RNA–Protein interactions for RNA: ENST00000529477.5

PTP4A2-212, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-212ENST00000529477 UTRNP46939 3433 aa26.03■■□□□ 1.76
PTP4A2-212ENST00000529477 BCL11BQ9C0K0 894 aaPredicted RBP26.03■■□□□ 1.76
PTP4A2-212ENST00000529477 POLKQ9UBT6 870 aa26.03■■□□□ 1.76
PTP4A2-212ENST00000529477 WASHC2AQ641Q2 1341 aa26.03■■□□□ 1.76
PTP4A2-212ENST00000529477 NBPF6Q5VWK0 638 aa26.02■■□□□ 1.76
PTP4A2-212ENST00000529477 NBPF4Q96M43 638 aa26.02■■□□□ 1.76
PTP4A2-212ENST00000529477 RAPGEF4Q8WZA2 1011 aa26.01■■□□□ 1.75
PTP4A2-212ENST00000529477 PTF1AQ7RTS3 328 aa26■■□□□ 1.75
PTP4A2-212ENST00000529477 PROM2Q8N271 834 aa25.99■■□□□ 1.75
PTP4A2-212ENST00000529477 KAT6BQ8WYB5 2073 aa25.99■■□□□ 1.75
PTP4A2-212ENST00000529477 AMER1Q5JTC6 1135 aaPredicted RBP25.98■■□□□ 1.75
PTP4A2-212ENST00000529477 USHBP1Q8N6Y0 703 aa25.98■■□□□ 1.75
PTP4A2-212ENST00000529477 PDGFDQ9GZP0 370 aaPredicted RBP25.98■■□□□ 1.75
PTP4A2-212ENST00000529477 TATP17735 454 aaPredicted RBP25.97■■□□□ 1.75
PTP4A2-212ENST00000529477 PTGER2P43116 358 aa25.96■■□□□ 1.75
PTP4A2-212ENST00000529477 ZCRB1Q8TBF4 217 aaKnown RBP25.96■■□□□ 1.75
PTP4A2-212ENST00000529477 DDX54Q8TDD1 881 aaKnown RBP25.96■■□□□ 1.75
PTP4A2-212ENST00000529477 CHD4Q14839 1912 aa25.96■■□□□ 1.75
PTP4A2-212ENST00000529477 PER1O15534 1290 aaPredicted RBP25.95■■□□□ 1.74
PTP4A2-212ENST00000529477 MEGF6O75095 1541 aa25.93■■□□□ 1.74
PTP4A2-212ENST00000529477 NHSQ6T4R5 1651 aa25.93■■□□□ 1.74
PTP4A2-212ENST00000529477 CC2D1BQ5T0F9 858 aaKnown RBP25.92■■□□□ 1.74
PTP4A2-212ENST00000529477 ZBTB7AO95365 584 aa25.91■■□□□ 1.74
PTP4A2-212ENST00000529477 PAPPAQ13219 1627 aa25.91■■□□□ 1.74
PTP4A2-212ENST00000529477 EIF4A2Q14240 407 aaKnown RBP25.9■■□□□ 1.74
PTP4A2-212ENST00000529477 TXNRD1Q16881 649 aa25.89■■□□□ 1.74
PTP4A2-212ENST00000529477 ACSBG1Q96GR2 724 aa25.89■■□□□ 1.74
PTP4A2-212ENST00000529477 EYA1Q99502 592 aa25.89■■□□□ 1.74
PTP4A2-212ENST00000529477 NPC1L1Q9UHC9 1359 aa25.89■■□□□ 1.74
PTP4A2-212ENST00000529477 ZNF784Q8NCA9 323 aaPredicted RBP25.88■■□□□ 1.73
PTP4A2-212ENST00000529477 SLC15A2Q16348 729 aa25.87■■□□□ 1.73
PTP4A2-212ENST00000529477 PCDH11XQ9BZA7 1347 aa25.87■■□□□ 1.73
PTP4A2-212ENST00000529477 PCDH11YQ9BZA8 1340 aa25.87■■□□□ 1.73
PTP4A2-212ENST00000529477 CNGB1Q14028 1251 aaPredicted RBP25.86■■□□□ 1.73
PTP4A2-212ENST00000529477 SGIP1Q9BQI5 828 aa25.86■■□□□ 1.73
PTP4A2-212ENST00000529477 STK32BQ9NY57 414 aa25.86■■□□□ 1.73
PTP4A2-212ENST00000529477 NCAPD2Q15021 1401 aa25.86■■□□□ 1.73
PTP4A2-212ENST00000529477 SHANK3Q9BYB0 1731 aa25.85■■□□□ 1.73
PTP4A2-212ENST00000529477 SYT17Q9BSW7 474 aa25.84■■□□□ 1.73
PTP4A2-212ENST00000529477 FHDC1Q9C0D6 1143 aaPredicted RBP25.84■■□□□ 1.73
PTP4A2-212ENST00000529477 MTFR1LQ9H019 292 aa25.84■■□□□ 1.73
PTP4A2-212ENST00000529477 SPG7Q9UQ90 795 aa25.84■■□□□ 1.73
PTP4A2-212ENST00000529477 ATF5Q9Y2D1 282 aaPredicted RBP25.84■■□□□ 1.73
PTP4A2-212ENST00000529477 ZEB1P37275 1124 aaPredicted RBP25.82■■□□□ 1.72
PTP4A2-212ENST00000529477 MTHFSP49914 203 aa25.82■■□□□ 1.72
PTP4A2-212ENST00000529477 SYTL4Q96C24 671 aaPredicted RBP25.82■■□□□ 1.72
PTP4A2-212ENST00000529477 BTAF1O14981 1849 aa25.81■■□□□ 1.72
PTP4A2-212ENST00000529477 PKD1L3Q7Z443 1732 aa25.81■■□□□ 1.72
PTP4A2-212ENST00000529477 IGSF1Q8N6C5 1336 aa25.81■■□□□ 1.72
PTP4A2-212ENST00000529477 MAP3K5Q99683 1374 aa25.81■■□□□ 1.72
PTP4A2-212ENST00000529477 DOT1LQ8TEK3 1739 aa25.8■■□□□ 1.72
PTP4A2-212ENST00000529477 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.8■■□□□ 1.72
PTP4A2-212ENST00000529477 QSER1Q2KHR3 1735 aa25.79■■□□□ 1.72
PTP4A2-212ENST00000529477 PLEKHG2Q9H7P9 1386 aa25.79■■□□□ 1.72
PTP4A2-212ENST00000529477 COL24A1Q17RW2 1714 aa25.78■■□□□ 1.72
PTP4A2-212ENST00000529477 PRIM1P49642 420 aaKnown RBP25.77■■□□□ 1.72
PTP4A2-212ENST00000529477 CYP27B1O15528 508 aa25.74■■□□□ 1.71
PTP4A2-212ENST00000529477 IL13P35225 146 aa25.74■■□□□ 1.71
PTP4A2-212ENST00000529477 DIAPH1O60610 1272 aaKnown RBP25.72■■□□□ 1.71
PTP4A2-212ENST00000529477 PLEKHO1Q53GL0 409 aaPredicted RBP25.72■■□□□ 1.71
PTP4A2-212ENST00000529477 SULT6B1Q6IMI4 303 aa25.72■■□□□ 1.71
PTP4A2-212ENST00000529477 IFNL2Q8IZJ0 200 aa25.72■■□□□ 1.71
PTP4A2-212ENST00000529477 ARXQ96QS3 562 aa25.72■■□□□ 1.71
PTP4A2-212ENST00000529477 GOLGB1Q14789 3259 aaKnown RBP25.72■■□□□ 1.71
PTP4A2-212ENST00000529477 AMOTQ4VCS5 1084 aa25.7■■□□□ 1.7
PTP4A2-212ENST00000529477 CFAP53Q96M91 514 aa25.7■■□□□ 1.7
PTP4A2-212ENST00000529477 TUBGCP6Q96RT7 1819 aa25.69■■□□□ 1.7
PTP4A2-212ENST00000529477 PHKG2P15735 406 aa25.68■■□□□ 1.7
PTP4A2-212ENST00000529477 C1QTNF8P60827 252 aa25.68■■□□□ 1.7
PTP4A2-212ENST00000529477 NKX1-1Q15270 411 aaPredicted RBP25.68■■□□□ 1.7
PTP4A2-212ENST00000529477 AEBP1Q8IUX7 1158 aa25.68■■□□□ 1.7
PTP4A2-212ENST00000529477 KDRP35968 1356 aa25.68■■□□□ 1.7
PTP4A2-212ENST00000529477 HSP90AB1P08238 724 aaKnown RBP25.67■■□□□ 1.7
PTP4A2-212ENST00000529477 ZNF827Q17R98 1081 aa25.67■■□□□ 1.7
PTP4A2-212ENST00000529477 SLC27A3Q5K4L6 730 aa25.67■■□□□ 1.7
PTP4A2-212ENST00000529477 MPRIPQ6WCQ1 1025 aa25.67■■□□□ 1.7
PTP4A2-212ENST00000529477 ITGB4P16144 1822 aa25.65■■□□□ 1.7
PTP4A2-212ENST00000529477 SENP3-EIF4A1A0A087X0R7 540 aa25.65■■□□□ 1.7
PTP4A2-212ENST00000529477 C1orf141Q5JVX7 400 aa25.65■■□□□ 1.7
PTP4A2-212ENST00000529477 ZNF530Q6P9A1 599 aaPredicted RBP25.65■■□□□ 1.7
PTP4A2-212ENST00000529477 LRRC4BQ9NT99 713 aa25.64■■□□□ 1.7
PTP4A2-212ENST00000529477 TOGARAM1Q9Y4F4 1720 aa25.63■■□□□ 1.69
PTP4A2-212ENST00000529477 U2SURPO15042 1029 aaKnown RBP25.63■■□□□ 1.69
PTP4A2-212ENST00000529477 HMOX1P09601 288 aa25.63■■□□□ 1.69
PTP4A2-212ENST00000529477 HMGB2P26583 209 aaKnown RBP25.62■■□□□ 1.69
PTP4A2-212ENST00000529477 PPP2R1AP30153 589 aa25.62■■□□□ 1.69
PTP4A2-212ENST00000529477 TMOD3Q9NYL9 352 aa25.62■■□□□ 1.69
PTP4A2-212ENST00000529477 LY75O60449 1722 aa25.62■■□□□ 1.69
PTP4A2-212ENST00000529477 SMARCC1Q92922 1105 aaPredicted RBP25.61■■□□□ 1.69
PTP4A2-212ENST00000529477 AKT1S1Q96B36 256 aa25.61■■□□□ 1.69
PTP4A2-212ENST00000529477 DCAF5Q96JK2 942 aa25.61■■□□□ 1.69
PTP4A2-212ENST00000529477 NUDCQ9Y266 331 aa25.61■■□□□ 1.69
PTP4A2-212ENST00000529477 COL3A1P02461 1466 aaPredicted RBP25.6■■□□□ 1.69
PTP4A2-212ENST00000529477 DDX10Q13206 875 aaKnown RBP25.6■■□□□ 1.69
PTP4A2-212ENST00000529477 SLC16A10Q8TF71 515 aa25.6■■□□□ 1.69
PTP4A2-212ENST00000529477 CCNL1Q9UK58 526 aaPredicted RBP25.6■■□□□ 1.69
PTP4A2-212ENST00000529477 CEP350Q5VT06 3117 aa25.6■■□□□ 1.69
PTP4A2-212ENST00000529477 PALLDQ8WX93 1383 aa25.57■■□□□ 1.68
PTP4A2-212ENST00000529477 ERVV-2B6SEH9 535 aa25.57■■□□□ 1.68
PTP4A2-212ENST00000529477 PIGBQ92521 554 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms