02□□□□□ -0.81
CLINT1-209ENST00000530302 CNGB1Q14028 1251 aaPredicted RBP10.02□□□□□ -0.81
CLINT1-209ENST00000530302 EIF4A2Q14240 407 aaKnown RBP10.02□□□□□ -0.81
CLINT1-209ENST00000530302 CC2D1BQ5T0F9 858 aaKnown RBP10.02□□□□□ -0.81
CLINT1-209ENST00000530302 MORC1Q86VD1 984 aa10.02□□□□□ -0.81
CLINT1-209ENST00000530302 CCDC125Q86Z20 511 aa10.02□□□□□ -0.81
CLINT1-209ENST00000530302 NUP188Q5SRE5 1749 aa10.02□□□□□ -0.81
CLINT1-209ENST00000530302 DOT1LQ8TEK3 1739 aa10.02□□□□□ -0.81
CLINT1-209ENST00000530302 BCL9O00512 1426 aa10.01□□□□□ -0.81
CLINT1-209ENST00000530302 EN1Q05925 392 aaPredicted RBP10.01□□□□□ -0.81
CLINT1-209ENST00000530302 AKT1S1Q96B36 256 aa10.01□□□□□ -0.81
CLINT1-209ENST00000530302 TOGARAM1Q9Y4F4 1720 aa10.01□□□□□ -0.81
CLINT1-209ENST00000530302 BTAF1O14981 1849 aa10□□□□□ -0.81
CLINT1-209ENST00000530302 SRCAPQ6ZRS2 3230 aa10□□□□□ -0.81
CLINT1-209ENST00000530302 EXOC5O00471 708 aa10□□□□□ -0.81
CLINT1-209ENST00000530302 EYA1Q99502 592 aa10□□□□□ -0.81
CLINT1-209ENST00000530302 NPC1L1Q9UHC9 1359 aa10□□□□□ -0.81
CLINT1-209ENST00000530302 COL3A1P02461 1466 aaPredicted RBP9.99□□□□□ -0.81
CLINT1-209ENST00000530302 RGPD3A6NKT7 1758 aaPredicted RBP9.99□□□□□ -0.81
CLINT1-209ENST00000530302 RGPD4Q7Z3J3 1758 aa9.99□□□□□ -0.81
CLINT1-209ENST00000530302 KCNQ2O43526 872 aa9.99□□□□□ -0.81
CLINT1-209ENST00000530302 SF3B2Q13435 895 aaKnown RBP9.99□□□□□ -0.81
CLINT1-209ENST00000530302 EZH2Q15910 746 aaKnown RBP9.99□□□□□ -0.81
CLINT1-209ENST00000530302 CAMKK2Q96RR4 588 aa9.99□□□□□ -0.81
CLINT1-209ENST00000530302 APBA3O96018 575 aa9.98□□□□□ -0.81
CLINT1-209ENST00000530302 SLC4A2P04920 1241 aa9.98□□□□□ -0.81
CLINT1-209ENST00000530302 BAG6P46379 1132 aa9.98□□□□□ -0.81
CLINT1-209ENST00000530302 DDX54Q8TDD1 881 aaKnown RBP9.98□□□□□ -0.81
CLINT1-209ENST00000530302 ACSBG1Q96GR2 724 aa9.98□□□□□ -0.81
CLINT1-209ENST00000530302 IGSF1Q8N6C5 1336 aa9.98□□□□□ -0.81
CLINT1-209ENST00000530302 MTHFSP49914 203 aa9.97□□□□□ -0.81
CLINT1-209ENST00000530302 AEBP1Q8IUX7 1158 aa9.97□□□□□ -0.81
CLINT1-209ENST00000530302 CYP27B1O15528 508 aa9.96□□□□□ -0.82
CLINT1-209ENST00000530302 TATP17735 454 aaPredicted RBP9.96□□□□□ -0.82
CLINT1-209ENST00000530302 IL13P35225 146 aa9.96□□□□□ -0.82
CLINT1-209ENST00000530302 FXR2P51116 673 aaKnown RBP eCLIP9.96□□□□□ -0.826e-6■□□□□ 10
CLINT1-209ENST00000530302 ZCRB1Q8TBF4 217 aaKnown RBP9.96□□□□□ -0.82
CLINT1-209ENST00000530302 RAPGEF4Q8WZA2 1011 aa9.96□□□□□ -0.82
CLINT1-209ENST00000530302 BCL11BQ9C0K0 894 aaPredicted RBP9.96□□□□□ -0.82
CLINT1-209ENST00000530302 ITGB4P16144 1822 aa9.96□□□□□ -0.82
CLINT1-209ENST00000530302 PAPPAQ13219 1627 aa9.94□□□□□ -0.82
CLINT1-209ENST00000530302 PROM2Q8N271 834 aa9.94□□□□□ -0.82
CLINT1-209ENST00000530302 KDRP35968 1356 aa9.93□□□□□ -0.82
CLINT1-209ENST00000530302 PARD3Q8TEW0 1356 aa9.93□□□□□ -0.82
CLINT1-209ENST00000530302 PCDH11XQ9BZA7 1347 aa9.93□□□□□ -0.82
CLINT1-209ENST00000530302 PCDH11YQ9BZA8 1340 aa9.93□□□□□ -0.82
CLINT1-209ENST00000530302 PSDA5PKW4 1024 aaPredicted RBP9.93□□□□□ -0.82
CLINT1-209ENST00000530302 REM2Q8IYK8 340 aaPredicted RBP9.93□□□□□ -0.82
CLINT1-209ENST00000530302 ANO8Q9HCE9 1232 aaPredicted RBP9.93□□□□□ -0.82
CLINT1-209ENST00000530302 LY75O60449 1722 aa9.93□□□□□ -0.82
CLINT1-209ENST00000530302 PPP2R1AP30153 589 aa9.92□□□□□ -0.82
CLINT1-209ENST00000530302 PRIM1P49642 420 aaKnown RBP9.92□□□□□ -0.82
CLINT1-209ENST00000530302 DDX10Q13206 875 aaKnown RBP9.92□□□□□ -0.82
CLINT1-209ENST00000530302 KDM6AO15550 1401 aaPredicted RBP9.91□□□□□ -0.82
CLINT1-209ENST00000530302 VIRMAQ69YN4 1812 aaKnown RBP9.91□□□□□ -0.82
CLINT1-209ENST00000530302 PLSCR1O15162 318 aa9.91□□□□□ -0.82
CLINT1-209ENST00000530302 HMOX1P09601 288 aa9.91□□□□□ -0.82
CLINT1-209ENST00000530302 SULT6B1Q6IMI4 303 aa9.91□□□□□ -0.82
CLINT1-209ENST00000530302 SYTL4Q96C24 671 aaPredicted RBP9.91□□□□□ -0.82
CLINT1-209ENST00000530302 TUBGCP6Q96RT7 1819 aa9.91□□□□□ -0.82
CLINT1-209ENST00000530302 PHKG2P15735 406 aa9.9□□□□□ -0.82
CLINT1-209ENST00000530302 ZEB1P37275 1124 aaPredicted RBP9.9□□□□□ -0.82
CLINT1-209ENST00000530302 KCNQ4P56696 695 aa9.9□□□□□ -0.82
CLINT1-209ENST00000530302 R3HDM1Q15032 1099 aaKnown RBP9.9□□□□□ -0.82
CLINT1-209ENST00000530302 TXNRD1Q16881 649 aa9.9□□□□□ -0.82
CLINT1-209ENST00000530302 PLEKHG2Q9H7P9 1386 aa9.89□□□□□ -0.83
CLINT1-209ENST00000530302 CASZ1Q86V15 1759 aa9.89□□□□□ -0.83
CLINT1-209ENST00000530302 SCN11AQ9UI33 1791 aa9.89□□□□□ -0.83
CLINT1-209ENST00000530302 DIAPH1O60610 1272 aaKnown RBP9.89□□□□□ -0.83
CLINT1-209ENST00000530302 NKX1-1Q15270 411 aaPredicted RBP9.89□□□□□ -0.83
CLINT1-209ENST00000530302 LRRC4BQ9NT99 713 aa9.89□□□□□ -0.83
CLINT1-209ENST00000530302 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.89□□□□□ -0.832e-12■□□□□ 9.7
CLINT1-209ENST00000530302 SPG7Q9UQ90 795 aa9.89□□□□□ -0.83
CLINT1-209ENST00000530302 POLA2Q14181 598 aa9.88□□□□□ -0.83
CLINT1-209ENST00000530302 ZNF530Q6P9A1 599 aaPredicted RBP9.88□□□□□ -0.83
CLINT1-209ENST00000530302 PDGFDQ9GZP0 370 aaPredicted RBP9.88□□□□□ -0.83
CLINT1-209ENST00000530302 TAF1LQ8IZX4 1826 aa9.88□□□□□ -0.83
CLINT1-209ENST00000530302 ADAMTS7Q9UKP4 1686 aa9.87□□□□□ -0.83
CLINT1-209ENST00000530302 LRP5O75197 1615 aa9.87□□□□□ -0.83
CLINT1-209ENST00000530302 ZNF827Q17R98 1081 aa9.87□□□□□ -0.83
CLINT1-209ENST00000530302 MPRIPQ6WCQ1 1025 aa9.87□□□□□ -0.83
CLINT1-209ENST00000530302 C5P01031 1676 aa9.87□□□□□ -0.83
CLINT1-209ENST00000530302 U2SURPO15042 1029 aaKnown RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms