RNA–Protein interactions for RNA: ENST00000528824.1

SNX7-204, Transcript of sorting nexin 7, humanhuman

TSL 1 (best)

Gene SNX7, Length 1,562 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX7-204ENST00000528824 AXIN2Q9Y2T1 843 aa11.07□□□□□ -0.64
SNX7-204ENST00000528824 TTC21AQ8NDW8 1320 aa11.07□□□□□ -0.64
SNX7-204ENST00000528824 IL2RBP14784 551 aa11.07□□□□□ -0.64
SNX7-204ENST00000528824 ACSBG1Q96GR2 724 aa11.07□□□□□ -0.64
SNX7-204ENST00000528824 EVC2Q86UK5 1308 aa11.05□□□□□ -0.64
SNX7-204ENST00000528824 HSPA6P17066 643 aa11.05□□□□□ -0.64
SNX7-204ENST00000528824 NLRP2Q9NX02 1062 aa11.05□□□□□ -0.64
SNX7-204ENST00000528824 SOX12O15370 315 aa11.04□□□□□ -0.64
SNX7-204ENST00000528824 WNK3Q9BYP7 1800 aa11.04□□□□□ -0.64
SNX7-204ENST00000528824 ABCC6O95255 1503 aa11.04□□□□□ -0.64
SNX7-204ENST00000528824 NHSQ6T4R5 1651 aa11.04□□□□□ -0.64
SNX7-204ENST00000528824 RAB3GAP2Q9H2M9 1393 aa11.03□□□□□ -0.64
SNX7-204ENST00000528824 PCDH10Q9P2E7 1040 aa11.03□□□□□ -0.64
SNX7-204ENST00000528824 TTC21BQ7Z4L5 1316 aa11.03□□□□□ -0.64
SNX7-204ENST00000528824 KIAA1210Q9ULL0 1709 aa11.03□□□□□ -0.64
SNX7-204ENST00000528824 ZNF827Q17R98 1081 aa11.03□□□□□ -0.64
SNX7-204ENST00000528824 FARP1Q9Y4F1 1045 aaPredicted RBP11.03□□□□□ -0.64
SNX7-204ENST00000528824 GABBR2O75899 941 aa11.02□□□□□ -0.65
SNX7-204ENST00000528824 TRPM1Q7Z4N2 1603 aa11.01□□□□□ -0.65
SNX7-204ENST00000528824 COL18A1P39060 1754 aa11.01□□□□□ -0.65
SNX7-204ENST00000528824 QRICH2Q9H0J4 1663 aa11.01□□□□□ -0.65
SNX7-204ENST00000528824 FLAD1Q8NFF5 587 aa11.01□□□□□ -0.65
SNX7-204ENST00000528824 CD2APQ9Y5K6 639 aa11.01□□□□□ -0.65
SNX7-204ENST00000528824 ATP10DQ9P241 1426 aa11□□□□□ -0.65
SNX7-204ENST00000528824 POTEGQ6S5H5 508 aa11□□□□□ -0.65
SNX7-204ENST00000528824 SYTL4Q96C24 671 aaPredicted RBP11□□□□□ -0.65
SNX7-204ENST00000528824 RTN4Q9NQC3 1192 aaKnown RBP11□□□□□ -0.65
SNX7-204ENST00000528824 LRRC4BQ9NT99 713 aa11□□□□□ -0.65
SNX7-204ENST00000528824 PAPPAQ13219 1627 aa11□□□□□ -0.65
SNX7-204ENST00000528824 ERBB3P21860 1342 aa11□□□□□ -0.65
SNX7-204ENST00000528824 PNPLA7Q6ZV29 1317 aa11□□□□□ -0.65
SNX7-204ENST00000528824 UTRNP46939 3433 aa10.99□□□□□ -0.65
SNX7-204ENST00000528824 NLGN2Q8NFZ4 835 aa10.99□□□□□ -0.65
SNX7-204ENST00000528824 SHANK3Q9BYB0 1731 aa10.99□□□□□ -0.65
SNX7-204ENST00000528824 APLP1P51693 650 aa10.99□□□□□ -0.65
SNX7-204ENST00000528824 DDX54Q8TDD1 881 aaKnown RBP10.99□□□□□ -0.65
SNX7-204ENST00000528824 KTN1Q86UP2 1357 aaKnown RBP10.98□□□□□ -0.65
SNX7-204ENST00000528824 PIK3C2AO00443 1686 aa10.98□□□□□ -0.65
SNX7-204ENST00000528824 QSER1Q2KHR3 1735 aa10.98□□□□□ -0.65
SNX7-204ENST00000528824 YBX3P16989 372 aaKnown RBP eCLIP10.98□□□□□ -0.65
SNX7-204ENST00000528824 NBPF1Q3BBV0 1214 aa10.98□□□□□ -0.65
SNX7-204ENST00000528824 CCNL1Q9UK58 526 aaPredicted RBP10.98□□□□□ -0.65
SNX7-204ENST00000528824 ANKRD24Q8TF21 1146 aa10.97□□□□□ -0.65
SNX7-204ENST00000528824 BTAF1O14981 1849 aa10.97□□□□□ -0.65
SNX7-204ENST00000528824 KAT6BQ8WYB5 2073 aa10.96□□□□□ -0.65
SNX7-204ENST00000528824 MIER1Q8N108 512 aa10.96□□□□□ -0.65
SNX7-204ENST00000528824 FBXO3Q9UK99 471 aa10.96□□□□□ -0.65
SNX7-204ENST00000528824 USP47Q96K76 1375 aa10.96□□□□□ -0.66
SNX7-204ENST00000528824 MNX1P50219 401 aaPredicted RBP10.95□□□□□ -0.66
SNX7-204ENST00000528824 HDGFL2Q7Z4V5 671 aaPredicted RBP10.95□□□□□ -0.66
SNX7-204ENST00000528824 ZNF526Q8TF50 670 aaPredicted RBP10.95□□□□□ -0.66
SNX7-204ENST00000528824 ANKRD36BQ8N2N9 1353 aa10.95□□□□□ -0.66
SNX7-204ENST00000528824 PRIM1P49642 420 aaKnown RBP10.94□□□□□ -0.66
SNX7-204ENST00000528824 USP31Q70CQ4 1352 aa10.94□□□□□ -0.66
SNX7-204ENST00000528824 RGPD5Q99666 1765 aa10.94□□□□□ -0.66
SNX7-204ENST00000528824 NFAT5O94916 1531 aa10.94□□□□□ -0.66
SNX7-204ENST00000528824 C19orf67A6NJJ6 358 aa10.94□□□□□ -0.66
SNX7-204ENST00000528824 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.94□□□□□ -0.66
SNX7-204ENST00000528824 COL24A1Q17RW2 1714 aa10.93□□□□□ -0.66
SNX7-204ENST00000528824 COL23A1Q86Y22 540 aaPredicted RBP10.93□□□□□ -0.66
SNX7-204ENST00000528824 NSD3Q9BZ95 1437 aa10.92□□□□□ -0.66
SNX7-204ENST00000528824 TOMM70O94826 608 aa10.92□□□□□ -0.66
SNX7-204ENST00000528824 ZCRB1Q8TBF4 217 aaKnown RBP10.92□□□□□ -0.66
SNX7-204ENST00000528824 ADCY9O60503 1353 aa10.91□□□□□ -0.66
SNX7-204ENST00000528824 CGNL1Q0VF96 1302 aa10.91□□□□□ -0.66
SNX7-204ENST00000528824 PLCD3Q8N3E9 789 aa10.91□□□□□ -0.66
SNX7-204ENST00000528824 IP6K1Q92551 441 aa10.91□□□□□ -0.66
SNX7-204ENST00000528824 TERF2IPQ9NYB0 399 aa10.91□□□□□ -0.66
SNX7-204ENST00000528824 MSL1Q68DK7 614 aa10.9□□□□□ -0.66
SNX7-204ENST00000528824 C16orf71Q8IYS4 520 aaPredicted RBP10.9□□□□□ -0.66
SNX7-204ENST00000528824 TMC1Q8TDI8 760 aa10.9□□□□□ -0.67
SNX7-204ENST00000528824 SMARCC1Q92922 1105 aaPredicted RBP10.9□□□□□ -0.67
SNX7-204ENST00000528824 AK7Q96M32 723 aa10.9□□□□□ -0.67
SNX7-204ENST00000528824 IGSF1Q8N6C5 1336 aa10.89□□□□□ -0.67
SNX7-204ENST00000528824 AMPHP49418 695 aa10.89□□□□□ -0.67
SNX7-204ENST00000528824 KCNQ4P56696 695 aa10.89□□□□□ -0.67
SNX7-204ENST00000528824 LTV1Q96GA3 475 aaPredicted RBP10.89□□□□□ -0.67
SNX7-204ENST00000528824 ROCK2O75116 1388 aaKnown RBP10.88□□□□□ -0.67
SNX7-204ENST00000528824 KIF3CO14782 793 aa10.88□□□□□ -0.67
SNX7-204ENST00000528824 NME9Q86XW9 330 aa10.88□□□□□ -0.67
SNX7-204ENST00000528824 RAPGEF4Q8WZA2 1011 aa10.88□□□□□ -0.67
SNX7-204ENST00000528824 FAM208AQ9UK61 1670 aaKnown RBP10.88□□□□□ -0.67
SNX7-204ENST00000528824 SLC24A1O60721 1099 aa10.87□□□□□ -0.67
SNX7-204ENST00000528824 LY75O60449 1722 aa10.87□□□□□ -0.67
SNX7-204ENST00000528824 EDC4Q6P2E9 1401 aaKnown RBP10.86□□□□□ -0.67
SNX7-204ENST00000528824 CD44P16070 742 aaKnown RBP10.86□□□□□ -0.67
SNX7-204ENST00000528824 COG3Q96JB2 828 aa10.86□□□□□ -0.67
SNX7-204ENST00000528824 SMG6Q86US8 1419 aaKnown RBP10.86□□□□□ -0.67
SNX7-204ENST00000528824 LTN1O94822 1766 aa10.86□□□□□ -0.67
SNX7-204ENST00000528824 TATP17735 454 aaPredicted RBP10.86□□□□□ -0.67
SNX7-204ENST00000528824 VASPP50552 380 aaPredicted RBP10.86□□□□□ -0.67
SNX7-204ENST00000528824 SSFA2P28290 1259 aa10.85□□□□□ -0.67
SNX7-204ENST00000528824 TGFB2P61812 414 aa10.85□□□□□ -0.67
SNX7-204ENST00000528824 FSTL1Q12841 308 aa10.85□□□□□ -0.67
SNX7-204ENST00000528824 RBM46Q8TBY0 533 aaKnown RBP10.85□□□□□ -0.67
SNX7-204ENST00000528824 SBNO2Q9Y2G9 1366 aa10.85□□□□□ -0.67
SNX7-204ENST00000528824 USP54Q70EL1 1684 aa10.85□□□□□ -0.67
SNX7-204ENST00000528824 PCDH11XQ9BZA7 1347 aa10.84□□□□□ -0.67
SNX7-204ENST00000528824 PCDH11YQ9BZA8 1340 aa10.84□□□□□ -0.67
SNX7-204ENST00000528824 MON2Q7Z3U7 1717 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms