RNA–Protein interactions for RNA: ENST00000529725.1

SIPA1-205, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 2

Gene SIPA1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-205ENST00000529725 AMER1Q5JTC6 1135 aaPredicted RBP21.92■■□□□ 1.1
SIPA1-205ENST00000529725 SRCAPQ6ZRS2 3230 aa21.91■■□□□ 1.1
SIPA1-205ENST00000529725 PER1O15534 1290 aaPredicted RBP21.9■■□□□ 1.1
SIPA1-205ENST00000529725 NBPF14Q5TI25 921 aa21.9■■□□□ 1.1
SIPA1-205ENST00000529725 RREB1Q92766 1687 aa21.89■■□□□ 1.1
SIPA1-205ENST00000529725 EIF4A2Q14240 407 aaKnown RBP21.89■■□□□ 1.09
SIPA1-205ENST00000529725 EYA1Q99502 592 aa21.89■■□□□ 1.09
SIPA1-205ENST00000529725 PROM2Q8N271 834 aa21.88■■□□□ 1.09
SIPA1-205ENST00000529725 NHSQ6T4R5 1651 aa21.87■■□□□ 1.09
SIPA1-205ENST00000529725 NUP188Q5SRE5 1749 aa21.86■■□□□ 1.09
SIPA1-205ENST00000529725 RGPD3A6NKT7 1758 aaPredicted RBP21.85■■□□□ 1.09
SIPA1-205ENST00000529725 RGPD4Q7Z3J3 1758 aa21.85■■□□□ 1.09
SIPA1-205ENST00000529725 PRIM1P49642 420 aaKnown RBP21.85■■□□□ 1.09
SIPA1-205ENST00000529725 TXNRD1Q16881 649 aa21.85■■□□□ 1.09
SIPA1-205ENST00000529725 SYTL4Q96C24 671 aaPredicted RBP21.85■■□□□ 1.09
SIPA1-205ENST00000529725 NCAPD2Q15021 1401 aa21.85■■□□□ 1.09
SIPA1-205ENST00000529725 CC2D1BQ5T0F9 858 aaKnown RBP21.84■■□□□ 1.09
SIPA1-205ENST00000529725 SHANK3Q9BYB0 1731 aa21.83■■□□□ 1.09
SIPA1-205ENST00000529725 PCDH11XQ9BZA7 1347 aa21.83■■□□□ 1.09
SIPA1-205ENST00000529725 PCDH11YQ9BZA8 1340 aa21.83■■□□□ 1.09
SIPA1-205ENST00000529725 CYP27B1O15528 508 aa21.81■■□□□ 1.08
SIPA1-205ENST00000529725 CNGB1Q14028 1251 aaPredicted RBP21.81■■□□□ 1.08
SIPA1-205ENST00000529725 SPG7Q9UQ90 795 aa21.81■■□□□ 1.08
SIPA1-205ENST00000529725 ANO8Q9HCE9 1232 aaPredicted RBP21.8■■□□□ 1.08
SIPA1-205ENST00000529725 IGSF1Q8N6C5 1336 aa21.8■■□□□ 1.08
SIPA1-205ENST00000529725 KAT6BQ8WYB5 2073 aa21.79■■□□□ 1.08
SIPA1-205ENST00000529725 BTAF1O14981 1849 aa21.79■■□□□ 1.08
SIPA1-205ENST00000529725 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.79■■□□□ 1.08
SIPA1-205ENST00000529725 MTHFSP49914 203 aa21.78■■□□□ 1.08
SIPA1-205ENST00000529725 NPC1L1Q9UHC9 1359 aa21.77■■□□□ 1.08
SIPA1-205ENST00000529725 DOT1LQ8TEK3 1739 aa21.76■■□□□ 1.07
SIPA1-205ENST00000529725 STK32BQ9NY57 414 aa21.76■■□□□ 1.07
SIPA1-205ENST00000529725 IL13P35225 146 aa21.75■■□□□ 1.07
SIPA1-205ENST00000529725 PKD1L3Q7Z443 1732 aa21.75■■□□□ 1.07
SIPA1-205ENST00000529725 NKX1-1Q15270 411 aaPredicted RBP21.74■■□□□ 1.07
SIPA1-205ENST00000529725 LRRC4BQ9NT99 713 aa21.74■■□□□ 1.07
SIPA1-205ENST00000529725 SLC15A2Q16348 729 aa21.73■■□□□ 1.07
SIPA1-205ENST00000529725 SLC27A3Q5K4L6 730 aa21.73■■□□□ 1.07
SIPA1-205ENST00000529725 IFNL2Q8IZJ0 200 aa21.73■■□□□ 1.07
SIPA1-205ENST00000529725 PHKG2P15735 406 aa21.72■■□□□ 1.07
SIPA1-205ENST00000529725 SULT6B1Q6IMI4 303 aa21.72■■□□□ 1.07
SIPA1-205ENST00000529725 MPRIPQ6WCQ1 1025 aa21.72■■□□□ 1.07
SIPA1-205ENST00000529725 AEBP1Q8IUX7 1158 aa21.72■■□□□ 1.07
SIPA1-205ENST00000529725 LRP5O75197 1615 aa21.72■■□□□ 1.07
SIPA1-205ENST00000529725 PLEKHO1Q53GL0 409 aaPredicted RBP21.71■■□□□ 1.07
SIPA1-205ENST00000529725 PLEKHG2Q9H7P9 1386 aa21.71■■□□□ 1.07
SIPA1-205ENST00000529725 KCNQ4P56696 695 aa21.69■■□□□ 1.06
SIPA1-205ENST00000529725 PDGFDQ9GZP0 370 aaPredicted RBP21.69■■□□□ 1.06
SIPA1-205ENST00000529725 DIAPH1O60610 1272 aaKnown RBP21.68■■□□□ 1.06
SIPA1-205ENST00000529725 AMOTQ4VCS5 1084 aa21.68■■□□□ 1.06
SIPA1-205ENST00000529725 PIGBQ92521 554 aa21.67■■□□□ 1.06
SIPA1-205ENST00000529725 SPON1Q9HCB6 807 aa21.67■■□□□ 1.06
SIPA1-205ENST00000529725 CCNL1Q9UK58 526 aaPredicted RBP21.67■■□□□ 1.06
SIPA1-205ENST00000529725 KDRP35968 1356 aa21.66■■□□□ 1.06
SIPA1-205ENST00000529725 ZNF827Q17R98 1081 aa21.66■■□□□ 1.06
SIPA1-205ENST00000529725 ZNF530Q6P9A1 599 aaPredicted RBP21.66■■□□□ 1.06
SIPA1-205ENST00000529725 AKT1S1Q96B36 256 aa21.65■■□□□ 1.06
SIPA1-205ENST00000529725 TMOD3Q9NYL9 352 aa21.65■■□□□ 1.06
SIPA1-205ENST00000529725 TOGARAM1Q9Y4F4 1720 aa21.65■■□□□ 1.06
SIPA1-205ENST00000529725 PAPPAQ13219 1627 aa21.65■■□□□ 1.06
SIPA1-205ENST00000529725 HSP90AB1P08238 724 aaKnown RBP21.64■■□□□ 1.05
SIPA1-205ENST00000529725 HMOX1P09601 288 aa21.64■■□□□ 1.05
SIPA1-205ENST00000529725 SMARCC1Q92922 1105 aaPredicted RBP21.64■■□□□ 1.05
SIPA1-205ENST00000529725 PALLDQ8WX93 1383 aa21.63■■□□□ 1.05
SIPA1-205ENST00000529725 ZBTB7AO95365 584 aa21.63■■□□□ 1.05
SIPA1-205ENST00000529725 DCAF5Q96JK2 942 aa21.63■■□□□ 1.05
SIPA1-205ENST00000529725 LY75O60449 1722 aa21.63■■□□□ 1.05
SIPA1-205ENST00000529725 C1orf141Q5JVX7 400 aa21.62■■□□□ 1.05
SIPA1-205ENST00000529725 ITGB4P16144 1822 aa21.62■■□□□ 1.05
SIPA1-205ENST00000529725 CASZ1Q86V15 1759 aa21.61■■□□□ 1.05
SIPA1-205ENST00000529725 ERVV-2B6SEH9 535 aa21.6■■□□□ 1.05
SIPA1-205ENST00000529725 TFCP2L1Q9NZI6 479 aa21.6■■□□□ 1.05
SIPA1-205ENST00000529725 ATF5Q9Y2D1 282 aaPredicted RBP21.6■■□□□ 1.05
SIPA1-205ENST00000529725 COL3A1P02461 1466 aaPredicted RBP21.59■■□□□ 1.05
SIPA1-205ENST00000529725 U2SURPO15042 1029 aaKnown RBP21.59■■□□□ 1.05
SIPA1-205ENST00000529725 PPP2R1AP30153 589 aa21.59■■□□□ 1.05
SIPA1-205ENST00000529725 CFAP53Q96M91 514 aa21.59■■□□□ 1.05
SIPA1-205ENST00000529725 PPP1R1BQ9UD71 204 aaPredicted RBP21.59■■□□□ 1.05
SIPA1-205ENST00000529725 ASAP1Q9ULH1 1129 aa21.59■■□□□ 1.05
SIPA1-205ENST00000529725 HMGB2P26583 209 aaKnown RBP21.58■■□□□ 1.05
SIPA1-205ENST00000529725 MTFR1LQ9H019 292 aa21.58■■□□□ 1.05
SIPA1-205ENST00000529725 ATG3Q9NT62 314 aa21.57■■□□□ 1.04
SIPA1-205ENST00000529725 KDM6AO15550 1401 aaPredicted RBP21.56■■□□□ 1.04
SIPA1-205ENST00000529725 CABP4P57796 275 aa21.56■■□□□ 1.04
SIPA1-205ENST00000529725 AKAP4Q5JQC9 854 aa21.56■■□□□ 1.04
SIPA1-205ENST00000529725 PNPLA7Q6ZV29 1317 aa21.55■■□□□ 1.04
SIPA1-205ENST00000529725 LOC102724428A0A0B4J2F2 783 aa21.55■■□□□ 1.04
SIPA1-205ENST00000529725 PTGER2P43116 358 aa21.55■■□□□ 1.04
SIPA1-205ENST00000529725 SIK1P57059 783 aa21.55■■□□□ 1.04
SIPA1-205ENST00000529725 MTHFSDQ2M296 383 aaKnown RBP21.54■■□□□ 1.04
SIPA1-205ENST00000529725 SLC16A10Q8TF71 515 aa21.53■■□□□ 1.04
SIPA1-205ENST00000529725 DDX10Q13206 875 aaKnown RBP21.52■■□□□ 1.04
SIPA1-205ENST00000529725 NFATC2IPQ8NCF5 419 aa21.52■■□□□ 1.04
SIPA1-205ENST00000529725 NUDCQ9Y266 331 aa21.52■■□□□ 1.04
SIPA1-205ENST00000529725 MSH5O43196 834 aa21.51■■□□□ 1.03
SIPA1-205ENST00000529725 ATP6V1AP38606 617 aa21.51■■□□□ 1.03
SIPA1-205ENST00000529725 LGR6Q9HBX8 967 aa21.51■■□□□ 1.03
SIPA1-205ENST00000529725 C5P01031 1676 aa21.5■■□□□ 1.03
SIPA1-205ENST00000529725 ZEB1P37275 1124 aaPredicted RBP21.5■■□□□ 1.03
SIPA1-205ENST00000529725 COL23A1Q86Y22 540 aaPredicted RBP21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms