RNA–Protein interactions for RNA: ENST00000528699.1

SIPA1-204, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 2

Gene SIPA1, Length 548 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-204ENST00000528699 CGNL1Q0VF96 1302 aa14.91□□□□□ -0.02
SIPA1-204ENST00000528699 USHBP1Q8N6Y0 703 aa14.9□□□□□ -0.02
SIPA1-204ENST00000528699 DDX54Q8TDD1 881 aaKnown RBP14.9□□□□□ -0.02
SIPA1-204ENST00000528699 NSD2O96028 1365 aa14.89□□□□□ -0.03
SIPA1-204ENST00000528699 ZCRB1Q8TBF4 217 aaKnown RBP14.89□□□□□ -0.03
SIPA1-204ENST00000528699 SLC15A2Q16348 729 aa14.88□□□□□ -0.03
SIPA1-204ENST00000528699 PDGFDQ9GZP0 370 aaPredicted RBP14.88□□□□□ -0.03
SIPA1-204ENST00000528699 SPON1Q9HCB6 807 aa14.88□□□□□ -0.03
SIPA1-204ENST00000528699 STK32BQ9NY57 414 aa14.88□□□□□ -0.03
SIPA1-204ENST00000528699 PKD1L3Q7Z443 1732 aa14.87□□□□□ -0.03
SIPA1-204ENST00000528699 WASHC2AQ641Q2 1341 aa14.87□□□□□ -0.03
SIPA1-204ENST00000528699 MAP2P11137 1827 aaKnown RBP14.87□□□□□ -0.03
SIPA1-204ENST00000528699 LY75O60449 1722 aa14.86□□□□□ -0.03
SIPA1-204ENST00000528699 RAPGEF4Q8WZA2 1011 aa14.86□□□□□ -0.03
SIPA1-204ENST00000528699 POLR3GLQ9BT43 218 aa14.86□□□□□ -0.03
SIPA1-204ENST00000528699 KAT6BQ8WYB5 2073 aa14.86□□□□□ -0.03
SIPA1-204ENST00000528699 TATP17735 454 aaPredicted RBP14.85□□□□□ -0.03
SIPA1-204ENST00000528699 LRRC4BQ9NT99 713 aa14.85□□□□□ -0.03
SIPA1-204ENST00000528699 PRIM1P49642 420 aaKnown RBP14.84□□□□□ -0.03
SIPA1-204ENST00000528699 POLKQ9UBT6 870 aa14.84□□□□□ -0.03
SIPA1-204ENST00000528699 PCDH11XQ9BZA7 1347 aa14.84□□□□□ -0.03
SIPA1-204ENST00000528699 PCDH11YQ9BZA8 1340 aa14.84□□□□□ -0.03
SIPA1-204ENST00000528699 QSER1Q2KHR3 1735 aa14.83□□□□□ -0.03
SIPA1-204ENST00000528699 TOGARAM1Q9Y4F4 1720 aa14.83□□□□□ -0.03
SIPA1-204ENST00000528699 ZNF827Q17R98 1081 aa14.83□□□□□ -0.04
SIPA1-204ENST00000528699 SLC27A3Q5K4L6 730 aa14.83□□□□□ -0.04
SIPA1-204ENST00000528699 PANK3Q9H999 370 aa14.83□□□□□ -0.04
SIPA1-204ENST00000528699 PPM1GO15355 546 aaPredicted RBP14.82□□□□□ -0.04
SIPA1-204ENST00000528699 ZBTB7AO95365 584 aa14.82□□□□□ -0.04
SIPA1-204ENST00000528699 PTGER2P43116 358 aa14.82□□□□□ -0.04
SIPA1-204ENST00000528699 SYTL4Q96C24 671 aaPredicted RBP14.82□□□□□ -0.04
SIPA1-204ENST00000528699 CYP27B1O15528 508 aa14.81□□□□□ -0.04
SIPA1-204ENST00000528699 AKT1S1Q96B36 256 aa14.81□□□□□ -0.04
SIPA1-204ENST00000528699 TUBGCP6Q96RT7 1819 aa14.8□□□□□ -0.04
SIPA1-204ENST00000528699 EYA1Q99502 592 aa14.8□□□□□ -0.04
SIPA1-204ENST00000528699 SGIP1Q9BQI5 828 aa14.8□□□□□ -0.04
SIPA1-204ENST00000528699 PPP1R1BQ9UD71 204 aaPredicted RBP14.8□□□□□ -0.04
SIPA1-204ENST00000528699 PLEKHG2Q9H7P9 1386 aa14.8□□□□□ -0.04
SIPA1-204ENST00000528699 TNNT2P45379 298 aaPredicted RBP14.79□□□□□ -0.04
SIPA1-204ENST00000528699 KIF7Q2M1P5 1343 aa14.79□□□□□ -0.04
SIPA1-204ENST00000528699 MTFR1LQ9H019 292 aa14.79□□□□□ -0.04
SIPA1-204ENST00000528699 EIF4A2Q14240 407 aaKnown RBP14.78□□□□□ -0.04
SIPA1-204ENST00000528699 ITGB4P16144 1822 aa14.78□□□□□ -0.04
SIPA1-204ENST00000528699 COL24A1Q17RW2 1714 aa14.78□□□□□ -0.04
SIPA1-204ENST00000528699 IGSF1Q8N6C5 1336 aa14.77□□□□□ -0.04
SIPA1-204ENST00000528699 NKX1-1Q15270 411 aaPredicted RBP14.77□□□□□ -0.05
SIPA1-204ENST00000528699 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.77□□□□□ -0.05
SIPA1-204ENST00000528699 ATF5Q9Y2D1 282 aaPredicted RBP14.77□□□□□ -0.05
SIPA1-204ENST00000528699 PNPLA7Q6ZV29 1317 aa14.76□□□□□ -0.05
SIPA1-204ENST00000528699 KCNQ4P56696 695 aa14.76□□□□□ -0.05
SIPA1-204ENST00000528699 CCNL1Q9UK58 526 aaPredicted RBP14.76□□□□□ -0.05
SIPA1-204ENST00000528699 C5P01031 1676 aa14.76□□□□□ -0.05
SIPA1-204ENST00000528699 PALLDQ8WX93 1383 aa14.75□□□□□ -0.05
SIPA1-204ENST00000528699 SPG7Q9UQ90 795 aa14.75□□□□□ -0.05
SIPA1-204ENST00000528699 TAF1LQ8IZX4 1826 aa14.74□□□□□ -0.05
SIPA1-204ENST00000528699 AMER1Q5JTC6 1135 aaPredicted RBP14.74□□□□□ -0.05
SIPA1-204ENST00000528699 MORC1Q86VD1 984 aa14.74□□□□□ -0.05
SIPA1-204ENST00000528699 KNSTRNQ9Y448 316 aa14.74□□□□□ -0.05
SIPA1-204ENST00000528699 UTRNP46939 3433 aa14.73□□□□□ -0.05
SIPA1-204ENST00000528699 MPRIPQ6WCQ1 1025 aa14.73□□□□□ -0.05
SIPA1-204ENST00000528699 SLC16A10Q8TF71 515 aa14.73□□□□□ -0.05
SIPA1-204ENST00000528699 MAP3K5Q99683 1374 aa14.73□□□□□ -0.05
SIPA1-204ENST00000528699 PHKG2P15735 406 aa14.72□□□□□ -0.05
SIPA1-204ENST00000528699 FHDC1Q9C0D6 1143 aaPredicted RBP14.72□□□□□ -0.05
SIPA1-204ENST00000528699 TFCP2L1Q9NZI6 479 aa14.72□□□□□ -0.05
SIPA1-204ENST00000528699 IFNL2Q8IZJ0 200 aa14.71□□□□□ -0.05
SIPA1-204ENST00000528699 PIGBQ92521 554 aa14.71□□□□□ -0.05
SIPA1-204ENST00000528699 C4BP0C0L5 1744 aa14.7□□□□□ -0.06
SIPA1-204ENST00000528699 PER1O15534 1290 aaPredicted RBP14.7□□□□□ -0.06
SIPA1-204ENST00000528699 SMARCC1Q92922 1105 aaPredicted RBP14.7□□□□□ -0.06
SIPA1-204ENST00000528699 ARXQ96QS3 562 aa14.7□□□□□ -0.06
SIPA1-204ENST00000528699 SYT17Q9BSW7 474 aa14.7□□□□□ -0.06
SIPA1-204ENST00000528699 KDRP35968 1356 aa14.7□□□□□ -0.06
SIPA1-204ENST00000528699 AEBP1Q8IUX7 1158 aa14.68□□□□□ -0.06
SIPA1-204ENST00000528699 KDM6AO15550 1401 aaPredicted RBP14.67□□□□□ -0.06
SIPA1-204ENST00000528699 HMGB2P26583 209 aaKnown RBP14.67□□□□□ -0.06
SIPA1-204ENST00000528699 IL13P35225 146 aa14.67□□□□□ -0.06
SIPA1-204ENST00000528699 COL23A1Q86Y22 540 aaPredicted RBP14.67□□□□□ -0.06
SIPA1-204ENST00000528699 TMOD3Q9NYL9 352 aa14.67□□□□□ -0.06
SIPA1-204ENST00000528699 UBR3Q6ZT12 1888 aa14.67□□□□□ -0.06
SIPA1-204ENST00000528699 NPC1L1Q9UHC9 1359 aa14.66□□□□□ -0.06
SIPA1-204ENST00000528699 POLD1P28340 1107 aa14.66□□□□□ -0.06
SIPA1-204ENST00000528699 ZNF831Q5JPB2 1677 aa14.65□□□□□ -0.06
SIPA1-204ENST00000528699 DCAF8L1A6NGE4 600 aa14.65□□□□□ -0.06
SIPA1-204ENST00000528699 AMOTQ4VCS5 1084 aa14.65□□□□□ -0.06
SIPA1-204ENST00000528699 PLEKHO1Q53GL0 409 aaPredicted RBP14.65□□□□□ -0.06
SIPA1-204ENST00000528699 ASAP1Q9ULH1 1129 aa14.65□□□□□ -0.06
SIPA1-204ENST00000528699 LOC102724428A0A0B4J2F2 783 aa14.64□□□□□ -0.07
SIPA1-204ENST00000528699 ERVV-2B6SEH9 535 aa14.64□□□□□ -0.07
SIPA1-204ENST00000528699 HSP90AB1P08238 724 aaKnown RBP14.64□□□□□ -0.07
SIPA1-204ENST00000528699 SIK1P57059 783 aa14.64□□□□□ -0.07
SIPA1-204ENST00000528699 SULT6B1Q6IMI4 303 aa14.64□□□□□ -0.07
SIPA1-204ENST00000528699 AMIGO3Q86WK7 504 aa14.64□□□□□ -0.07
SIPA1-204ENST00000528699 FLAD1Q8NFF5 587 aa14.64□□□□□ -0.07
SIPA1-204ENST00000528699 DCAF5Q96JK2 942 aa14.64□□□□□ -0.07
SIPA1-204ENST00000528699 ATG3Q9NT62 314 aa14.64□□□□□ -0.07
SIPA1-204ENST00000528699 ZNF530Q6P9A1 599 aaPredicted RBP14.63□□□□□ -0.07
SIPA1-204ENST00000528699 LINC00116Q8NCU8 138 aa14.63□□□□□ -0.07
SIPA1-204ENST00000528699 COL3A1P02461 1466 aaPredicted RBP14.63□□□□□ -0.07
SIPA1-204ENST00000528699 MSH5O43196 834 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms