RNA–Protein interactions for RNA: ENST00000529998.5

UBASH3B-205, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 4

Gene UBASH3B, Length 698 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-205ENST00000529998 OVOS2A0A0G2JMS6 1433 aa11.74□□□□□ -0.53
UBASH3B-205ENST00000529998 COL3A1P02461 1466 aaPredicted RBP11.73□□□□□ -0.53
UBASH3B-205ENST00000529998 TATP17735 454 aaPredicted RBP11.73□□□□□ -0.53
UBASH3B-205ENST00000529998 CCDC125Q86Z20 511 aa11.73□□□□□ -0.53
UBASH3B-205ENST00000529998 ZCRB1Q8TBF4 217 aaKnown RBP11.73□□□□□ -0.53
UBASH3B-205ENST00000529998 TNS1Q9HBL0 1735 aaKnown RBP11.73□□□□□ -0.53
UBASH3B-205ENST00000529998 PKD1L3Q7Z443 1732 aa11.72□□□□□ -0.53
UBASH3B-205ENST00000529998 DIAPH1O60610 1272 aaKnown RBP11.72□□□□□ -0.53
UBASH3B-205ENST00000529998 TRIM37O94972 964 aa11.72□□□□□ -0.53
UBASH3B-205ENST00000529998 AEBP1Q8IUX7 1158 aa11.72□□□□□ -0.53
UBASH3B-205ENST00000529998 DDX54Q8TDD1 881 aaKnown RBP11.72□□□□□ -0.53
UBASH3B-205ENST00000529998 KAT6BQ8WYB5 2073 aa11.72□□□□□ -0.53
UBASH3B-205ENST00000529998 PTF1AQ7RTS3 328 aa11.71□□□□□ -0.53
UBASH3B-205ENST00000529998 BCL9O00512 1426 aa11.7□□□□□ -0.54
UBASH3B-205ENST00000529998 SULT6B1Q6IMI4 303 aa11.7□□□□□ -0.54
UBASH3B-205ENST00000529998 DEFB132Q7Z7B7 95 aa11.7□□□□□ -0.54
UBASH3B-205ENST00000529998 RALBP1Q15311 655 aa11.69□□□□□ -0.54
UBASH3B-205ENST00000529998 CFAP53Q96M91 514 aa11.69□□□□□ -0.54
UBASH3B-205ENST00000529998 KDRP35968 1356 aa11.68□□□□□ -0.54
UBASH3B-205ENST00000529998 U2SURPO15042 1029 aaKnown RBP11.68□□□□□ -0.54
UBASH3B-205ENST00000529998 CYP27B1O15528 508 aa11.68□□□□□ -0.54
UBASH3B-205ENST00000529998 KCNQ2O43526 872 aa11.68□□□□□ -0.54
UBASH3B-205ENST00000529998 HMOX1P09601 288 aa11.68□□□□□ -0.54
UBASH3B-205ENST00000529998 SF3B2Q13435 895 aaKnown RBP11.68□□□□□ -0.54
UBASH3B-205ENST00000529998 ACSBG1Q96GR2 724 aa11.68□□□□□ -0.54
UBASH3B-205ENST00000529998 DOT1LQ8TEK3 1739 aa11.68□□□□□ -0.54
UBASH3B-205ENST00000529998 NHSQ6T4R5 1651 aa11.68□□□□□ -0.54
UBASH3B-205ENST00000529998 PCDH11XQ9BZA7 1347 aa11.67□□□□□ -0.54
UBASH3B-205ENST00000529998 PCDH11YQ9BZA8 1340 aa11.67□□□□□ -0.54
UBASH3B-205ENST00000529998 APBA3O96018 575 aa11.67□□□□□ -0.54
UBASH3B-205ENST00000529998 EN1Q05925 392 aaPredicted RBP11.67□□□□□ -0.54
UBASH3B-205ENST00000529998 BCL11BQ9C0K0 894 aaPredicted RBP11.67□□□□□ -0.54
UBASH3B-205ENST00000529998 PRKRIP1Q9H875 184 aaPredicted RBP11.67□□□□□ -0.54
UBASH3B-205ENST00000529998 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.67□□□□□ -0.54
UBASH3B-205ENST00000529998 SPG7Q9UQ90 795 aa11.67□□□□□ -0.54
UBASH3B-205ENST00000529998 BTAF1O14981 1849 aa11.66□□□□□ -0.54
UBASH3B-205ENST00000529998 BAG6P46379 1132 aa11.66□□□□□ -0.54
UBASH3B-205ENST00000529998 TOGARAM1Q9Y4F4 1720 aa11.66□□□□□ -0.54
UBASH3B-205ENST00000529998 ITGB4P16144 1822 aa11.65□□□□□ -0.54
UBASH3B-205ENST00000529998 MYBBP1AQ9BQG0 1328 aaKnown RBP11.65□□□□□ -0.54
UBASH3B-205ENST00000529998 PLEKHO1Q53GL0 409 aaPredicted RBP11.65□□□□□ -0.54
UBASH3B-205ENST00000529998 PHKG2P15735 406 aa11.64□□□□□ -0.55
UBASH3B-205ENST00000529998 PRIM1P49642 420 aaKnown RBP11.64□□□□□ -0.55
UBASH3B-205ENST00000529998 NKX1-1Q15270 411 aaPredicted RBP11.64□□□□□ -0.55
UBASH3B-205ENST00000529998 EZH2Q15910 746 aaKnown RBP11.64□□□□□ -0.55
UBASH3B-205ENST00000529998 AMOTQ4VCS5 1084 aa11.64□□□□□ -0.55
UBASH3B-205ENST00000529998 IFNL2Q8IZJ0 200 aa11.64□□□□□ -0.55
UBASH3B-205ENST00000529998 CAMKK2Q96RR4 588 aa11.64□□□□□ -0.55
UBASH3B-205ENST00000529998 NUDCQ9Y266 331 aa11.64□□□□□ -0.55
UBASH3B-205ENST00000529998 VIRMAQ69YN4 1812 aaKnown RBP11.64□□□□□ -0.55
UBASH3B-205ENST00000529998 PLEKHG2Q9H7P9 1386 aa11.64□□□□□ -0.55
UBASH3B-205ENST00000529998 U2AF1L5P0DN76 240 aaPredicted RBP11.63□□□□□ -0.55
UBASH3B-205ENST00000529998 U2AF1Q01081 240 aaKnown RBP eCLIP11.63□□□□□ -0.55
UBASH3B-205ENST00000529998 ZNF530Q6P9A1 599 aaPredicted RBP11.63□□□□□ -0.55
UBASH3B-205ENST00000529998 SYTL4Q96C24 671 aaPredicted RBP11.63□□□□□ -0.55
UBASH3B-205ENST00000529998 RREB1Q92766 1687 aa11.62□□□□□ -0.55
UBASH3B-205ENST00000529998 RGPD3A6NKT7 1758 aaPredicted RBP11.62□□□□□ -0.55
UBASH3B-205ENST00000529998 RGPD4Q7Z3J3 1758 aa11.62□□□□□ -0.55
UBASH3B-205ENST00000529998 PLSCR1O15162 318 aa11.62□□□□□ -0.55
UBASH3B-205ENST00000529998 MTHFSDQ2M296 383 aaKnown RBP11.62□□□□□ -0.55
UBASH3B-205ENST00000529998 RSPH6AQ9H0K4 717 aa11.62□□□□□ -0.55
UBASH3B-205ENST00000529998 PROM2Q8N271 834 aa11.61□□□□□ -0.55
UBASH3B-205ENST00000529998 PHACTR3Q96KR7 559 aa11.61□□□□□ -0.55
UBASH3B-205ENST00000529998 SCN11AQ9UI33 1791 aa11.61□□□□□ -0.55
UBASH3B-205ENST00000529998 NUP188Q5SRE5 1749 aa11.6□□□□□ -0.55
UBASH3B-205ENST00000529998 FCHSD2O94868 740 aa11.6□□□□□ -0.55
UBASH3B-205ENST00000529998 PRKAR2BP31323 418 aa11.6□□□□□ -0.55
UBASH3B-205ENST00000529998 MPRIPQ6WCQ1 1025 aa11.6□□□□□ -0.55
UBASH3B-205ENST00000529998 C1orf141Q5JVX7 400 aa11.59□□□□□ -0.55
UBASH3B-205ENST00000529998 DCAF5Q96JK2 942 aa11.59□□□□□ -0.55
UBASH3B-205ENST00000529998 LY75O60449 1722 aa11.59□□□□□ -0.55
UBASH3B-205ENST00000529998 KDM6AO15550 1401 aaPredicted RBP11.59□□□□□ -0.55
UBASH3B-205ENST00000529998 HSP90AB1P08238 724 aaKnown RBP11.58□□□□□ -0.56
UBASH3B-205ENST00000529998 CCDC184Q52MB2 194 aa11.58□□□□□ -0.56
UBASH3B-205ENST00000529998 AKAP4Q5JQC9 854 aa11.58□□□□□ -0.56
UBASH3B-205ENST00000529998 PIGBQ92521 554 aa11.58□□□□□ -0.56
UBASH3B-205ENST00000529998 LGR6Q9HBX8 967 aa11.58□□□□□ -0.56
UBASH3B-205ENST00000529998 DLG5Q8TDM6 1919 aa11.57□□□□□ -0.56
UBASH3B-205ENST00000529998 ADAMTS7Q9UKP4 1686 aa11.57□□□□□ -0.56
UBASH3B-205ENST00000529998 ANP32CO43423 234 aa11.57□□□□□ -0.56
UBASH3B-205ENST00000529998 TXNRD1Q16881 649 aa11.57□□□□□ -0.56
UBASH3B-205ENST00000529998 PLEKHF1Q96S99 279 aa11.57□□□□□ -0.56
UBASH3B-205ENST00000529998 ERVV-2B6SEH9 535 aa11.56□□□□□ -0.56
UBASH3B-205ENST00000529998 GAS2L2Q8NHY3 880 aa11.56□□□□□ -0.56
UBASH3B-205ENST00000529998 TMOD3Q9NYL9 352 aa11.56□□□□□ -0.56
UBASH3B-205ENST00000529998 RNMTO43148 476 aaKnown RBP11.55□□□□□ -0.56
UBASH3B-205ENST00000529998 KCNQ4P56696 695 aa11.55□□□□□ -0.56
UBASH3B-205ENST00000529998 NFATC2IPQ8NCF5 419 aa11.55□□□□□ -0.56
UBASH3B-205ENST00000529998 LRRC4BQ9NT99 713 aa11.55□□□□□ -0.56
UBASH3B-205ENST00000529998 ASAP1Q9ULH1 1129 aa11.55□□□□□ -0.56
UBASH3B-205ENST00000529998 GNAT3A8MTJ3 354 aa11.54□□□□□ -0.56
UBASH3B-205ENST00000529998 CABP4P57796 275 aa11.54□□□□□ -0.56
UBASH3B-205ENST00000529998 IL17REQ8NFR9 667 aa11.54□□□□□ -0.56
UBASH3B-205ENST00000529998 ATG3Q9NT62 314 aa11.54□□□□□ -0.56
UBASH3B-205ENST00000529998 ADAMTS8Q9UP79 889 aa11.54□□□□□ -0.56
UBASH3B-205ENST00000529998 MAP3K5Q99683 1374 aa11.54□□□□□ -0.56
UBASH3B-205ENST00000529998 TAF1LQ8IZX4 1826 aa11.53□□□□□ -0.56
UBASH3B-205ENST00000529998 PSDA5PKW4 1024 aaPredicted RBP11.53□□□□□ -0.56
UBASH3B-205ENST00000529998 WDR43Q15061 677 aaKnown RBP eCLIP11.53□□□□□ -0.56
UBASH3B-205ENST00000529998 SIPA1L3O60292 1781 aaPredicted RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms