RNA–Protein interactions for RNA: ENST00000530278.5

NFRKB-207, Transcript of nuclear factor related to kappaB binding protein, humanhuman

TSL 3

Gene NFRKB, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFRKB-207ENST00000530278 SHANK3Q9BYB0 1731 aa29.97■■■□□ 2.39
NFRKB-207ENST00000530278 PSDA5PKW4 1024 aaPredicted RBP29.97■■■□□ 2.39
NFRKB-207ENST00000530278 PLSCR1O15162 318 aa29.97■■■□□ 2.39
NFRKB-207ENST00000530278 NUP188Q5SRE5 1749 aa29.96■■■□□ 2.39
NFRKB-207ENST00000530278 PER1O15534 1290 aaPredicted RBP29.95■■■□□ 2.39
NFRKB-207ENST00000530278 RGPD3A6NKT7 1758 aaPredicted RBP29.95■■■□□ 2.38
NFRKB-207ENST00000530278 RGPD4Q7Z3J3 1758 aa29.95■■■□□ 2.38
NFRKB-207ENST00000530278 EIF4A2Q14240 407 aaKnown RBP29.94■■■□□ 2.38
NFRKB-207ENST00000530278 EYA1Q99502 592 aa29.94■■■□□ 2.38
NFRKB-207ENST00000530278 R3HDM1Q15032 1099 aaKnown RBP29.92■■■□□ 2.38
NFRKB-207ENST00000530278 CC2D1BQ5T0F9 858 aaKnown RBP29.92■■■□□ 2.38
NFRKB-207ENST00000530278 NCAPD2Q15021 1401 aa29.91■■■□□ 2.38
NFRKB-207ENST00000530278 CNGB1Q14028 1251 aaPredicted RBP29.9■■■□□ 2.38
NFRKB-207ENST00000530278 KAT6BQ8WYB5 2073 aa29.89■■■□□ 2.38
NFRKB-207ENST00000530278 SRCAPQ6ZRS2 3230 aa29.88■■■□□ 2.37
NFRKB-207ENST00000530278 NBPF14Q5TI25 921 aa29.88■■■□□ 2.37
NFRKB-207ENST00000530278 DOT1LQ8TEK3 1739 aa29.88■■■□□ 2.37
NFRKB-207ENST00000530278 BTAF1O14981 1849 aa29.87■■■□□ 2.37
NFRKB-207ENST00000530278 SYTL4Q96C24 671 aaPredicted RBP29.86■■■□□ 2.37
NFRKB-207ENST00000530278 PCDH11XQ9BZA7 1347 aa29.86■■■□□ 2.37
NFRKB-207ENST00000530278 PCDH11YQ9BZA8 1340 aa29.86■■■□□ 2.37
NFRKB-207ENST00000530278 PROM2Q8N271 834 aa29.84■■■□□ 2.37
NFRKB-207ENST00000530278 PKD1L3Q7Z443 1732 aa29.84■■■□□ 2.37
NFRKB-207ENST00000530278 PRIM1P49642 420 aaKnown RBP29.83■■■□□ 2.37
NFRKB-207ENST00000530278 TXNRD1Q16881 649 aa29.83■■■□□ 2.37
NFRKB-207ENST00000530278 IGSF1Q8N6C5 1336 aa29.82■■■□□ 2.36
NFRKB-207ENST00000530278 SPG7Q9UQ90 795 aa29.81■■■□□ 2.36
NFRKB-207ENST00000530278 NPC1L1Q9UHC9 1359 aa29.8■■■□□ 2.36
NFRKB-207ENST00000530278 CYP27B1O15528 508 aa29.8■■■□□ 2.36
NFRKB-207ENST00000530278 MTHFSP49914 203 aa29.8■■■□□ 2.36
NFRKB-207ENST00000530278 ANO8Q9HCE9 1232 aaPredicted RBP29.77■■■□□ 2.36
NFRKB-207ENST00000530278 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.75■■■□□ 2.359e-8■■□□□ 12.3
NFRKB-207ENST00000530278 IL13P35225 146 aa29.74■■■□□ 2.35
NFRKB-207ENST00000530278 AEBP1Q8IUX7 1158 aa29.72■■■□□ 2.35
NFRKB-207ENST00000530278 TOGARAM1Q9Y4F4 1720 aa29.71■■■□□ 2.35
NFRKB-207ENST00000530278 SULT6B1Q6IMI4 303 aa29.71■■■□□ 2.35
NFRKB-207ENST00000530278 LRP5O75197 1615 aa29.71■■■□□ 2.35
NFRKB-207ENST00000530278 IFNL2Q8IZJ0 200 aa29.7■■■□□ 2.35
NFRKB-207ENST00000530278 STK32BQ9NY57 414 aa29.7■■■□□ 2.35
NFRKB-207ENST00000530278 PHKG2P15735 406 aa29.69■■■□□ 2.34
NFRKB-207ENST00000530278 NKX1-1Q15270 411 aaPredicted RBP29.69■■■□□ 2.34
NFRKB-207ENST00000530278 PLEKHG2Q9H7P9 1386 aa29.68■■■□□ 2.34
NFRKB-207ENST00000530278 MPRIPQ6WCQ1 1025 aa29.68■■■□□ 2.34
NFRKB-207ENST00000530278 LRRC4BQ9NT99 713 aa29.68■■■□□ 2.34
NFRKB-207ENST00000530278 PLEKHO1Q53GL0 409 aaPredicted RBP29.67■■■□□ 2.34
NFRKB-207ENST00000530278 ITGB4P16144 1822 aa29.66■■■□□ 2.34
NFRKB-207ENST00000530278 DIAPH1O60610 1272 aaKnown RBP29.66■■■□□ 2.34
NFRKB-207ENST00000530278 SLC15A2Q16348 729 aa29.66■■■□□ 2.34
NFRKB-207ENST00000530278 LY75O60449 1722 aa29.65■■■□□ 2.34
NFRKB-207ENST00000530278 PAPPAQ13219 1627 aa29.65■■■□□ 2.34
NFRKB-207ENST00000530278 SLC27A3Q5K4L6 730 aa29.65■■■□□ 2.34
NFRKB-207ENST00000530278 KCNQ4P56696 695 aa29.64■■■□□ 2.34
NFRKB-207ENST00000530278 KDRP35968 1356 aa29.64■■■□□ 2.33
NFRKB-207ENST00000530278 AMOTQ4VCS5 1084 aa29.63■■■□□ 2.33
NFRKB-207ENST00000530278 ZNF530Q6P9A1 599 aaPredicted RBP29.63■■■□□ 2.33
NFRKB-207ENST00000530278 HMOX1P09601 288 aa29.62■■■□□ 2.33
NFRKB-207ENST00000530278 CCNL1Q9UK58 526 aaPredicted RBP29.61■■■□□ 2.33
NFRKB-207ENST00000530278 PIGBQ92521 554 aa29.6■■■□□ 2.33
NFRKB-207ENST00000530278 PDGFDQ9GZP0 370 aaPredicted RBP29.6■■■□□ 2.33
NFRKB-207ENST00000530278 COL3A1P02461 1466 aaPredicted RBP29.6■■■□□ 2.33
NFRKB-207ENST00000530278 CASZ1Q86V15 1759 aa29.59■■■□□ 2.33
NFRKB-207ENST00000530278 ZNF827Q17R98 1081 aa29.59■■■□□ 2.33
NFRKB-207ENST00000530278 TMOD3Q9NYL9 352 aa29.59■■■□□ 2.33
NFRKB-207ENST00000530278 PALLDQ8WX93 1383 aa29.58■■■□□ 2.33
NFRKB-207ENST00000530278 HSP90AB1P08238 724 aaKnown RBP29.57■■■□□ 2.32
NFRKB-207ENST00000530278 C1orf141Q5JVX7 400 aa29.57■■■□□ 2.32
NFRKB-207ENST00000530278 U2SURPO15042 1029 aaKnown RBP29.56■■■□□ 2.32
NFRKB-207ENST00000530278 PPP2R1AP30153 589 aa29.56■■■□□ 2.32
NFRKB-207ENST00000530278 CFAP53Q96M91 514 aa29.56■■■□□ 2.32
NFRKB-207ENST00000530278 SMARCC1Q92922 1105 aaPredicted RBP29.55■■■□□ 2.32
NFRKB-207ENST00000530278 DCAF5Q96JK2 942 aa29.55■■■□□ 2.32
NFRKB-207ENST00000530278 SPON1Q9HCB6 807 aa29.55■■■□□ 2.32
NFRKB-207ENST00000530278 AKT1S1Q96B36 256 aa29.54■■■□□ 2.32
NFRKB-207ENST00000530278 ZBTB7AO95365 584 aa29.53■■■□□ 2.32
NFRKB-207ENST00000530278 KDM6AO15550 1401 aaPredicted RBP29.52■■■□□ 2.32
NFRKB-207ENST00000530278 ERVV-2B6SEH9 535 aa29.51■■■□□ 2.31
NFRKB-207ENST00000530278 ZEB1P37275 1124 aaPredicted RBP29.5■■■□□ 2.31
NFRKB-207ENST00000530278 TFCP2L1Q9NZI6 479 aa29.5■■■□□ 2.31
NFRKB-207ENST00000530278 ASAP1Q9ULH1 1129 aa29.5■■■□□ 2.31
NFRKB-207ENST00000530278 DDX10Q13206 875 aaKnown RBP29.49■■■□□ 2.31
NFRKB-207ENST00000530278 C5P01031 1676 aa29.49■■■□□ 2.31
NFRKB-207ENST00000530278 AKAP4Q5JQC9 854 aa29.48■■■□□ 2.31
NFRKB-207ENST00000530278 ATF5Q9Y2D1 282 aaPredicted RBP29.48■■■□□ 2.31
NFRKB-207ENST00000530278 TUBGCP6Q96RT7 1819 aa29.48■■■□□ 2.31
NFRKB-207ENST00000530278 CABP4P57796 275 aa29.47■■■□□ 2.31
NFRKB-207ENST00000530278 QSER1Q2KHR3 1735 aa29.47■■■□□ 2.31
NFRKB-207ENST00000530278 TAF1LQ8IZX4 1826 aa29.46■■■□□ 2.31
NFRKB-207ENST00000530278 ATG3Q9NT62 314 aa29.46■■■□□ 2.31
NFRKB-207ENST00000530278 PPP1R1BQ9UD71 204 aaPredicted RBP29.46■■■□□ 2.31
NFRKB-207ENST00000530278 MTHFSDQ2M296 383 aaKnown RBP29.45■■■□□ 2.31
NFRKB-207ENST00000530278 NUDCQ9Y266 331 aa29.45■■■□□ 2.31
NFRKB-207ENST00000530278 PNPLA7Q6ZV29 1317 aa29.45■■■□□ 2.3
NFRKB-207ENST00000530278 LOC102724428A0A0B4J2F2 783 aa29.44■■■□□ 2.3
NFRKB-207ENST00000530278 SIK1P57059 783 aa29.44■■■□□ 2.3
NFRKB-207ENST00000530278 MTFR1LQ9H019 292 aa29.43■■■□□ 2.3
NFRKB-207ENST00000530278 SCN11AQ9UI33 1791 aa29.43■■■□□ 2.3
NFRKB-207ENST00000530278 HMGB2P26583 209 aaKnown RBP29.42■■■□□ 2.3
NFRKB-207ENST00000530278 C4BP0C0L5 1744 aa29.4■■■□□ 2.3
NFRKB-207ENST00000530278 NFATC2IPQ8NCF5 419 aa29.4■■■□□ 2.3
NFRKB-207ENST00000530278 LGR6Q9HBX8 967 aa29.4■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms