RNA–Protein interactions for RNA: ENST00000528762.1

BRCA2-203, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 4

Gene BRCA2, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-203ENST00000528762 CUEDC1Q9NWM3 386 aaPredicted RBP6.12□□□□□ -1.43
BRCA2-203ENST00000528762 MEN1O00255 615 aa6.11□□□□□ -1.43
BRCA2-203ENST00000528762 UBTFP17480 764 aaKnown RBP6.11□□□□□ -1.43
BRCA2-203ENST00000528762 WHAMMQ8TF30 809 aa6.11□□□□□ -1.43
BRCA2-203ENST00000528762 SNRKQ9NRH2 765 aa6.11□□□□□ -1.43
BRCA2-203ENST00000528762 SCTRP47872 440 aa6.1□□□□□ -1.43
BRCA2-203ENST00000528762 ATP5J2-PTCD1G3V325 749 aa6.09□□□□□ -1.43
BRCA2-203ENST00000528762 GPR37L1O60883 481 aa6.09□□□□□ -1.43
BRCA2-203ENST00000528762 SV2AQ7L0J3 742 aa6.09□□□□□ -1.43
BRCA2-203ENST00000528762 LYSMD3Q7Z3D4 306 aa6.09□□□□□ -1.43
BRCA2-203ENST00000528762 MTMR14Q8NCE2 650 aa6.09□□□□□ -1.43
BRCA2-203ENST00000528762 PCDHB11Q9Y5F2 797 aa6.09□□□□□ -1.43
BRCA2-203ENST00000528762 GPR25O00155 361 aa6.08□□□□□ -1.44
BRCA2-203ENST00000528762 SVOPQ8N4V2 548 aa6.08□□□□□ -1.44
BRCA2-203ENST00000528762 NANOS1Q8WY41 292 aaKnown RBP6.08□□□□□ -1.44
BRCA2-203ENST00000528762 RAB6BQ9NRW1 208 aa6.08□□□□□ -1.44
BRCA2-203ENST00000528762 A0A1W2PRU2 124 aa6.07□□□□□ -1.44
BRCA2-203ENST00000528762 APBB1O00213 710 aa6.07□□□□□ -1.44
BRCA2-203ENST00000528762 NR1H3Q13133 447 aa6.07□□□□□ -1.44
BRCA2-203ENST00000528762 ZNF385CQ66K41 422 aaPredicted RBP6.07□□□□□ -1.44
BRCA2-203ENST00000528762 RIPOR1Q6ZS17 1223 aa6.07□□□□□ -1.44
BRCA2-203ENST00000528762 A6NJR5 290 aa6.06□□□□□ -1.44
BRCA2-203ENST00000528762 POU4F2Q12837 409 aa6.06□□□□□ -1.44
BRCA2-203ENST00000528762 CC2D2BQ6DHV5 1058 aa6.06□□□□□ -1.44
BRCA2-203ENST00000528762 SEPT12Q8IYM1 358 aa6.06□□□□□ -1.44
BRCA2-203ENST00000528762 ARID3AQ99856 593 aa6.06□□□□□ -1.44
BRCA2-203ENST00000528762 ARHGEF10LQ9HCE6 1279 aa6.06□□□□□ -1.44
BRCA2-203ENST00000528762 ERVK-9P63128 1117 aa6.05□□□□□ -1.44
BRCA2-203ENST00000528762 GAS6Q14393 721 aa6.05□□□□□ -1.44
BRCA2-203ENST00000528762 KCTD17Q8N5Z5 321 aa6.05□□□□□ -1.44
BRCA2-203ENST00000528762 GAS2L1Q99501 681 aaPredicted RBP6.05□□□□□ -1.44
BRCA2-203ENST00000528762 CDCA7Q9BWT1 371 aaPredicted RBP6.05□□□□□ -1.44
BRCA2-203ENST00000528762 ADAMTS8Q9UP79 889 aa6.05□□□□□ -1.44
BRCA2-203ENST00000528762 NDUFB9Q9Y6M9 179 aa6.05□□□□□ -1.44
BRCA2-203ENST00000528762 ARID3CA6NKF2 412 aa6.04□□□□□ -1.44
BRCA2-203ENST00000528762 TRAK2O60296 914 aa6.04□□□□□ -1.44
BRCA2-203ENST00000528762 ADAMTS2O95450 1211 aa6.04□□□□□ -1.44
BRCA2-203ENST00000528762 STAU1O95793 577 aaKnown RBP6.04□□□□□ -1.44
BRCA2-203ENST00000528762 GSK3AP49840 483 aa6.04□□□□□ -1.44
BRCA2-203ENST00000528762 RNF144AP50876 292 aaPredicted RBP6.04□□□□□ -1.44
BRCA2-203ENST00000528762 SLC27A3Q5K4L6 730 aa6.04□□□□□ -1.44
BRCA2-203ENST00000528762 CLUAP1Q96AJ1 413 aa6.04□□□□□ -1.44
BRCA2-203ENST00000528762 NLRP3Q96P20 1036 aa6.04□□□□□ -1.44
BRCA2-203ENST00000528762 OSBPL3Q9H4L5 887 aa6.04□□□□□ -1.44
BRCA2-203ENST00000528762 TBC1D2BQ9UPU7 963 aa6.04□□□□□ -1.44
BRCA2-203ENST00000528762 LYPD4Q6UWN0 246 aa6.03□□□□□ -1.44
BRCA2-203ENST00000528762 GTPBP3Q969Y2 492 aaKnown RBP6.03□□□□□ -1.44
BRCA2-203ENST00000528762 ZNF837Q96EG3 531 aaPredicted RBP6.03□□□□□ -1.44
BRCA2-203ENST00000528762 CCDC85AQ96PX6 553 aaPredicted RBP6.03□□□□□ -1.44
BRCA2-203ENST00000528762 RAD21O60216 631 aa6.02□□□□□ -1.45
BRCA2-203ENST00000528762 DBN1Q16643 649 aa6.02□□□□□ -1.45
BRCA2-203ENST00000528762 TSGA10IPQ3SY00 556 aa6.02□□□□□ -1.45
BRCA2-203ENST00000528762 ESF1Q9H501 851 aaKnown RBP6.02□□□□□ -1.45
BRCA2-203ENST00000528762 SLURP2P0DP57 97 aa6.01□□□□□ -1.45
BRCA2-203ENST00000528762 PHKA2P46019 1235 aa6.01□□□□□ -1.45
BRCA2-203ENST00000528762 MCM6Q14566 821 aa6.01□□□□□ -1.45
BRCA2-203ENST00000528762 RNF20Q5VTR2 975 aa6.01□□□□□ -1.45
BRCA2-203ENST00000528762 CYP2U1Q7Z449 544 aa6.01□□□□□ -1.45
BRCA2-203ENST00000528762 BANK1Q8NDB2 785 aa6.01□□□□□ -1.45
BRCA2-203ENST00000528762 GPAMQ9HCL2 828 aa6.01□□□□□ -1.45
BRCA2-203ENST00000528762 ARHGEF15O94989 841 aa6□□□□□ -1.45
BRCA2-203ENST00000528762 IL2RAP01589 272 aa6□□□□□ -1.45
BRCA2-203ENST00000528762 IRS1P35568 1242 aa6□□□□□ -1.45
BRCA2-203ENST00000528762 RASSF7Q02833 373 aa6□□□□□ -1.45
BRCA2-203ENST00000528762 KCNMA1Q12791 1236 aa6□□□□□ -1.45
BRCA2-203ENST00000528762 CLN3Q13286 438 aa6□□□□□ -1.45
BRCA2-203ENST00000528762 NBPF10Q6P3W6 841 aaKnown RBP6□□□□□ -1.45
BRCA2-203ENST00000528762 NBPF15Q8N660 670 aa6□□□□□ -1.45
BRCA2-203ENST00000528762 GDF11O95390 407 aa5.99□□□□□ -1.45
BRCA2-203ENST00000528762 VAC14Q08AM6 782 aa5.99□□□□□ -1.45
BRCA2-203ENST00000528762 TRIM22Q8IYM9 498 aa5.99□□□□□ -1.45
BRCA2-203ENST00000528762 GRIP2Q9C0E4 1043 aa5.99□□□□□ -1.45
BRCA2-203ENST00000528762 TIMMDC1Q9NPL8 285 aa5.99□□□□□ -1.45
BRCA2-203ENST00000528762 CEP126Q9P2H0 1117 aa5.99□□□□□ -1.45
BRCA2-203ENST00000528762 ZNF777Q9ULD5 760 aaPredicted RBP5.99□□□□□ -1.45
BRCA2-203ENST00000528762 ZNF330Q9Y3S2 320 aaPredicted RBP5.99□□□□□ -1.45
BRCA2-203ENST00000528762 WASLO00401 505 aaPredicted RBP5.98□□□□□ -1.45
BRCA2-203ENST00000528762 CELA2BP08218 269 aaPredicted RBP5.98□□□□□ -1.45
BRCA2-203ENST00000528762 GPC1P35052 558 aa5.98□□□□□ -1.45
BRCA2-203ENST00000528762 MARSP56192 900 aaKnown RBP5.98□□□□□ -1.45
BRCA2-203ENST00000528762 IRF5Q13568 498 aa5.98□□□□□ -1.45
BRCA2-203ENST00000528762 OXLD1Q5BKU9 147 aa5.98□□□□□ -1.45
BRCA2-203ENST00000528762 TMEM151AQ8N4L1 468 aa5.98□□□□□ -1.45
BRCA2-203ENST00000528762 CNKSR1Q969H4 720 aa5.98□□□□□ -1.45
BRCA2-203ENST00000528762 PODXL2Q9NZ53 605 aa5.98□□□□□ -1.45
BRCA2-203ENST00000528762 IGF1RP08069 1367 aa5.97□□□□□ -1.45
BRCA2-203ENST00000528762 MYCP01106 439 aaPredicted RBP5.97□□□□□ -1.45
BRCA2-203ENST00000528762 THBS1P07996 1170 aa5.97□□□□□ -1.45
BRCA2-203ENST00000528762 MAP3K10Q02779 954 aa5.97□□□□□ -1.45
BRCA2-203ENST00000528762 CENPCQ03188 943 aa5.97□□□□□ -1.45
BRCA2-203ENST00000528762 SRSF11Q05519 484 aaKnown RBP5.97□□□□□ -1.45
BRCA2-203ENST00000528762 TRIM26Q12899 539 aaPredicted RBP5.97□□□□□ -1.45
BRCA2-203ENST00000528762 TAS1R3Q7RTX0 852 aa5.97□□□□□ -1.45
BRCA2-203ENST00000528762 PROSER2Q86WR7 435 aaPredicted RBP5.97□□□□□ -1.45
BRCA2-203ENST00000528762 GDPD2Q9HCC8 539 aa5.97□□□□□ -1.45
BRCA2-203ENST00000528762 DYRK1BQ9Y463 629 aa5.97□□□□□ -1.45
BRCA2-203ENST00000528762 ABL2P42684 1182 aa5.96□□□□□ -1.46
BRCA2-203ENST00000528762 FNBP4Q8N3X1 1017 aaPredicted RBP5.96□□□□□ -1.46
BRCA2-203ENST00000528762 NUCKS1Q9H1E3 243 aaKnown RBP5.96□□□□□ -1.46
BRCA2-203ENST00000528762 MBIPQ9NS73 344 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms