RNA–Protein interactions for RNA: ENST00000530075.1

GMDS-206, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 402 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-206ENST00000530075 ST8SIA5O15466 376 aa10.17□□□□□ -0.78
GMDS-206ENST00000530075 USP4Q13107 963 aa10.17□□□□□ -0.78
GMDS-206ENST00000530075 EML3Q32P44 896 aa10.17□□□□□ -0.78
GMDS-206ENST00000530075 Q6ZVU0 165 aa10.17□□□□□ -0.78
GMDS-206ENST00000530075 LCE2BO14633 110 aa10.16□□□□□ -0.78
GMDS-206ENST00000530075 STAU1O95793 577 aaKnown RBP10.16□□□□□ -0.78
GMDS-206ENST00000530075 AGBL1Q96MI9 1066 aa10.16□□□□□ -0.78
GMDS-206ENST00000530075 MKRN1Q9UHC7 482 aaKnown RBP10.16□□□□□ -0.78
GMDS-206ENST00000530075 LZTS3O60299 673 aaPredicted RBP10.15□□□□□ -0.78
GMDS-206ENST00000530075 AAASQ9NRG9 546 aa10.15□□□□□ -0.78
GMDS-206ENST00000530075 DACH1Q9UI36 760 aa10.15□□□□□ -0.78
GMDS-206ENST00000530075 PCDHGA11Q9Y5H2 935 aa10.15□□□□□ -0.78
GMDS-206ENST00000530075 MYCP01106 439 aaPredicted RBP10.14□□□□□ -0.79
GMDS-206ENST00000530075 SMCPP49901 116 aaPredicted RBP10.14□□□□□ -0.79
GMDS-206ENST00000530075 NOD1Q9Y239 953 aa10.14□□□□□ -0.79
GMDS-206ENST00000530075 BMP1P13497 986 aa10.13□□□□□ -0.79
GMDS-206ENST00000530075 CLDN10P78369 228 aa10.13□□□□□ -0.79
GMDS-206ENST00000530075 CTC1Q2NKJ3 1217 aa10.13□□□□□ -0.79
GMDS-206ENST00000530075 CRIPAKQ8N1N5 446 aa10.13□□□□□ -0.79
GMDS-206ENST00000530075 MEIOBQ8N635 442 aa10.13□□□□□ -0.79
GMDS-206ENST00000530075 KIAA1024Q9UPX6 916 aa10.13□□□□□ -0.79
GMDS-206ENST00000530075 ZBTB7BO15156 539 aaPredicted RBP10.12□□□□□ -0.79
GMDS-206ENST00000530075 AXIN1O15169 862 aa10.12□□□□□ -0.79
GMDS-206ENST00000530075 ADH1AP07327 375 aa10.12□□□□□ -0.79
GMDS-206ENST00000530075 GTF2IP78347 998 aa10.12□□□□□ -0.79
GMDS-206ENST00000530075 VRTNQ9H8Y1 702 aa10.12□□□□□ -0.79
GMDS-206ENST00000530075 RELBQ01201 579 aa10.11□□□□□ -0.79
GMDS-206ENST00000530075 CRTC2Q53ET0 693 aaPredicted RBP10.11□□□□□ -0.79
GMDS-206ENST00000530075 Q6ZNB5 142 aa10.11□□□□□ -0.79
GMDS-206ENST00000530075 TRIM46Q7Z4K8 759 aa10.11□□□□□ -0.79
GMDS-206ENST00000530075 SIRT1Q96EB6 747 aa10.11□□□□□ -0.79
GMDS-206ENST00000530075 ESF1Q9H501 851 aaKnown RBP10.11□□□□□ -0.79
GMDS-206ENST00000530075 ATP5J2-PTCD1G3V325 749 aa10.1□□□□□ -0.79
GMDS-206ENST00000530075 OGFOD1Q8N543 542 aa10.1□□□□□ -0.79
GMDS-206ENST00000530075 ZNF395Q9H8N7 513 aaPredicted RBP10.1□□□□□ -0.79
GMDS-206ENST00000530075 RASA1P20936 1047 aa10.09□□□□□ -0.79
GMDS-206ENST00000530075 PTGIRP43119 386 aa10.09□□□□□ -0.79
GMDS-206ENST00000530075 PBXIP1Q96AQ6 731 aa10.09□□□□□ -0.79
GMDS-206ENST00000530075 RAB6BQ9NRW1 208 aa10.09□□□□□ -0.79
GMDS-206ENST00000530075 DKK1O94907 266 aa10.08□□□□□ -0.8
GMDS-206ENST00000530075 MRPL14Q6P1L8 145 aaKnown RBP10.08□□□□□ -0.8
GMDS-206ENST00000530075 CYP2U1Q7Z449 544 aa10.08□□□□□ -0.8
GMDS-206ENST00000530075 LINC00528Q8N1L1 170 aa10.08□□□□□ -0.8
GMDS-206ENST00000530075 ZNF594Q96JF6 807 aaPredicted RBP10.08□□□□□ -0.8
GMDS-206ENST00000530075 ARHGEF10LQ9HCE6 1279 aa10.08□□□□□ -0.8
GMDS-206ENST00000530075 DNAAF2Q9NVR5 837 aaKnown RBP10.08□□□□□ -0.8
GMDS-206ENST00000530075 A0A1W2PRU2 124 aa10.07□□□□□ -0.8
GMDS-206ENST00000530075 SCNN1DP51172 638 aa10.07□□□□□ -0.8
GMDS-206ENST00000530075 PTK7Q13308 1070 aa10.07□□□□□ -0.8
GMDS-206ENST00000530075 C6orf118Q5T5N4 469 aa10.07□□□□□ -0.8
GMDS-206ENST00000530075 TRIM50Q86XT4 487 aa10.07□□□□□ -0.8
GMDS-206ENST00000530075 TRIM52Q96A61 297 aa10.07□□□□□ -0.8
GMDS-206ENST00000530075 PURBQ96QR8 312 aaKnown RBP10.07□□□□□ -0.8
GMDS-206ENST00000530075 ETNK1Q9HBU6 452 aa10.07□□□□□ -0.8
GMDS-206ENST00000530075 TMEM229AB2RXF0 380 aa10.06□□□□□ -0.8
GMDS-206ENST00000530075 GNRH1P01148 92 aa10.06□□□□□ -0.8
GMDS-206ENST00000530075 TSEN34Q9BSV6 310 aaKnown RBP10.06□□□□□ -0.8
GMDS-206ENST00000530075 ATP13A2Q9NQ11 1180 aa10.06□□□□□ -0.8
GMDS-206ENST00000530075 USP17L15C9J2P7 530 aa10.05□□□□□ -0.8
GMDS-206ENST00000530075 USP17L10C9JJH3 530 aa10.05□□□□□ -0.8
GMDS-206ENST00000530075 USP17L13C9JLJ4 530 aa10.05□□□□□ -0.8
GMDS-206ENST00000530075 USP17L12C9JPN9 530 aa10.05□□□□□ -0.8
GMDS-206ENST00000530075 USP17L11C9JVI0 530 aa10.05□□□□□ -0.8
GMDS-206ENST00000530075 USP17L21D6R901 530 aa10.05□□□□□ -0.8
GMDS-206ENST00000530075 USP17L18D6R9N7 530 aa10.05□□□□□ -0.8
GMDS-206ENST00000530075 USP17L22D6RA61 530 aa10.05□□□□□ -0.8
GMDS-206ENST00000530075 USP17L17D6RBQ6 530 aa10.05□□□□□ -0.8
GMDS-206ENST00000530075 USP17L19D6RCP7 530 aa10.05□□□□□ -0.8
GMDS-206ENST00000530075 USP17L20D6RJB6 530 aa10.05□□□□□ -0.8
GMDS-206ENST00000530075 IL2RAP01589 272 aa10.05□□□□□ -0.8
GMDS-206ENST00000530075 ATP1A2P50993 1020 aa10.05□□□□□ -0.8
GMDS-206ENST00000530075 PSME1Q06323 249 aa10.05□□□□□ -0.8
GMDS-206ENST00000530075 USP17L24Q0WX57 530 aa10.05□□□□□ -0.8
GMDS-206ENST00000530075 LARP1Q6PKG0 1096 aaKnown RBP10.05□□□□□ -0.8
GMDS-206ENST00000530075 LARGE2Q8N3Y3 721 aa10.05□□□□□ -0.8
GMDS-206ENST00000530075 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.05□□□□□ -0.8
GMDS-206ENST00000530075 TPCN2Q8NHX9 752 aa10.05□□□□□ -0.8
GMDS-206ENST00000530075 ZFP42Q96MM3 310 aa10.05□□□□□ -0.8
GMDS-206ENST00000530075 INSM2Q96T92 566 aaPredicted RBP10.05□□□□□ -0.8
GMDS-206ENST00000530075 FAM196BA6NMK8 535 aa10.04□□□□□ -0.8
GMDS-206ENST00000530075 SPINT1O43278 529 aa10.04□□□□□ -0.8
GMDS-206ENST00000530075 BMP2P12643 396 aa10.04□□□□□ -0.8
GMDS-206ENST00000530075 GDF10P55107 478 aa10.04□□□□□ -0.8
GMDS-206ENST00000530075 CCDC102BQ68D86 513 aa10.04□□□□□ -0.8
GMDS-206ENST00000530075 ARXQ96QS3 562 aa10.04□□□□□ -0.8
GMDS-206ENST00000530075 CTSOP43234 321 aaPredicted RBP10.03□□□□□ -0.8
GMDS-206ENST00000530075 ZMIZ1Q9ULJ6 1067 aa10.03□□□□□ -0.8
GMDS-206ENST00000530075 SFI1A8K8P3 1242 aa10.02□□□□□ -0.81
GMDS-206ENST00000530075 MEN1O00255 615 aa10.02□□□□□ -0.81
GMDS-206ENST00000530075 UPP2O95045 317 aa10.02□□□□□ -0.81
GMDS-206ENST00000530075 ATG7O95352 703 aa10.02□□□□□ -0.81
GMDS-206ENST00000530075 INHAP05111 366 aa10.02□□□□□ -0.81
GMDS-206ENST00000530075 DPYDQ12882 1025 aa10.02□□□□□ -0.81
GMDS-206ENST00000530075 CLN3Q13286 438 aa10.02□□□□□ -0.81
GMDS-206ENST00000530075 SIX5Q8N196 739 aa10.02□□□□□ -0.81
GMDS-206ENST00000530075 CNKSR1Q969H4 720 aa10.02□□□□□ -0.81
GMDS-206ENST00000530075 XAGE2Q96GT9 111 aa10.02□□□□□ -0.81
GMDS-206ENST00000530075 ZNF358Q9NW07 568 aa10.02□□□□□ -0.81
GMDS-206ENST00000530075 SERTAD1Q9UHV2 236 aa10.02□□□□□ -0.81
GMDS-206ENST00000530075 HRH3Q9Y5N1 445 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms