RNA–Protein interactions for RNA: ENST00000529011.1

TRIM29-211, Transcript of tripartite motif containing 29, humanhuman

TSL 4

Gene TRIM29, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-211ENST00000529011 EP400Q96L91 3159 aa13.99□□□□□ -0.17
TRIM29-211ENST00000529011 PARP4Q9UKK3 1724 aaKnown RBP13.98□□□□□ -0.17
TRIM29-211ENST00000529011 BCL9O00512 1426 aa13.98□□□□□ -0.17
TRIM29-211ENST00000529011 TNS2Q63HR2 1409 aa13.98□□□□□ -0.17
TRIM29-211ENST00000529011 NPC1L1Q9UHC9 1359 aa13.97□□□□□ -0.17
TRIM29-211ENST00000529011 PLSCR1O15162 318 aa13.97□□□□□ -0.17
TRIM29-211ENST00000529011 PEAK1Q9H792 1746 aa13.97□□□□□ -0.17
TRIM29-211ENST00000529011 MSH5O43196 834 aa13.96□□□□□ -0.17
TRIM29-211ENST00000529011 MEGF6O75095 1541 aa13.95□□□□□ -0.18
TRIM29-211ENST00000529011 LRRC37A3O60309 1634 aa13.95□□□□□ -0.18
TRIM29-211ENST00000529011 IL13P35225 146 aa13.95□□□□□ -0.18
TRIM29-211ENST00000529011 PRIM1P49642 420 aaKnown RBP13.95□□□□□ -0.18
TRIM29-211ENST00000529011 SPG7Q9UQ90 795 aa13.95□□□□□ -0.18
TRIM29-211ENST00000529011 PROM2Q8N271 834 aa13.94□□□□□ -0.18
TRIM29-211ENST00000529011 SYTL4Q96C24 671 aaPredicted RBP13.94□□□□□ -0.18
TRIM29-211ENST00000529011 IGSF1Q8N6C5 1336 aa13.93□□□□□ -0.18
TRIM29-211ENST00000529011 CYP27B1O15528 508 aa13.93□□□□□ -0.18
TRIM29-211ENST00000529011 DDX10Q13206 875 aaKnown RBP13.93□□□□□ -0.18
TRIM29-211ENST00000529011 MAPK8IP2Q13387 824 aaPredicted RBP13.93□□□□□ -0.18
TRIM29-211ENST00000529011 SULT6B1Q6IMI4 303 aa13.93□□□□□ -0.18
TRIM29-211ENST00000529011 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.93□□□□□ -0.18
TRIM29-211ENST00000529011 DIAPH1O60610 1272 aaKnown RBP13.92□□□□□ -0.18
TRIM29-211ENST00000529011 NBPF14Q5TI25 921 aa13.92□□□□□ -0.18
TRIM29-211ENST00000529011 AEBP1Q8IUX7 1158 aa13.92□□□□□ -0.18
TRIM29-211ENST00000529011 PARD3Q8TEW0 1356 aa13.92□□□□□ -0.18
TRIM29-211ENST00000529011 PCDH11XQ9BZA7 1347 aa13.91□□□□□ -0.18
TRIM29-211ENST00000529011 PCDH11YQ9BZA8 1340 aa13.91□□□□□ -0.18
TRIM29-211ENST00000529011 PSDA5PKW4 1024 aaPredicted RBP13.91□□□□□ -0.18
TRIM29-211ENST00000529011 R3HDM1Q15032 1099 aaKnown RBP13.91□□□□□ -0.18
TRIM29-211ENST00000529011 TXNRD1Q16881 649 aa13.91□□□□□ -0.18
TRIM29-211ENST00000529011 MAP2P11137 1827 aaKnown RBP13.91□□□□□ -0.18
TRIM29-211ENST00000529011 PPP2R1AP30153 589 aa13.9□□□□□ -0.18
TRIM29-211ENST00000529011 NKX1-1Q15270 411 aaPredicted RBP13.9□□□□□ -0.18
TRIM29-211ENST00000529011 PLEKHO1Q53GL0 409 aaPredicted RBP13.9□□□□□ -0.18
TRIM29-211ENST00000529011 IFNL2Q8IZJ0 200 aa13.9□□□□□ -0.18
TRIM29-211ENST00000529011 FAM208AQ9UK61 1670 aaKnown RBP13.9□□□□□ -0.18
TRIM29-211ENST00000529011 NCAPD2Q15021 1401 aa13.9□□□□□ -0.19
TRIM29-211ENST00000529011 RGPD1P0DJD0 1748 aa13.89□□□□□ -0.19
TRIM29-211ENST00000529011 ANKRD26Q9UPS8 1709 aa13.89□□□□□ -0.19
TRIM29-211ENST00000529011 RGPD2P0DJD1 1756 aa13.88□□□□□ -0.19
TRIM29-211ENST00000529011 HMOX1P09601 288 aa13.88□□□□□ -0.19
TRIM29-211ENST00000529011 PHKG2P15735 406 aa13.88□□□□□ -0.19
TRIM29-211ENST00000529011 AMOTQ4VCS5 1084 aa13.88□□□□□ -0.19
TRIM29-211ENST00000529011 MPRIPQ6WCQ1 1025 aa13.88□□□□□ -0.19
TRIM29-211ENST00000529011 CFAP53Q96M91 514 aa13.88□□□□□ -0.19
TRIM29-211ENST00000529011 U2SURPO15042 1029 aaKnown RBP13.87□□□□□ -0.19
TRIM29-211ENST00000529011 WNK3Q9BYP7 1800 aa13.87□□□□□ -0.19
TRIM29-211ENST00000529011 TNS1Q9HBL0 1735 aaKnown RBP13.85□□□□□ -0.19
TRIM29-211ENST00000529011 ZNF530Q6P9A1 599 aaPredicted RBP13.85□□□□□ -0.19
TRIM29-211ENST00000529011 HSP90AB1P08238 724 aaKnown RBP13.84□□□□□ -0.19
TRIM29-211ENST00000529011 KCNQ4P56696 695 aa13.84□□□□□ -0.19
TRIM29-211ENST00000529011 PIGBQ92521 554 aa13.84□□□□□ -0.19
TRIM29-211ENST00000529011 LRRC4BQ9NT99 713 aa13.84□□□□□ -0.19
TRIM29-211ENST00000529011 NUDCQ9Y266 331 aa13.84□□□□□ -0.19
TRIM29-211ENST00000529011 KDRP35968 1356 aa13.83□□□□□ -0.19
TRIM29-211ENST00000529011 ATXN8OSP0DMR3 200 aa13.83□□□□□ -0.2
TRIM29-211ENST00000529011 C1orf141Q5JVX7 400 aa13.83□□□□□ -0.2
TRIM29-211ENST00000529011 SLC27A3Q5K4L6 730 aa13.83□□□□□ -0.2
TRIM29-211ENST00000529011 DCAF5Q96JK2 942 aa13.83□□□□□ -0.2
TRIM29-211ENST00000529011 STK32BQ9NY57 414 aa13.83□□□□□ -0.2
TRIM29-211ENST00000529011 RALBP1Q15311 655 aa13.82□□□□□ -0.2
TRIM29-211ENST00000529011 SLC15A2Q16348 729 aa13.82□□□□□ -0.2
TRIM29-211ENST00000529011 ANO8Q9HCE9 1232 aaPredicted RBP13.82□□□□□ -0.2
TRIM29-211ENST00000529011 TMOD3Q9NYL9 352 aa13.82□□□□□ -0.2
TRIM29-211ENST00000529011 PLEKHG2Q9H7P9 1386 aa13.82□□□□□ -0.2
TRIM29-211ENST00000529011 ERVV-2B6SEH9 535 aa13.81□□□□□ -0.2
TRIM29-211ENST00000529011 U2AF1L5P0DN76 240 aaPredicted RBP13.81□□□□□ -0.2
TRIM29-211ENST00000529011 U2AF1Q01081 240 aaKnown RBP eCLIP13.81□□□□□ -0.2
TRIM29-211ENST00000529011 MTHFSDQ2M296 383 aaKnown RBP13.81□□□□□ -0.2
TRIM29-211ENST00000529011 CCNL1Q9UK58 526 aaPredicted RBP13.81□□□□□ -0.2
TRIM29-211ENST00000529011 SBF2Q86WG5 1849 aa13.8□□□□□ -0.2
TRIM29-211ENST00000529011 ZNF316A6NFI3 1004 aaPredicted RBP13.8□□□□□ -0.2
TRIM29-211ENST00000529011 CABP4P57796 275 aa13.8□□□□□ -0.2
TRIM29-211ENST00000529011 AKAP4Q5JQC9 854 aa13.8□□□□□ -0.2
TRIM29-211ENST00000529011 SMARCC1Q92922 1105 aaPredicted RBP13.8□□□□□ -0.2
TRIM29-211ENST00000529011 FKBP8Q14318 412 aa13.79□□□□□ -0.2
TRIM29-211ENST00000529011 NFATC2IPQ8NCF5 419 aa13.79□□□□□ -0.2
TRIM29-211ENST00000529011 LGR6Q9HBX8 967 aa13.79□□□□□ -0.2
TRIM29-211ENST00000529011 ATG3Q9NT62 314 aa13.79□□□□□ -0.2
TRIM29-211ENST00000529011 ASAP1Q9ULH1 1129 aa13.79□□□□□ -0.2
TRIM29-211ENST00000529011 NHSQ6T4R5 1651 aa13.79□□□□□ -0.2
TRIM29-211ENST00000529011 SLC4A2P04920 1241 aa13.78□□□□□ -0.2
TRIM29-211ENST00000529011 PRKAR2BP31323 418 aa13.78□□□□□ -0.2
TRIM29-211ENST00000529011 PHACTR3Q96KR7 559 aa13.78□□□□□ -0.2
TRIM29-211ENST00000529011 PDGFDQ9GZP0 370 aaPredicted RBP13.78□□□□□ -0.2
TRIM29-211ENST00000529011 COL3A1P02461 1466 aaPredicted RBP13.78□□□□□ -0.2
TRIM29-211ENST00000529011 FCHSD2O94868 740 aa13.77□□□□□ -0.21
TRIM29-211ENST00000529011 ZNF827Q17R98 1081 aa13.77□□□□□ -0.21
TRIM29-211ENST00000529011 PALLDQ8WX93 1383 aa13.77□□□□□ -0.21
TRIM29-211ENST00000529011 AKT1S1Q96B36 256 aa13.77□□□□□ -0.21
TRIM29-211ENST00000529011 SHANK3Q9BYB0 1731 aa13.77□□□□□ -0.21
TRIM29-211ENST00000529011 RSPH6AQ9H0K4 717 aa13.77□□□□□ -0.21
TRIM29-211ENST00000529011 TFCP2L1Q9NZI6 479 aa13.76□□□□□ -0.21
TRIM29-211ENST00000529011 KAT6BQ8WYB5 2073 aa13.75□□□□□ -0.21
TRIM29-211ENST00000529011 LOC102724428A0A0B4J2F2 783 aa13.75□□□□□ -0.21
TRIM29-211ENST00000529011 RNMTO43148 476 aaKnown RBP13.75□□□□□ -0.21
TRIM29-211ENST00000529011 HMGB2P26583 209 aaKnown RBP13.75□□□□□ -0.21
TRIM29-211ENST00000529011 SIK1P57059 783 aa13.75□□□□□ -0.21
TRIM29-211ENST00000529011 GAS2L2Q8NHY3 880 aa13.75□□□□□ -0.21
TRIM29-211ENST00000529011 PKD1L3Q7Z443 1732 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms