RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 PLEKHO1Q53GL0 409 aaPredicted RBP32.5■■■□□ 2.79
LDLRAD3-203ENST00000528989 PHF23Q9BUL5 403 aaPredicted RBP32.5■■■□□ 2.79
LDLRAD3-203ENST00000528989 ZNF521Q96K83 1311 aa32.5■■■□□ 2.79
LDLRAD3-203ENST00000528989 GAS2L2Q8NHY3 880 aa32.49■■■□□ 2.79
LDLRAD3-203ENST00000528989 DCTN1Q14203 1278 aa32.48■■■□□ 2.79
LDLRAD3-203ENST00000528989 VPS72Q15906 364 aa32.48■■■□□ 2.79
LDLRAD3-203ENST00000528989 THUMPD2Q9BTF0 503 aaKnown RBP32.48■■■□□ 2.79
LDLRAD3-203ENST00000528989 CCDC27Q2M243 656 aa32.47■■■□□ 2.79
LDLRAD3-203ENST00000528989 AMOTQ4VCS5 1084 aa32.47■■■□□ 2.79
LDLRAD3-203ENST00000528989 CDCA7LQ96GN5 454 aa32.47■■■□□ 2.79
LDLRAD3-203ENST00000528989 NGEFQ8N5V2 710 aa32.46■■■□□ 2.79
LDLRAD3-203ENST00000528989 ZNF530Q6P9A1 599 aaPredicted RBP32.46■■■□□ 2.79
LDLRAD3-203ENST00000528989 MCM10Q7L590 875 aa32.44■■■□□ 2.78
LDLRAD3-203ENST00000528989 OVOS2A0A0G2JMS6 1433 aa32.44■■■□□ 2.78
LDLRAD3-203ENST00000528989 NCBP3Q53F19 620 aaKnown RBP32.44■■■□□ 2.78
LDLRAD3-203ENST00000528989 SPINK5Q9NQ38 1064 aaPredicted RBP32.44■■■□□ 2.78
LDLRAD3-203ENST00000528989 SPG7Q9UQ90 795 aa32.42■■■□□ 2.78
LDLRAD3-203ENST00000528989 ZCRB1Q8TBF4 217 aaKnown RBP32.42■■■□□ 2.78
LDLRAD3-203ENST00000528989 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.42■■■□□ 2.78
LDLRAD3-203ENST00000528989 THRAP3Q9Y2W1 955 aaKnown RBP32.42■■■□□ 2.78
LDLRAD3-203ENST00000528989 GNAT3A8MTJ3 354 aa32.41■■■□□ 2.78
LDLRAD3-203ENST00000528989 DISP2A7MBM2 1401 aa32.4■■■□□ 2.78
LDLRAD3-203ENST00000528989 CYP27B1O15528 508 aa32.4■■■□□ 2.78
LDLRAD3-203ENST00000528989 DLG5Q8TDM6 1919 aa32.4■■■□□ 2.78
LDLRAD3-203ENST00000528989 FAM98CQ17RN3 349 aaKnown RBP32.4■■■□□ 2.78
LDLRAD3-203ENST00000528989 QTRT2Q9H974 415 aaKnown RBP32.39■■■□□ 2.78
LDLRAD3-203ENST00000528989 GOLGA2Q08379 1002 aa32.38■■■□□ 2.77
LDLRAD3-203ENST00000528989 AKAP4Q5JQC9 854 aa32.38■■■□□ 2.77
LDLRAD3-203ENST00000528989 MAP3K5Q99683 1374 aa32.38■■■□□ 2.77
LDLRAD3-203ENST00000528989 C1orf141Q5JVX7 400 aa32.37■■■□□ 2.77
LDLRAD3-203ENST00000528989 BARGINQ6ZT62 677 aa32.37■■■□□ 2.77
LDLRAD3-203ENST00000528989 IL17REQ8NFR9 667 aa32.37■■■□□ 2.77
LDLRAD3-203ENST00000528989 RTF1Q92541 710 aaKnown RBP32.37■■■□□ 2.77
LDLRAD3-203ENST00000528989 GJD4Q96KN9 370 aaPredicted RBP32.37■■■□□ 2.77
LDLRAD3-203ENST00000528989 LGR6Q9HBX8 967 aa32.37■■■□□ 2.77
LDLRAD3-203ENST00000528989 LMOD3Q0VAK6 560 aa32.37■■■□□ 2.77
LDLRAD3-203ENST00000528989 MPRIPQ6WCQ1 1025 aa32.37■■■□□ 2.77
LDLRAD3-203ENST00000528989 DDX54Q8TDD1 881 aaKnown RBP32.37■■■□□ 2.77
LDLRAD3-203ENST00000528989 TRPC5Q9UL62 973 aaPredicted RBP32.37■■■□□ 2.77
LDLRAD3-203ENST00000528989 PHKG2P15735 406 aa32.36■■■□□ 2.77
LDLRAD3-203ENST00000528989 ILDR1Q86SU0 546 aaPredicted RBP32.36■■■□□ 2.77
LDLRAD3-203ENST00000528989 WDR63Q8IWG1 891 aa32.36■■■□□ 2.77
LDLRAD3-203ENST00000528989 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.35■■■□□ 2.77
LDLRAD3-203ENST00000528989 ATRNO75882 1429 aa32.34■■■□□ 2.77
LDLRAD3-203ENST00000528989 IFNL2Q8IZJ0 200 aa32.33■■■□□ 2.77
LDLRAD3-203ENST00000528989 PARP4Q9UKK3 1724 aaKnown RBP32.33■■■□□ 2.77
LDLRAD3-203ENST00000528989 PLEKHG2Q9H7P9 1386 aa32.32■■■□□ 2.76
LDLRAD3-203ENST00000528989 EXOC5O00471 708 aa32.32■■■□□ 2.76
LDLRAD3-203ENST00000528989 HTATSF1O43719 755 aaKnown RBP32.32■■■□□ 2.76
LDLRAD3-203ENST00000528989 PDE3BQ13370 1112 aa32.32■■■□□ 2.76
LDLRAD3-203ENST00000528989 SLFN5Q08AF3 891 aa32.31■■■□□ 2.76
LDLRAD3-203ENST00000528989 CDCA7Q9BWT1 371 aaPredicted RBP32.31■■■□□ 2.76
LDLRAD3-203ENST00000528989 PCDH11XQ9BZA7 1347 aa32.31■■■□□ 2.76
LDLRAD3-203ENST00000528989 PCDH11YQ9BZA8 1340 aa32.31■■■□□ 2.76
LDLRAD3-203ENST00000528989 PKD1L3Q7Z443 1732 aa32.31■■■□□ 2.76
LDLRAD3-203ENST00000528989 LAS1LQ9Y4W2 734 aaKnown RBP32.3■■■□□ 2.76
LDLRAD3-203ENST00000528989 DDB1Q16531 1140 aa32.29■■■□□ 2.76
LDLRAD3-203ENST00000528989 GLI3P10071 1580 aa32.28■■■□□ 2.76
LDLRAD3-203ENST00000528989 RNMTO43148 476 aaKnown RBP32.28■■■□□ 2.76
LDLRAD3-203ENST00000528989 A0A0G2JS52 829 aa32.27■■■□□ 2.76
LDLRAD3-203ENST00000528989 MYT1Q01538 1121 aa32.27■■■□□ 2.76
LDLRAD3-203ENST00000528989 ZNF772Q68DY9 489 aaPredicted RBP32.27■■■□□ 2.76
LDLRAD3-203ENST00000528989 RGS17Q9UGC6 210 aaPredicted RBP32.27■■■□□ 2.76
LDLRAD3-203ENST00000528989 E9PSI1 815 aa32.27■■■□□ 2.76
LDLRAD3-203ENST00000528989 DUSP27Q5VZP5 1158 aa32.26■■■□□ 2.75
LDLRAD3-203ENST00000528989 TRMT2AQ8IZ69 625 aaKnown RBP32.26■■■□□ 2.75
LDLRAD3-203ENST00000528989 TSR2Q969E8 191 aaKnown RBP32.26■■■□□ 2.75
LDLRAD3-203ENST00000528989 CENPBP07199 599 aaPredicted RBP32.25■■■□□ 2.75
LDLRAD3-203ENST00000528989 CEMIPQ8WUJ3 1361 aa32.25■■■□□ 2.75
LDLRAD3-203ENST00000528989 MIS18AQ9NYP9 233 aa32.25■■■□□ 2.75
LDLRAD3-203ENST00000528989 KDM6AO15550 1401 aaPredicted RBP32.25■■■□□ 2.75
LDLRAD3-203ENST00000528989 WNK3Q9BYP7 1800 aa32.24■■■□□ 2.75
LDLRAD3-203ENST00000528989 SHANK3Q9BYB0 1731 aa32.24■■■□□ 2.75
LDLRAD3-203ENST00000528989 IL16Q14005 1332 aa32.23■■■□□ 2.75
LDLRAD3-203ENST00000528989 DCAF5Q96JK2 942 aa32.23■■■□□ 2.75
LDLRAD3-203ENST00000528989 CALD1Q05682 793 aaKnown RBP32.23■■■□□ 2.75
LDLRAD3-203ENST00000528989 ZNF853P0CG23 659 aa32.22■■■□□ 2.75
LDLRAD3-203ENST00000528989 TNS2Q63HR2 1409 aa32.22■■■□□ 2.75
LDLRAD3-203ENST00000528989 ONECUT3O60422 494 aaPredicted RBP32.21■■■□□ 2.75
LDLRAD3-203ENST00000528989 NKX1-1Q15270 411 aaPredicted RBP32.21■■■□□ 2.75
LDLRAD3-203ENST00000528989 CFAP44Q96MT7 982 aa32.21■■■□□ 2.75
LDLRAD3-203ENST00000528989 MARCH10Q8NA82 808 aaPredicted RBP32.2■■■□□ 2.75
LDLRAD3-203ENST00000528989 IFT57Q9NWB7 429 aa32.2■■■□□ 2.74
LDLRAD3-203ENST00000528989 HSP90AB1P08238 724 aaKnown RBP32.19■■■□□ 2.74
LDLRAD3-203ENST00000528989 MBIPQ9NS73 344 aa32.19■■■□□ 2.74
LDLRAD3-203ENST00000528989 FANCIQ9NVI1 1328 aa32.19■■■□□ 2.74
LDLRAD3-203ENST00000528989 LRRC37A3O60309 1634 aa32.18■■■□□ 2.74
LDLRAD3-203ENST00000528989 GNAI1P63096 354 aa32.18■■■□□ 2.74
LDLRAD3-203ENST00000528989 SEPT12Q8IYM1 358 aa32.18■■■□□ 2.74
LDLRAD3-203ENST00000528989 MYH16Q9H6N6 1097 aa32.18■■■□□ 2.74
LDLRAD3-203ENST00000528989 CHL1O00533 1208 aa32.17■■■□□ 2.74
LDLRAD3-203ENST00000528989 TEFQ10587 303 aa32.17■■■□□ 2.74
LDLRAD3-203ENST00000528989 TAF7Q15545 349 aaPredicted RBP32.17■■■□□ 2.74
LDLRAD3-203ENST00000528989 NFATC2IPQ8NCF5 419 aa32.17■■■□□ 2.74
LDLRAD3-203ENST00000528989 POTEAQ6S8J7 498 aa32.15■■■□□ 2.74
LDLRAD3-203ENST00000528989 RBM6P78332 1123 aaKnown RBP32.14■■■□□ 2.74
LDLRAD3-203ENST00000528989 SLC52A2Q9HAB3 445 aa32.14■■■□□ 2.74
LDLRAD3-203ENST00000528989 FAM182BQ5T319 152 aa32.13■■■□□ 2.73
LDLRAD3-203ENST00000528989 TSPYL4Q9UJ04 414 aa32.13■■■□□ 2.73
LDLRAD3-203ENST00000528989 THSD7AQ9UPZ6 1657 aa32.13■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms