RNA–Protein interactions for RNA: ENST00000529928.1

COL16A1-216, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-216ENST00000529928 DOT1LQ8TEK3 1739 aa22.7■■□□□ 1.22
COL16A1-216ENST00000529928 LY75O60449 1722 aa22.69■■□□□ 1.22
COL16A1-216ENST00000529928 AMPHP49418 695 aa22.69■■□□□ 1.22
COL16A1-216ENST00000529928 ZCRB1Q8TBF4 217 aaKnown RBP22.69■■□□□ 1.22
COL16A1-216ENST00000529928 NSD2O96028 1365 aa22.68■■□□□ 1.22
COL16A1-216ENST00000529928 KCNQ4P56696 695 aa22.68■■□□□ 1.22
COL16A1-216ENST00000529928 TUBGCP6Q96RT7 1819 aa22.68■■□□□ 1.22
COL16A1-216ENST00000529928 PELP1Q8IZL8 1130 aaKnown RBP22.67■■□□□ 1.22
COL16A1-216ENST00000529928 TONSLQ96HA7 1378 aa22.66■■□□□ 1.22
COL16A1-216ENST00000529928 MEGF6O75095 1541 aa22.66■■□□□ 1.22
COL16A1-216ENST00000529928 SHANK3Q9BYB0 1731 aa22.65■■□□□ 1.22
COL16A1-216ENST00000529928 SLC24A1O60721 1099 aa22.65■■□□□ 1.22
COL16A1-216ENST00000529928 CCNL1Q9UK58 526 aaPredicted RBP22.65■■□□□ 1.22
COL16A1-216ENST00000529928 RTL1A6NKG5 1358 aa22.64■■□□□ 1.22
COL16A1-216ENST00000529928 NLGN2Q8NFZ4 835 aa22.64■■□□□ 1.21
COL16A1-216ENST00000529928 TESK2Q96S53 571 aa22.64■■□□□ 1.21
COL16A1-216ENST00000529928 USP47Q96K76 1375 aa22.63■■□□□ 1.21
COL16A1-216ENST00000529928 CGNL1Q0VF96 1302 aa22.63■■□□□ 1.21
COL16A1-216ENST00000529928 GIGYF1O75420 1035 aaPredicted RBP22.63■■□□□ 1.21
COL16A1-216ENST00000529928 RGPD2P0DJD1 1756 aa22.63■■□□□ 1.21
COL16A1-216ENST00000529928 FBLN1P23142 703 aa22.62■■□□□ 1.21
COL16A1-216ENST00000529928 MSH5O43196 834 aa22.61■■□□□ 1.21
COL16A1-216ENST00000529928 SMG6Q86US8 1419 aaKnown RBP22.6■■□□□ 1.21
COL16A1-216ENST00000529928 ST20-MTHFSA0A0A6YYL1 179 aa22.6■■□□□ 1.21
COL16A1-216ENST00000529928 GRIN3BO60391 1043 aa22.6■■□□□ 1.21
COL16A1-216ENST00000529928 HMGB2P26583 209 aaKnown RBP22.59■■□□□ 1.21
COL16A1-216ENST00000529928 NBPF6Q5VWK0 638 aa22.59■■□□□ 1.21
COL16A1-216ENST00000529928 RAPGEF4Q8WZA2 1011 aa22.59■■□□□ 1.21
COL16A1-216ENST00000529928 NBPF4Q96M43 638 aa22.59■■□□□ 1.21
COL16A1-216ENST00000529928 COL23A1Q86Y22 540 aaPredicted RBP22.58■■□□□ 1.21
COL16A1-216ENST00000529928 RRS1Q15050 365 aaKnown RBP22.57■■□□□ 1.2
COL16A1-216ENST00000529928 GOLGB1Q14789 3259 aaKnown RBP22.56■■□□□ 1.2
COL16A1-216ENST00000529928 YBX3P16989 372 aaKnown RBP eCLIP22.56■■□□□ 1.2
COL16A1-216ENST00000529928 TATP17735 454 aaPredicted RBP22.55■■□□□ 1.2
COL16A1-216ENST00000529928 USHBP1Q8N6Y0 703 aa22.55■■□□□ 1.2
COL16A1-216ENST00000529928 C5P01031 1676 aa22.55■■□□□ 1.2
COL16A1-216ENST00000529928 PCDH11XQ9BZA7 1347 aa22.55■■□□□ 1.2
COL16A1-216ENST00000529928 PCDH11YQ9BZA8 1340 aa22.55■■□□□ 1.2
COL16A1-216ENST00000529928 FYB1O15117 783 aa22.54■■□□□ 1.2
COL16A1-216ENST00000529928 FLAD1Q8NFF5 587 aa22.54■■□□□ 1.2
COL16A1-216ENST00000529928 GGNBP2Q9H3C7 697 aa22.54■■□□□ 1.2
COL16A1-216ENST00000529928 MSL1Q68DK7 614 aa22.53■■□□□ 1.2
COL16A1-216ENST00000529928 INSRP06213 1382 aa22.52■■□□□ 1.2
COL16A1-216ENST00000529928 CD2APQ9Y5K6 639 aa22.52■■□□□ 1.2
COL16A1-216ENST00000529928 PALLDQ8WX93 1383 aa22.51■■□□□ 1.19
COL16A1-216ENST00000529928 FLT4P35916 1363 aa22.5■■□□□ 1.19
COL16A1-216ENST00000529928 KIF24Q5T7B8 1368 aa22.5■■□□□ 1.19
COL16A1-216ENST00000529928 TMF1P82094 1093 aa22.5■■□□□ 1.19
COL16A1-216ENST00000529928 HSP90AB2PQ58FF8 381 aa22.49■■□□□ 1.19
COL16A1-216ENST00000529928 TAF1LQ8IZX4 1826 aa22.48■■□□□ 1.19
COL16A1-216ENST00000529928 MPRIPQ6WCQ1 1025 aa22.48■■□□□ 1.19
COL16A1-216ENST00000529928 SMARCC1Q92922 1105 aaPredicted RBP22.47■■□□□ 1.19
COL16A1-216ENST00000529928 ATP10DQ9P241 1426 aa22.46■■□□□ 1.19
COL16A1-216ENST00000529928 KIF20BQ96Q89 1820 aa22.45■■□□□ 1.19
COL16A1-216ENST00000529928 CYP27B1O15528 508 aa22.45■■□□□ 1.18
COL16A1-216ENST00000529928 AK7Q96M32 723 aa22.45■■□□□ 1.18
COL16A1-216ENST00000529928 C4BP0C0L5 1744 aa22.45■■□□□ 1.18
COL16A1-216ENST00000529928 NSD3Q9BZ95 1437 aa22.44■■□□□ 1.18
COL16A1-216ENST00000529928 TOGARAM1Q9Y4F4 1720 aa22.43■■□□□ 1.18
COL16A1-216ENST00000529928 CDCA8Q53HL2 280 aa22.43■■□□□ 1.18
COL16A1-216ENST00000529928 PKD1L3Q7Z443 1732 aa22.43■■□□□ 1.18
COL16A1-216ENST00000529928 GPBP1L1Q9HC44 474 aaPredicted RBP22.42■■□□□ 1.18
COL16A1-216ENST00000529928 ITGB4P16144 1822 aa22.41■■□□□ 1.18
COL16A1-216ENST00000529928 ADCY9O60503 1353 aa22.39■■□□□ 1.18
COL16A1-216ENST00000529928 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.39■■□□□ 1.17
COL16A1-216ENST00000529928 PHF14O94880 888 aa22.39■■□□□ 1.17
COL16A1-216ENST00000529928 NKX1-1Q15270 411 aaPredicted RBP22.39■■□□□ 1.17
COL16A1-216ENST00000529928 PIGBQ92521 554 aa22.39■■□□□ 1.17
COL16A1-216ENST00000529928 SPG7Q9UQ90 795 aa22.39■■□□□ 1.17
COL16A1-216ENST00000529928 EMILIN1Q9Y6C2 1016 aa22.39■■□□□ 1.17
COL16A1-216ENST00000529928 NCAPD2Q15021 1401 aa22.39■■□□□ 1.17
COL16A1-216ENST00000529928 UBR3Q6ZT12 1888 aa22.39■■□□□ 1.17
COL16A1-216ENST00000529928 SSFA2P28290 1259 aa22.38■■□□□ 1.17
COL16A1-216ENST00000529928 AMIGO3Q86WK7 504 aa22.38■■□□□ 1.17
COL16A1-216ENST00000529928 IGSF1Q8N6C5 1336 aa22.37■■□□□ 1.17
COL16A1-216ENST00000529928 IFFO2Q5TF58 517 aa22.37■■□□□ 1.17
COL16A1-216ENST00000529928 LOC102724428A0A0B4J2F2 783 aa22.35■■□□□ 1.17
COL16A1-216ENST00000529928 SIK1P57059 783 aa22.35■■□□□ 1.17
COL16A1-216ENST00000529928 CARD14Q9BXL6 1004 aa22.35■■□□□ 1.17
COL16A1-216ENST00000529928 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.35■■□□□ 1.172e-9■■■■□ 23.1
COL16A1-216ENST00000529928 MAP2P11137 1827 aaKnown RBP22.34■■□□□ 1.17
COL16A1-216ENST00000529928 PPM1GO15355 546 aaPredicted RBP22.34■■□□□ 1.17
COL16A1-216ENST00000529928 TMOD3Q9NYL9 352 aa22.34■■□□□ 1.17
COL16A1-216ENST00000529928 ANKRD26Q9UPS8 1709 aa22.34■■□□□ 1.17
COL16A1-216ENST00000529928 SMIM5Q71RC9 77 aa22.33■■□□□ 1.17
COL16A1-216ENST00000529928 LINC00116Q8NCU8 138 aa22.33■■□□□ 1.17
COL16A1-216ENST00000529928 ZNF526Q8TF50 670 aaPredicted RBP22.33■■□□□ 1.17
COL16A1-216ENST00000529928 CEP350Q5VT06 3117 aa22.33■■□□□ 1.17
COL16A1-216ENST00000529928 WASHC2AQ641Q2 1341 aa22.32■■□□□ 1.16
COL16A1-216ENST00000529928 HSPA6P17066 643 aa22.31■■□□□ 1.16
COL16A1-216ENST00000529928 GNPATO15228 680 aa22.3■■□□□ 1.16
COL16A1-216ENST00000529928 IFNL2Q8IZJ0 200 aa22.3■■□□□ 1.16
COL16A1-216ENST00000529928 EYA1Q99502 592 aa22.3■■□□□ 1.16
COL16A1-216ENST00000529928 WWC3Q9ULE0 1092 aa22.3■■□□□ 1.16
COL16A1-216ENST00000529928 ASAP1Q9ULH1 1129 aa22.3■■□□□ 1.16
COL16A1-216ENST00000529928 ATP6V1AP38606 617 aa22.29■■□□□ 1.16
COL16A1-216ENST00000529928 ITPK1Q13572 414 aa22.29■■□□□ 1.16
COL16A1-216ENST00000529928 PHKG2P15735 406 aa22.28■■□□□ 1.16
COL16A1-216ENST00000529928 PLEKHG2Q9H7P9 1386 aa22.26■■□□□ 1.15
COL16A1-216ENST00000529928 CICQ96RK0 1608 aaPredicted RBP22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms