RNA–Protein interactions for RNA: ENST00000530041.5

USP47-209, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 3

Gene USP47, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-209ENST00000530041 RNF135Q8IUD6 432 aa10.07□□□□□ -0.8
USP47-209ENST00000530041 SLC16A10Q8TF71 515 aa10.07□□□□□ -0.8
USP47-209ENST00000530041 CDCA7Q9BWT1 371 aaPredicted RBP10.07□□□□□ -0.8
USP47-209ENST00000530041 ESF1Q9H501 851 aaKnown RBP10.07□□□□□ -0.8
USP47-209ENST00000530041 TRAK2O60296 914 aa10.06□□□□□ -0.8
USP47-209ENST00000530041 OSBPL3Q9H4L5 887 aa10.06□□□□□ -0.8
USP47-209ENST00000530041 CHIC2Q9UKJ5 165 aa10.06□□□□□ -0.8
USP47-209ENST00000530041 H3BM21 787 aa10.05□□□□□ -0.8
USP47-209ENST00000530041 MYCP01106 439 aaPredicted RBP10.05□□□□□ -0.8
USP47-209ENST00000530041 TSGA10IPQ3SY00 556 aa10.05□□□□□ -0.8
USP47-209ENST00000530041 RNF217Q8TC41 542 aa10.05□□□□□ -0.8
USP47-209ENST00000530041 DOLKQ9UPQ8 538 aa10.05□□□□□ -0.8
USP47-209ENST00000530041 VEGFBP49765 207 aa10.04□□□□□ -0.8
USP47-209ENST00000530041 FOXD4L5Q5VV16 416 aaPredicted RBP10.04□□□□□ -0.8
USP47-209ENST00000530041 ALG2Q9H553 416 aa10.04□□□□□ -0.8
USP47-209ENST00000530041 A0A1W2PRU2 124 aa10.03□□□□□ -0.8
USP47-209ENST00000530041 RNF144AP50876 292 aaPredicted RBP10.02□□□□□ -0.81
USP47-209ENST00000530041 PTSQ03393 145 aa10.02□□□□□ -0.81
USP47-209ENST00000530041 USP4Q13107 963 aa10.02□□□□□ -0.81
USP47-209ENST00000530041 MAP7D1Q3KQU3 841 aa10.02□□□□□ -0.81
USP47-209ENST00000530041 LCE2CQ5TA81 110 aa10.02□□□□□ -0.81
USP47-209ENST00000530041 MEN1O00255 615 aa10.01□□□□□ -0.81
USP47-209ENST00000530041 GNRH1P01148 92 aa10.01□□□□□ -0.81
USP47-209ENST00000530041 GPC1P35052 558 aa10.01□□□□□ -0.81
USP47-209ENST00000530041 IRF7Q92985 503 aa10.01□□□□□ -0.81
USP47-209ENST00000530041 CLUAP1Q96AJ1 413 aa10.01□□□□□ -0.81
USP47-209ENST00000530041 PPFIA3O75145 1194 aa10□□□□□ -0.81
USP47-209ENST00000530041 CLN3Q13286 438 aa10□□□□□ -0.81
USP47-209ENST00000530041 PLPP7Q8NBV4 271 aa10□□□□□ -0.81
USP47-209ENST00000530041 SIRT1Q96EB6 747 aa10□□□□□ -0.81
USP47-209ENST00000530041 POM121CA8CG34 1229 aa9.99□□□□□ -0.81
USP47-209ENST00000530041 OXLD1Q5BKU9 147 aa9.99□□□□□ -0.81
USP47-209ENST00000530041 LYSMD3Q7Z3D4 306 aa9.99□□□□□ -0.81
USP47-209ENST00000530041 NLRP3Q96P20 1036 aa9.99□□□□□ -0.81
USP47-209ENST00000530041 ARHGEF10LQ9HCE6 1279 aa9.99□□□□□ -0.81
USP47-209ENST00000530041 SLC35F4A4IF30 521 aa9.98□□□□□ -0.81
USP47-209ENST00000530041 PIK3CDO00329 1044 aa9.97□□□□□ -0.81
USP47-209ENST00000530041 WIPF1O43516 503 aa9.97□□□□□ -0.81
USP47-209ENST00000530041 PROSER2Q86WR7 435 aaPredicted RBP9.97□□□□□ -0.81
USP47-209ENST00000530041 FNBP4Q8N3X1 1017 aaPredicted RBP9.97□□□□□ -0.81
USP47-209ENST00000530041 CCDC155Q8N6L0 562 aa9.97□□□□□ -0.81
USP47-209ENST00000530041 ERBB4Q15303 1308 aa9.97□□□□□ -0.81
USP47-209ENST00000530041 VSIG8P0DPA2 414 aa9.96□□□□□ -0.82
USP47-209ENST00000530041 PRICKLE2Q7Z3G6 844 aa9.96□□□□□ -0.82
USP47-209ENST00000530041 NFATC2IPQ8NCF5 419 aa9.96□□□□□ -0.82
USP47-209ENST00000530041 ADAMTS19Q8TE59 1207 aa9.96□□□□□ -0.82
USP47-209ENST00000530041 RAB6BQ9NRW1 208 aa9.96□□□□□ -0.82
USP47-209ENST00000530041 A6NJR5 290 aa9.95□□□□□ -0.82
USP47-209ENST00000530041 CNKSR1Q969H4 720 aa9.95□□□□□ -0.82
USP47-209ENST00000530041 ESYT1Q9BSJ8 1104 aa9.95□□□□□ -0.82
USP47-209ENST00000530041 GRIP2Q9C0E4 1043 aa9.95□□□□□ -0.82
USP47-209ENST00000530041 SENP3-EIF4A1A0A087X0R7 540 aa9.94□□□□□ -0.82
USP47-209ENST00000530041 IL2RAP01589 272 aa9.94□□□□□ -0.82
USP47-209ENST00000530041 SKIP12755 728 aa9.94□□□□□ -0.82
USP47-209ENST00000530041 SLC27A3Q5K4L6 730 aa9.94□□□□□ -0.82
USP47-209ENST00000530041 HDGFL1Q5TGJ6 251 aa9.94□□□□□ -0.82
USP47-209ENST00000530041 XAGE2Q96GT9 111 aa9.94□□□□□ -0.82
USP47-209ENST00000530041 LZTS3O60299 673 aaPredicted RBP9.93□□□□□ -0.82
USP47-209ENST00000530041 GMPRP36959 345 aa9.93□□□□□ -0.82
USP47-209ENST00000530041 ESCO1Q5FWF5 840 aa9.93□□□□□ -0.82
USP47-209ENST00000530041 HRH3Q9Y5N1 445 aa9.93□□□□□ -0.82
USP47-209ENST00000530041 ETNK1Q9HBU6 452 aa9.92□□□□□ -0.82
USP47-209ENST00000530041 RHOQP17081 205 aa9.91□□□□□ -0.82
USP47-209ENST00000530041 ITGA6P23229 1130 aa9.91□□□□□ -0.82
USP47-209ENST00000530041 CENPCQ03188 943 aa9.91□□□□□ -0.82
USP47-209ENST00000530041 EML3Q32P44 896 aa9.91□□□□□ -0.82
USP47-209ENST00000530041 NANOS1Q8WY41 292 aaKnown RBP9.91□□□□□ -0.82
USP47-209ENST00000530041 SPATA31C2B4DYI2 1134 aa9.9□□□□□ -0.82
USP47-209ENST00000530041 POU4F2Q12837 409 aa9.9□□□□□ -0.82
USP47-209ENST00000530041 STAU1O95793 577 aaKnown RBP9.89□□□□□ -0.83
USP47-209ENST00000530041 SCNN1DP51172 638 aa9.89□□□□□ -0.83
USP47-209ENST00000530041 WDR44Q5JSH3 913 aa9.89□□□□□ -0.83
USP47-209ENST00000530041 NBPF10Q6P3W6 841 aaKnown RBP9.89□□□□□ -0.83
USP47-209ENST00000530041 NBPF15Q8N660 670 aa9.89□□□□□ -0.83
USP47-209ENST00000530041 UCN2Q96RP3 112 aa9.89□□□□□ -0.83
USP47-209ENST00000530041 NOD1Q9Y239 953 aa9.89□□□□□ -0.83
USP47-209ENST00000530041 USP17L5A8MUK1 530 aa9.88□□□□□ -0.83
USP47-209ENST00000530041 INSM1Q01101 510 aaPredicted RBP9.88□□□□□ -0.83
USP47-209ENST00000530041 NCOA4Q13772 614 aa9.88□□□□□ -0.83
USP47-209ENST00000530041 GLMNQ92990 594 aa9.88□□□□□ -0.83
USP47-209ENST00000530041 ZSCAN10Q96SZ4 725 aaPredicted RBP9.88□□□□□ -0.83
USP47-209ENST00000530041 FHDC1Q9C0D6 1143 aaPredicted RBP9.88□□□□□ -0.83
USP47-209ENST00000530041 WASLO00401 505 aaPredicted RBP9.87□□□□□ -0.83
USP47-209ENST00000530041 INHAP05111 366 aa9.87□□□□□ -0.83
USP47-209ENST00000530041 GDF10P55107 478 aa9.87□□□□□ -0.83
USP47-209ENST00000530041 TAS1R3Q7RTX0 852 aa9.87□□□□□ -0.83
USP47-209ENST00000530041 DYRK1BQ9Y463 629 aa9.87□□□□□ -0.83
USP47-209ENST00000530041 PCDHGA11Q9Y5H2 935 aa9.87□□□□□ -0.83
USP47-209ENST00000530041 ATP9BO43861 1147 aa9.86□□□□□ -0.83
USP47-209ENST00000530041 GTF2E1P29083 439 aaPredicted RBP9.86□□□□□ -0.83
USP47-209ENST00000530041 TBC1D9Q6ZT07 1266 aa9.86□□□□□ -0.83
USP47-209ENST00000530041 PLEKHM2Q8IWE5 1019 aa9.86□□□□□ -0.83
USP47-209ENST00000530041 DEPDC4Q8N2C3 294 aa9.86□□□□□ -0.83
USP47-209ENST00000530041 TMEM214Q6NUQ4 689 aaKnown RBP9.85□□□□□ -0.83
USP47-209ENST00000530041 SV2AQ7L0J3 742 aa9.85□□□□□ -0.83
USP47-209ENST00000530041 VWA5B2Q8N398 1253 aa9.85□□□□□ -0.83
USP47-209ENST00000530041 GPR161Q8N6U8 529 aaKnown RBP9.85□□□□□ -0.83
USP47-209ENST00000530041 CDC14CA4D256 554 aa9.84□□□□□ -0.83
USP47-209ENST00000530041 USP17L3A6NCW0 530 aa9.84□□□□□ -0.83
USP47-209ENST00000530041 USP17L4A6NCW7 530 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms